RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 CCL15-CCL14A0A0B4J2E2 113 aa19.93■□□□□ 0.78
HLA-DPA1-245ENST00000463066 TRPA1O75762 1119 aa19.93■□□□□ 0.78
HLA-DPA1-245ENST00000463066 GH2P01242 217 aa19.93■□□□□ 0.78
HLA-DPA1-245ENST00000463066 CCL15Q16663 113 aa19.93■□□□□ 0.78
HLA-DPA1-245ENST00000463066 GIMAP6Q6P9H5 292 aa19.93■□□□□ 0.78
HLA-DPA1-245ENST00000463066 TICAM2Q86XR7 235 aa19.93■□□□□ 0.78
HLA-DPA1-245ENST00000463066 KCNH4Q9UQ05 1017 aa19.93■□□□□ 0.78
HLA-DPA1-245ENST00000463066 CHMLP26374 656 aa19.92■□□□□ 0.78
HLA-DPA1-245ENST00000463066 CDK8P49336 464 aa19.92■□□□□ 0.78
HLA-DPA1-245ENST00000463066 SREBF2Q12772 1141 aa19.92■□□□□ 0.78
HLA-DPA1-245ENST00000463066 DGKZQ13574 1117 aa19.92■□□□□ 0.78
HLA-DPA1-245ENST00000463066 CERKLQ49MI3 558 aaPredicted RBP19.92■□□□□ 0.78
HLA-DPA1-245ENST00000463066 IFNL1Q8IU54 200 aa19.92■□□□□ 0.78
HLA-DPA1-245ENST00000463066 NAPBQ9H115 298 aa19.92■□□□□ 0.78
HLA-DPA1-245ENST00000463066 AFG3L2Q9Y4W6 797 aa19.92■□□□□ 0.78
HLA-DPA1-245ENST00000463066 DOCK1Q14185 1865 aa19.92■□□□□ 0.78
HLA-DPA1-245ENST00000463066 TESPA1A2RU30 521 aaPredicted RBP19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 TRIM75PA6NK02 468 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 HSPD1P10809 573 aaKnown RBP19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 HSPA8P11142 646 aaKnown RBP19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 AKR1B1P15121 316 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 GUCY1A2P33402 732 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 GTF2A2P52657 109 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 SPP2Q13103 211 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 SNAPC2Q13487 334 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 MOGSQ13724 837 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 C16orf86Q6ZW13 317 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 AMOTL1Q8IY63 956 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 NACAP1Q9BZK3 213 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 R3HDMLQ9H3Y0 253 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 TACC3Q9Y6A5 838 aa19.91■□□□□ 0.78
HLA-DPA1-245ENST00000463066 USP17L5A8MUK1 530 aa19.9■□□□□ 0.78
HLA-DPA1-245ENST00000463066 HIP1O00291 1037 aa19.9■□□□□ 0.78
HLA-DPA1-245ENST00000463066 PRDM1O75626 825 aa19.9■□□□□ 0.78
HLA-DPA1-245ENST00000463066 ABCB5Q2M3G0 1257 aa19.9■□□□□ 0.78
HLA-DPA1-245ENST00000463066 CLEC10AQ8IUN9 316 aa19.9■□□□□ 0.78
HLA-DPA1-245ENST00000463066 FAM43AQ8N2R8 423 aa19.9■□□□□ 0.78
HLA-DPA1-245ENST00000463066 BEGAINQ9BUH8 593 aa19.9■□□□□ 0.78
HLA-DPA1-245ENST00000463066 INCENPQ9NQS7 918 aa19.9■□□□□ 0.78
HLA-DPA1-245ENST00000463066 BTBD19C9JJ37 291 aa19.89■□□□□ 0.77
HLA-DPA1-245ENST00000463066 TBC1D8O95759 1140 aa19.89■□□□□ 0.77
HLA-DPA1-245ENST00000463066 ASNSP08243 561 aa19.89■□□□□ 0.77
HLA-DPA1-245ENST00000463066 CETPP11597 493 aa19.89■□□□□ 0.77
HLA-DPA1-245ENST00000463066 CTDSPL2Q05D32 466 aa19.89■□□□□ 0.77
HLA-DPA1-245ENST00000463066 PPARAQ07869 468 aa19.89■□□□□ 0.77
HLA-DPA1-245ENST00000463066 SEPT2Q15019 361 aa19.89■□□□□ 0.77
HLA-DPA1-245ENST00000463066 REM2Q8IYK8 340 aaPredicted RBP19.89■□□□□ 0.77
HLA-DPA1-245ENST00000463066 SWAP70Q9UH65 585 aa19.89■□□□□ 0.77
HLA-DPA1-245ENST00000463066 ROBO3Q96MS0 1386 aa19.88■□□□□ 0.77
HLA-DPA1-245ENST00000463066 MPHOSPH10O00566 681 aaKnown RBP19.88■□□□□ 0.77
HLA-DPA1-245ENST00000463066 CXCL11O14625 94 aa19.88■□□□□ 0.77
HLA-DPA1-245ENST00000463066 FGAP02671 866 aa19.88■□□□□ 0.77
HLA-DPA1-245ENST00000463066 LBX1P52954 281 aa19.88■□□□□ 0.77
HLA-DPA1-245ENST00000463066 RAB3GAP1Q15042 981 aa19.88■□□□□ 0.77
HLA-DPA1-245ENST00000463066 ALX1Q15699 326 aa19.88■□□□□ 0.77
HLA-DPA1-245ENST00000463066 BMP2KLQ5H9B9 411 aa19.88■□□□□ 0.77
HLA-DPA1-245ENST00000463066 ZNF280CQ8ND82 737 aa19.88■□□□□ 0.77
HLA-DPA1-245ENST00000463066 A0A0G2JLL6 359 aaPredicted RBP19.87■□□□□ 0.77
HLA-DPA1-245ENST00000463066 RASA1P20936 1047 aa19.87■□□□□ 0.77
HLA-DPA1-245ENST00000463066 INHBEP58166 350 aa19.87■□□□□ 0.77
HLA-DPA1-245ENST00000463066 HAND2P61296 217 aa19.87■□□□□ 0.77
HLA-DPA1-245ENST00000463066 GPAT2Q6NUI2 795 aa19.87■□□□□ 0.77
HLA-DPA1-245ENST00000463066 GADL1Q6ZQY3 521 aa19.87■□□□□ 0.77
HLA-DPA1-245ENST00000463066 PRRT2Q7Z6L0 340 aaPredicted RBP19.87■□□□□ 0.77
HLA-DPA1-245ENST00000463066 ACER1Q8TDN7 264 aa19.87■□□□□ 0.77
HLA-DPA1-245ENST00000463066 WDR18Q9BV38 432 aa19.87■□□□□ 0.77
HLA-DPA1-245ENST00000463066 PHIPQ8WWQ0 1821 aa19.86■□□□□ 0.77
HLA-DPA1-245ENST00000463066 ATAD5Q96QE3 1844 aa19.86■□□□□ 0.77
HLA-DPA1-245ENST00000463066 CTCFP49711 727 aaPredicted RBP19.86■□□□□ 0.77
HLA-DPA1-245ENST00000463066 HMGCS2P54868 508 aa19.86■□□□□ 0.77
HLA-DPA1-245ENST00000463066 MTMR2Q13614 643 aa19.86■□□□□ 0.77
HLA-DPA1-245ENST00000463066 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.86■□□□□ 0.77
HLA-DPA1-245ENST00000463066 NBPF3Q9H094 633 aa19.86■□□□□ 0.77
HLA-DPA1-245ENST00000463066 CABP5Q9NP86 173 aa19.86■□□□□ 0.77
HLA-DPA1-245ENST00000463066 PTH1RQ03431 593 aa19.85■□□□□ 0.77
HLA-DPA1-245ENST00000463066 MKNK2Q9HBH9 465 aa19.85■□□□□ 0.77
HLA-DPA1-245ENST00000463066 AS3MTQ9HBK9 375 aa19.85■□□□□ 0.77
HLA-DPA1-245ENST00000463066 GINM1Q9NU53 330 aa19.85■□□□□ 0.77
HLA-DPA1-245ENST00000463066 SAGE1Q9NXZ1 904 aa19.85■□□□□ 0.77
HLA-DPA1-245ENST00000463066 A0A1W2PRG0 241 aa19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 SGSM2O43147 1006 aa19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 CA12O43570 354 aa19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 MFAP1P55081 439 aaKnown RBP19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 CRHR2Q13324 411 aa19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 ZYXQ15942 572 aaKnown RBP19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 TREML2Q5T2D2 321 aa19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 SIAH1Q8IUQ4 282 aa19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 NKX2-3Q8TAU0 364 aa19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.84■□□□□ 0.77
HLA-DPA1-245ENST00000463066 LAMB1P07942 1786 aa19.83■□□□□ 0.77
HLA-DPA1-245ENST00000463066 RAD50Q92878 1312 aa19.83■□□□□ 0.77
HLA-DPA1-245ENST00000463066 PDHXO00330 501 aa19.83■□□□□ 0.77
HLA-DPA1-245ENST00000463066 TAF1CQ15572 869 aaPredicted RBP19.83■□□□□ 0.77
HLA-DPA1-245ENST00000463066 FAM47AQ5JRC9 791 aa19.83■□□□□ 0.77
HLA-DPA1-245ENST00000463066 TMEM179Q6ZVK1 233 aa19.83■□□□□ 0.77
HLA-DPA1-245ENST00000463066 ANKRD23Q86SG2 305 aa19.83■□□□□ 0.77
HLA-DPA1-245ENST00000463066 TBC1D10CQ8IV04 446 aa19.83■□□□□ 0.77
HLA-DPA1-245ENST00000463066 CCDC17Q96LX7 622 aa19.83■□□□□ 0.77
HLA-DPA1-245ENST00000463066 BACE1P56817 501 aa19.82■□□□□ 0.76
HLA-DPA1-245ENST00000463066 OTUD7BQ6GQQ9 843 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms