RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 DDX4Q9NQI0 724 aaKnown RBP16.93■□□□□ 0.3
COL5A1-205ENST00000464187 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 NAP1L2Q9ULW6 460 aaPredicted RBP16.93■□□□□ 0.3
COL5A1-205ENST00000464187 PDE4BQ07343 736 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 LEO1Q8WVC0 666 aaPredicted RBP16.93■□□□□ 0.3
COL5A1-205ENST00000464187 TMEM87BQ96K49 555 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 SCAND2PQ9GZW5 306 aaPredicted RBP16.93■□□□□ 0.3
COL5A1-205ENST00000464187 ADAMTSL1Q8N6G6 1762 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 PSME4Q14997 1843 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 NFIAQ12857 509 aa16.92■□□□□ 0.3
COL5A1-205ENST00000464187 TNIP1Q15025 636 aa16.92■□□□□ 0.3
COL5A1-205ENST00000464187 IGDCC4Q8TDY8 1250 aa16.92■□□□□ 0.3
COL5A1-205ENST00000464187 SPATA32Q96LK8 384 aa16.92■□□□□ 0.3
COL5A1-205ENST00000464187 ZSCAN16Q9H4T2 348 aaPredicted RBP16.92■□□□□ 0.3
COL5A1-205ENST00000464187 TFIP11Q9UBB9 837 aaKnown RBP16.92■□□□□ 0.3
COL5A1-205ENST00000464187 ANGEL1Q9UNK9 670 aaKnown RBP16.92■□□□□ 0.3
COL5A1-205ENST00000464187 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL5A1-205ENST00000464187 ROBO3Q96MS0 1386 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 FZD9O00144 591 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 SH2B2O14492 632 aaPredicted RBP16.91■□□□□ 0.3
COL5A1-205ENST00000464187 RANBP6O60518 1105 aaKnown RBP16.91■□□□□ 0.3
COL5A1-205ENST00000464187 CLCN1P35523 988 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 FOSBP53539 338 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 DYNLL2Q96FJ2 89 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 PRMT6Q96LA8 375 aaPredicted RBP16.91■□□□□ 0.3
COL5A1-205ENST00000464187 FUCA2Q9BTY2 467 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 IFIT3O14879 490 aaKnown RBP16.91■□□□□ 0.3
COL5A1-205ENST00000464187 ORC4O43929 436 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 CACNB3P54284 484 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 ZKSCAN3Q9BRR0 538 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 OSBPL5Q9H0X9 879 aaPredicted RBP16.91■□□□□ 0.3
COL5A1-205ENST00000464187 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
COL5A1-205ENST00000464187 KIF3AQ9Y496 699 aa16.91■□□□□ 0.3
COL5A1-205ENST00000464187 LIG1P18858 919 aa16.9■□□□□ 0.3
COL5A1-205ENST00000464187 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
COL5A1-205ENST00000464187 SART3Q15020 963 aaKnown RBP16.9■□□□□ 0.3
COL5A1-205ENST00000464187 TMEM67Q5HYA8 995 aa16.9■□□□□ 0.3
COL5A1-205ENST00000464187 IDI2Q9BXS1 227 aa16.9■□□□□ 0.3
COL5A1-205ENST00000464187 NAV1Q8NEY1 1877 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 KLF18A0A0U1RQI7 1052 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 SPDYE6P0CI01 402 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 LMNB1P20700 586 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 CHMP4CQ96CF2 233 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 UBAC1Q9BSL1 405 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 MTA3Q9BTC8 594 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 LY9Q9HBG7 655 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 HPS5Q9UPZ3 1129 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 LAMB1P07942 1786 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 ERICH2A1L162 156 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 GOLGA8BA8MQT2 603 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 FDPSP14324 419 aaKnown RBP16.89■□□□□ 0.29
COL5A1-205ENST00000464187 YBX3P16989 372 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL5A1-205ENST00000464187 LIFRP42702 1097 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 C16orf86Q6ZW13 317 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 SLC44A5Q8NCS7 719 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 MKNK2Q9HBH9 465 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 SENP2Q9HC62 589 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 FAM198AQ9UFP1 575 aa16.89■□□□□ 0.29
COL5A1-205ENST00000464187 CDK5RAP2Q96SN8 1893 aa16.88■□□□□ 0.29
COL5A1-205ENST00000464187 DDX60LQ5H9U9 1706 aaKnown RBP16.88■□□□□ 0.29
COL5A1-205ENST00000464187 TSPY2A6NKD2 308 aa16.88■□□□□ 0.29
COL5A1-205ENST00000464187 PPFIA3O75145 1194 aa16.88■□□□□ 0.29
COL5A1-205ENST00000464187 RPS12P25398 132 aaKnown RBP16.88■□□□□ 0.29
COL5A1-205ENST00000464187 ADD1P35611 737 aaKnown RBP16.88■□□□□ 0.29
COL5A1-205ENST00000464187 TCP10Q12799 353 aa16.88■□□□□ 0.29
COL5A1-205ENST00000464187 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
COL5A1-205ENST00000464187 IQCA1Q86XH1 822 aa16.88■□□□□ 0.29
COL5A1-205ENST00000464187 PGBD1Q96JS3 809 aa16.88■□□□□ 0.29
COL5A1-205ENST00000464187 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
COL5A1-205ENST00000464187 TNKSO95271 1327 aa16.87■□□□□ 0.29
COL5A1-205ENST00000464187 WTAPQ15007 396 aa16.87■□□□□ 0.29
COL5A1-205ENST00000464187 UVSSAQ2YD98 709 aa16.87■□□□□ 0.29
COL5A1-205ENST00000464187 HS1BP3Q53T59 392 aa16.87■□□□□ 0.29
COL5A1-205ENST00000464187 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
COL5A1-205ENST00000464187 NFXL1Q6ZNB6 911 aa16.87■□□□□ 0.29
COL5A1-205ENST00000464187 ZFPM1Q8IX07 1006 aa16.87■□□□□ 0.29
COL5A1-205ENST00000464187 ZSCAN10Q96SZ4 725 aaPredicted RBP16.87■□□□□ 0.29
COL5A1-205ENST00000464187 GJA3Q9Y6H8 435 aa16.87■□□□□ 0.29
COL5A1-205ENST00000464187 ZNF541Q9H0D2 1346 aa16.87■□□□□ 0.29
COL5A1-205ENST00000464187 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
COL5A1-205ENST00000464187 CDK8P49336 464 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 NT5C2P49902 561 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 MTMR14Q8NCE2 650 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 NUP62CLQ9H1M0 184 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 SHTN1A0MZ66 631 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 GOLGA6L4A6NEF3 574 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 TFAP4Q01664 338 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 GUCY1B3Q02153 619 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 GABPAQ06546 454 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 SEC23AQ15436 765 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 APOA5Q6Q788 366 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 ZSCAN30Q86W11 494 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 RAB11FIP4Q86YS3 637 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 ZNF444Q8N0Y2 327 aaPredicted RBP16.86■□□□□ 0.29
COL5A1-205ENST00000464187 TMTC2Q8N394 836 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 DPF2Q92785 391 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 DHX36Q9H2U1 1008 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms