RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 MAPK1P28482 360 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 CD97P48960 835 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 FAAP100Q0VG06 881 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 SLC51AQ86UW1 340 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 C2CD4AQ8NCU7 369 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-204ENST00000463622 GLIS3Q8NEA6 775 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 DDX17Q92841 729 aaKnown RBP5.42□□□□□ -1.54
SCFD1-204ENST00000463622 DMRTB1Q96MA1 342 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 DNAJC25Q9H1X3 360 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 GNEQ9Y223 722 aaKnown RBP5.42□□□□□ -1.54
SCFD1-204ENST00000463622 PTPRUQ92729 1446 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 B3GALT4O96024 378 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 CYP11A1P05108 521 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 FCGRTP55899 365 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 CORO1BQ9BR76 489 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 RAD18Q9NS91 495 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 DCTN4Q9UJW0 460 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 HIF3AQ9Y2N7 669 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 MST1RQ04912 1400 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 SHPRHQ149N8 1683 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 FAM95CA0A1B0GW59 222 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 COBLO75128 1261 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 ADH5P11766 374 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 HOXA10P31260 410 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-204ENST00000463622 DYMQ7RTS9 669 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 ALKBH8Q96BT7 664 aaKnown RBP5.41□□□□□ -1.54
SCFD1-204ENST00000463622 LGR6Q9HBX8 967 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 ACTL7BQ9Y614 415 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 IVNS1ABPQ9Y6Y0 642 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 ANKRD30AQ9BXX3 1397 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 RPRD2Q5VT52 1461 aaKnown RBP5.41□□□□□ -1.54
SCFD1-204ENST00000463622 ADGRB3O60242 1522 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 SETBP1Q9Y6X0 1596 aa5.41□□□□□ -1.54
SCFD1-204ENST00000463622 ADAMTS4O75173 837 aa5.4□□□□□ -1.54
SCFD1-204ENST00000463622 ATRNO75882 1429 aa5.4□□□□□ -1.54
SCFD1-204ENST00000463622 F13BP05160 661 aa5.4□□□□□ -1.54
SCFD1-204ENST00000463622 LIG1P18858 919 aa5.4□□□□□ -1.54
SCFD1-204ENST00000463622 RAB6AP20340 208 aa5.4□□□□□ -1.54
SCFD1-204ENST00000463622 FAM50AQ14320 339 aaKnown RBP5.4□□□□□ -1.54
SCFD1-204ENST00000463622 PDE3AQ14432 1141 aa5.4□□□□□ -1.54
SCFD1-204ENST00000463622 CFAP65Q6ZU64 1925 aaKnown RBP5.4□□□□□ -1.54
SCFD1-204ENST00000463622 WDR89Q96FK6 387 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-204ENST00000463622 SETDB2Q96T68 719 aa5.4□□□□□ -1.54
SCFD1-204ENST00000463622 NLRP2Q9NX02 1062 aa5.4□□□□□ -1.54
SCFD1-204ENST00000463622 AP4E1Q9UPM8 1137 aa5.4□□□□□ -1.54
SCFD1-204ENST00000463622 CEP152O94986 1710 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 ASXL1Q8IXJ9 1541 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 PNMA6FA0A0J9YX94 578 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 NFICP08651 508 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 ADMP35318 185 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 ITGAEP38570 1179 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 PLCB3Q01970 1234 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 DSC3Q14574 896 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.4□□□□□ -1.55
SCFD1-204ENST00000463622 NXPE4Q6UWF7 544 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 DTHD1Q6ZMT9 781 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 BCO2Q9BYV7 579 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 FAM105AQ9NUU6 356 aa5.4□□□□□ -1.55
SCFD1-204ENST00000463622 CHD2O14647 1828 aaKnown RBP5.4□□□□□ -1.55
SCFD1-204ENST00000463622 PTCH1Q13635 1447 aa5.39□□□□□ -1.55
SCFD1-204ENST00000463622 PRPF40BQ6NWY9 871 aaKnown RBP5.39□□□□□ -1.55
SCFD1-204ENST00000463622 PCGF6Q9BYE7 350 aa5.39□□□□□ -1.55
SCFD1-204ENST00000463622 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-204ENST00000463622 EP400Q96L91 3159 aa5.39□□□□□ -1.55
SCFD1-204ENST00000463622 BCL9LQ86UU0 1499 aa5.39□□□□□ -1.55
SCFD1-204ENST00000463622 DAPK1P53355 1430 aa5.39□□□□□ -1.55
SCFD1-204ENST00000463622 AOC2O75106 756 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 MAPK8P45983 427 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 TRIM26Q12899 539 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-204ENST00000463622 PAOXQ6QHF9 649 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 DDX54Q8TDD1 881 aaKnown RBP5.38□□□□□ -1.55
SCFD1-204ENST00000463622 ORAI2Q96SN7 254 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 WDR18Q9BV38 432 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 CCDC86Q9H6F5 360 aaKnown RBP5.38□□□□□ -1.55
SCFD1-204ENST00000463622 GPN3Q9UHW5 284 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-204ENST00000463622 PPP1R9AQ9ULJ8 1098 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 TRAK1Q9UPV9 953 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 AKAP2Q9Y2D5 859 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 METP08581 1390 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 DYNC1LI2O43237 492 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-204ENST00000463622 TREHO43280 583 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 ASPAP45381 313 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 PTPN12Q05209 780 aaKnown RBP5.38□□□□□ -1.55
SCFD1-204ENST00000463622 DEFB132Q7Z7B7 95 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 STK35Q8TDR2 534 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 TBC1D32Q96NH3 1257 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 PSMG3-AS1Q96PY0 264 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 ATG3Q9NT62 314 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 WWC3Q9ULE0 1092 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 C1orf167Q5SNV9 1468 aa5.38□□□□□ -1.55
SCFD1-204ENST00000463622 BLMP54132 1417 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-204ENST00000463622 CROCC2H7BZ55 1655 aa5.37□□□□□ -1.55
SCFD1-204ENST00000463622 FAM170BA6NMN3 283 aa5.37□□□□□ -1.55
SCFD1-204ENST00000463622 GRIK1P39086 918 aa5.37□□□□□ -1.55
SCFD1-204ENST00000463622 OSBPL1AQ9BXW6 950 aa5.37□□□□□ -1.55
SCFD1-204ENST00000463622 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
SCFD1-204ENST00000463622 SEMA6CQ9H3T2 930 aa5.37□□□□□ -1.55
SCFD1-204ENST00000463622 PRKAG2Q9UGJ0 569 aa5.37□□□□□ -1.55
SCFD1-204ENST00000463622 TMEM131LA2VDJ0 1609 aa5.37□□□□□ -1.55
SCFD1-204ENST00000463622 KIAA1324LA8MWY0 1029 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms