RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SDSP20132 328 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 SBK1Q52WX2 424 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 TTC22Q5TAA0 569 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 CCDC129Q6ZRS4 1044 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 FAM43AQ8N2R8 423 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 SLC44A5Q8NCS7 719 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 RILPL2Q969X0 211 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 DYNLL2Q96FJ2 89 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 HELLSQ9NRZ9 838 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 GINM1Q9NU53 330 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 A0A0G2JLL6 359 aaPredicted RBP21.22■□□□□ 0.99
VPS52-214ENST00000463486 BTBD19C9JJ37 291 aa21.22■□□□□ 0.99
VPS52-214ENST00000463486 TBC1D8O95759 1140 aa21.22■□□□□ 0.99
VPS52-214ENST00000463486 NMIQ13287 307 aaPredicted RBP21.22■□□□□ 0.99
VPS52-214ENST00000463486 COL13A1Q5TAT6 717 aaPredicted RBP21.22■□□□□ 0.99
VPS52-214ENST00000463486 GPAT2Q6NUI2 795 aa21.22■□□□□ 0.99
VPS52-214ENST00000463486 PRRT2Q7Z6L0 340 aaPredicted RBP21.22■□□□□ 0.99
VPS52-214ENST00000463486 IFNL3Q8IZI9 196 aa21.22■□□□□ 0.99
VPS52-214ENST00000463486 TAOK2Q9UL54 1235 aa21.22■□□□□ 0.99
VPS52-214ENST00000463486 ZBTB21Q9ULJ3 1066 aa21.22■□□□□ 0.99
VPS52-214ENST00000463486 ATAD5Q96QE3 1844 aa21.22■□□□□ 0.99
VPS52-214ENST00000463486 ALDH1A1P00352 501 aa21.21■□□□□ 0.99
VPS52-214ENST00000463486 ASNSP08243 561 aa21.21■□□□□ 0.99
VPS52-214ENST00000463486 SKAP1Q86WV1 359 aa21.21■□□□□ 0.99
VPS52-214ENST00000463486 WDR18Q9BV38 432 aa21.21■□□□□ 0.99
VPS52-214ENST00000463486 TRIM34Q9BYJ4 488 aa21.21■□□□□ 0.99
VPS52-214ENST00000463486 USP17L5A8MUK1 530 aa21.2■□□□□ 0.98
VPS52-214ENST00000463486 GH2P01242 217 aa21.2■□□□□ 0.98
VPS52-214ENST00000463486 GUCY1A2P33402 732 aa21.2■□□□□ 0.98
VPS52-214ENST00000463486 CERKLQ49MI3 558 aaPredicted RBP21.2■□□□□ 0.98
VPS52-214ENST00000463486 MCMDC2Q4G0Z9 681 aa21.2■□□□□ 0.98
VPS52-214ENST00000463486 VPS53Q5VIR6 699 aa21.2■□□□□ 0.98
VPS52-214ENST00000463486 C16orf86Q6ZW13 317 aa21.2■□□□□ 0.98
VPS52-214ENST00000463486 ZNF280CQ8ND82 737 aa21.2■□□□□ 0.98
VPS52-214ENST00000463486 ARPP21Q9UBL0 812 aaPredicted RBP21.2■□□□□ 0.98
VPS52-214ENST00000463486 PTPRFP10586 1907 aa21.19■□□□□ 0.98
VPS52-214ENST00000463486 CDK8P49336 464 aa21.19■□□□□ 0.98
VPS52-214ENST00000463486 SPP2Q13103 211 aa21.19■□□□□ 0.98
VPS52-214ENST00000463486 NOM1Q5C9Z4 860 aaKnown RBP21.19■□□□□ 0.98
VPS52-214ENST00000463486 ZNF589Q86UQ0 364 aaPredicted RBP21.19■□□□□ 0.98
VPS52-214ENST00000463486 SWAP70Q9UH65 585 aa21.19■□□□□ 0.98
VPS52-214ENST00000463486 TRIM75PA6NK02 468 aa21.18■□□□□ 0.98
VPS52-214ENST00000463486 CRHR2Q13324 411 aa21.18■□□□□ 0.98
VPS52-214ENST00000463486 ANKRD23Q86SG2 305 aa21.18■□□□□ 0.98
VPS52-214ENST00000463486 DDRGK1Q96HY6 314 aa21.18■□□□□ 0.98
VPS52-214ENST00000463486 TBC1D2Q9BYX2 928 aa21.18■□□□□ 0.98
VPS52-214ENST00000463486 ZCCHC17Q9NP64 241 aaKnown RBP21.18■□□□□ 0.98
VPS52-214ENST00000463486 ROBO3Q96MS0 1386 aa21.18■□□□□ 0.98
VPS52-214ENST00000463486 ABCB5Q2M3G0 1257 aa21.17■□□□□ 0.98
VPS52-214ENST00000463486 SH3D19Q5HYK7 790 aa21.17■□□□□ 0.98
VPS52-214ENST00000463486 OTUD7BQ6GQQ9 843 aa21.17■□□□□ 0.98
VPS52-214ENST00000463486 CASP8AP2Q9UKL3 1982 aa21.16■□□□□ 0.98
VPS52-214ENST00000463486 GPR25O00155 361 aa21.16■□□□□ 0.98
VPS52-214ENST00000463486 APPP05067 770 aa21.16■□□□□ 0.98
VPS52-214ENST00000463486 DGKZQ13574 1117 aa21.16■□□□□ 0.98
VPS52-214ENST00000463486 ALX1Q15699 326 aa21.16■□□□□ 0.98
VPS52-214ENST00000463486 CCDC136Q96JN2 1154 aa21.16■□□□□ 0.98
VPS52-214ENST00000463486 IL25Q9H293 177 aa21.16■□□□□ 0.98
VPS52-214ENST00000463486 NEFLP07196 543 aa21.15■□□□□ 0.98
VPS52-214ENST00000463486 AKR1B1P15121 316 aa21.15■□□□□ 0.98
VPS52-214ENST00000463486 TDO2P48775 406 aa21.15■□□□□ 0.98
VPS52-214ENST00000463486 BACE1P56817 501 aa21.15■□□□□ 0.98
VPS52-214ENST00000463486 FASTKD5Q7L8L6 764 aaKnown RBP21.15■□□□□ 0.98
VPS52-214ENST00000463486 SIAH1Q8IUQ4 282 aa21.15■□□□□ 0.98
VPS52-214ENST00000463486 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.15■□□□□ 0.98
VPS52-214ENST00000463486 CCDC171Q6TFL3 1326 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 ADGRA2Q96PE1 1338 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 MINDY4BA8MYZ0 360 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 PDHXO00330 501 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 HSPD1P10809 573 aaKnown RBP21.14■□□□□ 0.97
VPS52-214ENST00000463486 HMGCS2P54868 508 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 SEPT2Q15019 361 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 TREML2Q5T2D2 321 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 CWC27Q6UX04 472 aaKnown RBP21.14■□□□□ 0.97
VPS52-214ENST00000463486 AMOTL1Q8IY63 956 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 ZNF296Q8WUU4 475 aaPredicted RBP21.14■□□□□ 0.97
VPS52-214ENST00000463486 NACAP1Q9BZK3 213 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 AS3MTQ9HBK9 375 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 TACC3Q9Y6A5 838 aa21.14■□□□□ 0.97
VPS52-214ENST00000463486 HIP1O00291 1037 aa21.13■□□□□ 0.97
VPS52-214ENST00000463486 FGAP02671 866 aa21.13■□□□□ 0.97
VPS52-214ENST00000463486 MTMR2Q13614 643 aa21.13■□□□□ 0.97
VPS52-214ENST00000463486 TAF1CQ15572 869 aaPredicted RBP21.13■□□□□ 0.97
VPS52-214ENST00000463486 ERICH6BQ5W0A0 696 aa21.13■□□□□ 0.97
VPS52-214ENST00000463486 PROCA1Q8NCQ7 364 aaPredicted RBP21.13■□□□□ 0.97
VPS52-214ENST00000463486 ACER1Q8TDN7 264 aa21.13■□□□□ 0.97
VPS52-214ENST00000463486 NAPBQ9H115 298 aa21.13■□□□□ 0.97
VPS52-214ENST00000463486 EMILIN3Q9NT22 766 aa21.13■□□□□ 0.97
VPS52-214ENST00000463486 SLC45A1Q9Y2W3 748 aa21.13■□□□□ 0.97
VPS52-214ENST00000463486 LOC285556D6RIA3 1793 aa21.13■□□□□ 0.97
VPS52-214ENST00000463486 A0A1W2PRG0 241 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 USP17L10C9JJH3 530 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 RASA1P20936 1047 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 CAP1Q01518 475 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 RAB3GAP1Q15042 981 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 GADL1Q6ZQY3 521 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 CCDC17Q96LX7 622 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 CABP5Q9NP86 173 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 DIAPH3Q9NSV4 1193 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 ANAPC4Q9UJX5 808 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms