RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	GSTO1	P78417	241 aa		10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	EXOSC10	Q01780	885 aa	Known RBP	10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	KRT32	Q14532	448 aa		10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	USP17L1	Q7RTZ2	530 aa		10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	DZIP1	Q86YF9	867 aa	Known RBP	10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	TBC1D10C	Q8IV04	446 aa		10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	FBXL16	Q8N461	479 aa		10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.48	□□□□□ -0.73	5e-7	■■■□□ 17.7
UBA3-208	ENST00000465627	JAKMIP1	Q96N16	626 aa	Known RBP	10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	DAGLA	Q9Y4D2	1042 aa		10.48	□□□□□ -0.73
UBA3-208	ENST00000465627	SMIM22	K7EJ46	135 aa		10.47	□□□□□ -0.73
UBA3-208	ENST00000465627		K7ELQ4	463 aa	Predicted RBP	10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	SOX1	O00570	391 aa	Predicted RBP	10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	LDHC	P07864	332 aa		10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	VIL1	P09327	827 aa	Known RBP	10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	CAST	P20810	708 aa	Known RBP	10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	IARS	P41252	1262 aa	Known RBP	10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	HDLBP	Q00341	1268 aa	Known RBP	10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	BECN1	Q14457	450 aa		10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	HHIPL2	Q6UWX4	724 aa		10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	SDR42E1	Q8WUS8	393 aa		10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	SNX27	Q96L92	541 aa		10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	ATP8A2	Q9NTI2	1148 aa		10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	SAGE1	Q9NXZ1	904 aa		10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	SLC4A4	Q9Y6R1	1079 aa		10.47	□□□□□ -0.73
UBA3-208	ENST00000465627	CELF2	O95319	508 aa	Known RBP	10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	AK2	P54819	239 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	NOG	Q13253	232 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	CUL4A	Q13619	759 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	TOB2	Q14106	344 aa	Predicted RBP	10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	IMMT	Q16891	758 aa	Known RBP	10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	SBK1	Q52WX2	424 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	CERS3	Q8IU89	383 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	ZDHHC15	Q96MV8	337 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	NEK1	Q96PY6	1258 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	TAOK3	Q9H2K8	898 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	ZNRF3	Q9ULT6	936 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	CYP46A1	Q9Y6A2	500 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	ROBO3	Q96MS0	1386 aa		10.46	□□□□□ -0.74
UBA3-208	ENST00000465627	ZNF213	O14771	459 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	PSMA5	P28066	241 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	BTD	P43251	543 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	MCM2	P49736	904 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	ANTXR2	P58335	489 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	HAND2	P61296	217 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	CTR9	Q6PD62	1173 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	SLF2	Q8IX21	1173 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	LARGE2	Q8N3Y3	721 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	STAG1	Q8WVM7	1258 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	FAM122A	Q96E09	287 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	LRCH3	Q96II8	777 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	NAPB	Q9H115	298 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	TTF2	Q9UNY4	1162 aa	Known RBP	10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	SIPA1L1	O43166	1804 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	WDR19	Q8NEZ3	1342 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	MYH1	P12882	1939 aa		10.45	□□□□□ -0.74
UBA3-208	ENST00000465627	LAMA2	P24043	3122 aa	Known RBP	10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	PSMD14	O00487	310 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	WDHD1	O75717	1129 aa	Predicted RBP	10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	BAG3	O95817	575 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	HMGB1	P09429	215 aa	Known RBP	10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	EN2	P19622	333 aa	Predicted RBP	10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	EVC	P57679	992 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	CXCL9	Q07325	125 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	ST3GAL1	Q11201	340 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	PKN2	Q16513	984 aa	Known RBP	10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	BLOC1S2	Q6QNY1	142 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	DHX32	Q7L7V1	743 aa	Known RBP	10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	HSCB	Q8IWL3	235 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	TMC2	Q8TDI7	906 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	TMX3	Q96JJ7	454 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	HHIPL1	Q96JK4	782 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	NACAP1	Q9BZK3	213 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	PDRG1	Q9NUG6	133 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	SERPINA10	Q9UK55	444 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	NEDD4	P46934	1319 aa		10.44	□□□□□ -0.74
UBA3-208	ENST00000465627	CYP2D7	A0A087X1C5	515 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	FZD9	O00144	591 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	LARGE1	O95461	756 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	APP	P05067	770 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	CRK	P46108	304 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	KIF23	Q02241	960 aa	Predicted RBP	10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	PPARA	Q07869	468 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	AKNAD1	Q5T1N1	836 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	C12orf60	Q5U649	245 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	ZBED3	Q96IU2	234 aa	Predicted RBP	10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	INCENP	Q9NQS7	918 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	PCDHAC2	Q9Y5I4	1007 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	MYO3B	Q8WXR4	1341 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	EYS	Q5T1H1	3165 aa		10.43	□□□□□ -0.74
UBA3-208	ENST00000465627	FAM155A	B1AL88	458 aa	Predicted RBP	10.42	□□□□□ -0.74

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