RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 FAM198AQ9UFP1 575 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 KIF3AQ9Y496 699 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 NMT2O60551 498 aa22.23■■□□□ 1.15
CCDC78-206ENST00000463539 CCDC144CPQ8IYA2 1237 aa22.23■■□□□ 1.15
CCDC78-206ENST00000463539 DHX36Q9H2U1 1008 aaKnown RBP22.23■■□□□ 1.15
CCDC78-206ENST00000463539 TMOD2Q9NZR1 351 aa22.23■■□□□ 1.15
CCDC78-206ENST00000463539 SERPINB13Q9UIV8 391 aa22.23■■□□□ 1.15
CCDC78-206ENST00000463539 NID2Q14112 1375 aa22.23■■□□□ 1.15
CCDC78-206ENST00000463539 EIF6P56537 245 aaKnown RBP22.22■■□□□ 1.15
CCDC78-206ENST00000463539 TCP10Q12799 353 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 CPLX2Q6PUV4 134 aaKnown RBP22.22■■□□□ 1.15
CCDC78-206ENST00000463539 SYT17Q9BSW7 474 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 VPS37CA5D8V6 355 aaPredicted RBP22.22■■□□□ 1.15
CCDC78-206ENST00000463539 FZD9O00144 591 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 CDKL5O76039 1030 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 ZSCAN22P10073 491 aaPredicted RBP22.22■■□□□ 1.15
CCDC78-206ENST00000463539 RPS12P25398 132 aaKnown RBP22.22■■□□□ 1.15
CCDC78-206ENST00000463539 GABPAQ06546 454 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 CCDC178Q5BJE1 867 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 CLEC17AQ6ZS10 378 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 ARHGAP27Q6ZUM4 889 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 CATIPQ7Z7H3 387 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 ZFPM1Q8IX07 1006 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 SWAP70Q9UH65 585 aa22.22■■□□□ 1.15
CCDC78-206ENST00000463539 MCM4P33991 863 aa22.21■■□□□ 1.15
CCDC78-206ENST00000463539 ADD1P35611 737 aaKnown RBP22.21■■□□□ 1.15
CCDC78-206ENST00000463539 MTMR14Q8NCE2 650 aa22.21■■□□□ 1.15
CCDC78-206ENST00000463539 EHD4Q9H223 541 aa22.21■■□□□ 1.15
CCDC78-206ENST00000463539 MTMR6Q9Y217 621 aa22.21■■□□□ 1.15
CCDC78-206ENST00000463539 PPFIA3O75145 1194 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 ENTPD3O75355 529 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 CDC27P30260 824 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 RTN1Q16799 776 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 NUP133Q8WUM0 1156 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 TCP11L1Q9NUJ3 509 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 MYH1P12882 1939 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 BAG4O95429 457 aaKnown RBP22.2■■□□□ 1.14
CCDC78-206ENST00000463539 MMP14P50281 582 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 DGKHQ86XP1 1220 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 ZSCAN29Q8IWY8 852 aaPredicted RBP22.2■■□□□ 1.14
CCDC78-206ENST00000463539 IL17RBQ9NRM6 502 aa22.2■■□□□ 1.14
CCDC78-206ENST00000463539 CCDC196A0A1B0GTZ2 297 aa22.19■■□□□ 1.14
CCDC78-206ENST00000463539 FAM217BQ9NTX9 383 aaPredicted RBP22.19■■□□□ 1.14
CCDC78-206ENST00000463539 ECM29Q5VYK3 1845 aa22.19■■□□□ 1.14
CCDC78-206ENST00000463539 CLRN2A0PK11 232 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 DDAH1O94760 285 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 CALM1P0DP23 149 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 CALM2P0DP24 149 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 CALM3P0DP25 149 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 LMNB1P20700 586 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 SPDYE2Q495Y8 402 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 RCSD1Q6JBY9 416 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 FANCBQ8NB91 859 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 NEDD1Q8NHV4 660 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 MYOZ2Q9NPC6 264 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 PI4KBQ9UBF8 816 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 ZNF70Q9UC06 446 aaPredicted RBP22.18■■□□□ 1.14
CCDC78-206ENST00000463539 GJA3Q9Y6H8 435 aa22.18■■□□□ 1.14
CCDC78-206ENST00000463539 DDTLA6NHG4 134 aaPredicted RBP22.17■■□□□ 1.14
CCDC78-206ENST00000463539 DDX11L8A8MPP1 907 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 MYO1BO43795 1136 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 F13A1P00488 732 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 PPP2R5BQ15173 497 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 CRACR2BQ8N4Y2 399 aaPredicted RBP22.17■■□□□ 1.14
CCDC78-206ENST00000463539 ANP32EQ9BTT0 268 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 KAT14Q9H8E8 782 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 ORC3Q9UBD5 711 aaPredicted RBP22.17■■□□□ 1.14
CCDC78-206ENST00000463539 ATRNL1Q5VV63 1379 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 H3BQV1 296 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 FDPSP14324 419 aaKnown RBP22.17■■□□□ 1.14
CCDC78-206ENST00000463539 GMPSP49915 693 aaPredicted RBP22.17■■□□□ 1.14
CCDC78-206ENST00000463539 ZNF280AP59817 542 aaPredicted RBP22.17■■□□□ 1.14
CCDC78-206ENST00000463539 IFFO2Q5TF58 517 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 CDC37L1Q7L3B6 337 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 SH3BP5LQ7L8J4 393 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 ANKS1AQ92625 1134 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 TAOK2Q9UL54 1235 aa22.17■■□□□ 1.14
CCDC78-206ENST00000463539 COL2A1P02458 1487 aaPredicted RBP22.16■■□□□ 1.14
CCDC78-206ENST00000463539 SHMT1P34896 483 aa22.16■■□□□ 1.14
CCDC78-206ENST00000463539 TROAPQ12815 778 aa22.16■■□□□ 1.14
CCDC78-206ENST00000463539 NTRK3Q16288 839 aa22.16■■□□□ 1.14
CCDC78-206ENST00000463539 TRIM34Q9BYJ4 488 aa22.16■■□□□ 1.14
CCDC78-206ENST00000463539 STX8Q9UNK0 236 aa22.16■■□□□ 1.14
CCDC78-206ENST00000463539 ZNF541Q9H0D2 1346 aa22.16■■□□□ 1.14
CCDC78-206ENST00000463539 PLIN4Q96Q06 1357 aa22.16■■□□□ 1.14
CCDC78-206ENST00000463539 TCP10L2B9ZVM9 353 aa22.15■■□□□ 1.14
CCDC78-206ENST00000463539 GOLGA6L22H0YM25 854 aa22.15■■□□□ 1.14
CCDC78-206ENST00000463539 DPF2Q92785 391 aa22.15■■□□□ 1.14
CCDC78-206ENST00000463539 ZBED3Q96IU2 234 aaPredicted RBP22.15■■□□□ 1.14
CCDC78-206ENST00000463539 VEZTQ9HBM0 779 aa22.15■■□□□ 1.14
CCDC78-206ENST00000463539 ATP6V1DQ9Y5K8 247 aa22.15■■□□□ 1.14
CCDC78-206ENST00000463539 SHTN1A0MZ66 631 aa22.15■■□□□ 1.14
CCDC78-206ENST00000463539 IFNAR1P17181 557 aa22.15■■□□□ 1.14
CCDC78-206ENST00000463539 FKBP1CQ5VVH2 108 aa22.15■■□□□ 1.14
CCDC78-206ENST00000463539 PHKBQ93100 1093 aa22.15■■□□□ 1.14
CCDC78-206ENST00000463539 RBM28Q9NW13 759 aaKnown RBP22.15■■□□□ 1.14
CCDC78-206ENST00000463539 WNT10BO00744 389 aa22.14■■□□□ 1.13
CCDC78-206ENST00000463539 MICALL2Q8IY33 904 aa22.14■■□□□ 1.13
CCDC78-206ENST00000463539 PNMA1Q8ND90 353 aa22.14■■□□□ 1.13
CCDC78-206ENST00000463539 SRCAPQ6ZRS2 3230 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms