RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 MCOLN1Q9GZU1 580 aa22.66■■□□□ 1.22
COL9A3-203ENST00000462700 ZBTB21Q9ULJ3 1066 aa22.66■■□□□ 1.22
COL9A3-203ENST00000462700 ATAD5Q96QE3 1844 aa22.66■■□□□ 1.22
COL9A3-203ENST00000462700 PDHXO00330 501 aa22.65■■□□□ 1.22
COL9A3-203ENST00000462700 CYP2D6P10635 497 aa22.65■■□□□ 1.22
COL9A3-203ENST00000462700 SPP2Q13103 211 aa22.65■■□□□ 1.22
COL9A3-203ENST00000462700 CTU1Q7Z7A3 348 aaKnown RBP22.65■■□□□ 1.22
COL9A3-203ENST00000462700 AS3MTQ9HBK9 375 aa22.65■■□□□ 1.22
COL9A3-203ENST00000462700 M0R2C6 588 aa22.64■■□□□ 1.21
COL9A3-203ENST00000462700 SHMT1P34896 483 aa22.64■■□□□ 1.21
COL9A3-203ENST00000462700 GADL1Q6ZQY3 521 aa22.64■■□□□ 1.21
COL9A3-203ENST00000462700 EVI5LQ96CN4 794 aa22.64■■□□□ 1.21
COL9A3-203ENST00000462700 DDRGK1Q96HY6 314 aa22.64■■□□□ 1.21
COL9A3-203ENST00000462700 WDR18Q9BV38 432 aa22.64■■□□□ 1.21
COL9A3-203ENST00000462700 GPAA1O43292 621 aa22.63■■□□□ 1.21
COL9A3-203ENST00000462700 TLR2O60603 784 aa22.63■■□□□ 1.21
COL9A3-203ENST00000462700 GH2P01242 217 aa22.63■■□□□ 1.21
COL9A3-203ENST00000462700 CERKLQ49MI3 558 aaPredicted RBP22.63■■□□□ 1.21
COL9A3-203ENST00000462700 PLEKHM2Q8IWE5 1019 aa22.63■■□□□ 1.21
COL9A3-203ENST00000462700 USP17L12C9JPN9 530 aa22.62■■□□□ 1.21
COL9A3-203ENST00000462700 USP17L21D6R901 530 aa22.62■■□□□ 1.21
COL9A3-203ENST00000462700 SP3Q02447 781 aa22.62■■□□□ 1.21
COL9A3-203ENST00000462700 ZMYM1Q5SVZ6 1142 aa22.62■■□□□ 1.21
COL9A3-203ENST00000462700 C12orf60Q5U649 245 aa22.62■■□□□ 1.21
COL9A3-203ENST00000462700 AMOTL1Q8IY63 956 aa22.62■■□□□ 1.21
COL9A3-203ENST00000462700 SEC62Q99442 399 aaKnown RBP22.62■■□□□ 1.21
COL9A3-203ENST00000462700 OSBPL3Q9H4L5 887 aa22.62■■□□□ 1.21
COL9A3-203ENST00000462700 TAOK2Q9UL54 1235 aa22.62■■□□□ 1.21
COL9A3-203ENST00000462700 GSG1L2A8MUP6 293 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 GNAT2P19087 354 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 SH3D19Q5HYK7 790 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 CTR9Q6PD62 1173 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 PROCA1Q8NCQ7 364 aaPredicted RBP22.61■■□□□ 1.21
COL9A3-203ENST00000462700 DYNLL2Q96FJ2 89 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 ERO1AQ96HE7 468 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 ABHD8Q96I13 439 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 PARK7Q99497 189 aaKnown RBP22.61■■□□□ 1.21
COL9A3-203ENST00000462700 SWAP70Q9UH65 585 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 AGTPBP1Q9UPW5 1226 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 SLC45A1Q9Y2W3 748 aa22.61■■□□□ 1.21
COL9A3-203ENST00000462700 ADGRA2Q96PE1 1338 aa22.6■■□□□ 1.21
COL9A3-203ENST00000462700 CYP2D7A0A087X1C5 515 aa22.6■■□□□ 1.21
COL9A3-203ENST00000462700 HMGCS2P54868 508 aa22.6■■□□□ 1.21
COL9A3-203ENST00000462700 MTMR2Q13614 643 aa22.6■■□□□ 1.21
COL9A3-203ENST00000462700 ABCB5Q2M3G0 1257 aa22.6■■□□□ 1.21
COL9A3-203ENST00000462700 GIMAP6Q6P9H5 292 aa22.6■■□□□ 1.21
COL9A3-203ENST00000462700 SLC44A5Q8NCS7 719 aa22.6■■□□□ 1.21
COL9A3-203ENST00000462700 CD99L2Q8TCZ2 262 aa22.6■■□□□ 1.21
COL9A3-203ENST00000462700 ARPP21Q9UBL0 812 aaPredicted RBP22.6■■□□□ 1.21
COL9A3-203ENST00000462700 PTPRFP10586 1907 aa22.6■■□□□ 1.21
COL9A3-203ENST00000462700 SMIM22K7EJ46 135 aa22.59■■□□□ 1.21
COL9A3-203ENST00000462700 BACE1P56817 501 aa22.59■■□□□ 1.21
COL9A3-203ENST00000462700 TREML2Q5T2D2 321 aa22.59■■□□□ 1.21
COL9A3-203ENST00000462700 EPB41L4AQ9HCS5 686 aaPredicted RBP22.59■■□□□ 1.21
COL9A3-203ENST00000462700 CABP5Q9NP86 173 aa22.59■■□□□ 1.21
COL9A3-203ENST00000462700 TRIM6-TRIM34B2RNG4 842 aa22.58■■□□□ 1.21
COL9A3-203ENST00000462700 CYP2C8P10632 490 aa22.58■■□□□ 1.21
COL9A3-203ENST00000462700 RAB3GAP1Q15042 981 aa22.58■■□□□ 1.21
COL9A3-203ENST00000462700 PKN2Q16513 984 aaKnown RBP22.58■■□□□ 1.21
COL9A3-203ENST00000462700 SBK1Q52WX2 424 aa22.58■■□□□ 1.21
COL9A3-203ENST00000462700 C17orf99Q6UX52 265 aa22.58■■□□□ 1.21
COL9A3-203ENST00000462700 C16orf86Q6ZW13 317 aa22.58■■□□□ 1.21
COL9A3-203ENST00000462700 LOC285556D6RIA3 1793 aa22.58■■□□□ 1.2
COL9A3-203ENST00000462700 USP17L10C9JJH3 530 aa22.57■■□□□ 1.2
COL9A3-203ENST00000462700 TICAM2Q86XR7 235 aa22.57■■□□□ 1.2
COL9A3-203ENST00000462700 CPA4Q9UI42 421 aa22.57■■□□□ 1.2
COL9A3-203ENST00000462700 BAZ2AQ9UIF9 1905 aaKnown RBP22.57■■□□□ 1.2
COL9A3-203ENST00000462700 C19orf81C9J6K1 198 aa22.56■■□□□ 1.2
COL9A3-203ENST00000462700 PATL2C9JE40 543 aaKnown RBP22.56■■□□□ 1.2
COL9A3-203ENST00000462700 GUCY1A2P33402 732 aa22.56■■□□□ 1.2
COL9A3-203ENST00000462700 CDK8P49336 464 aa22.56■■□□□ 1.2
COL9A3-203ENST00000462700 CAP1Q01518 475 aa22.56■■□□□ 1.2
COL9A3-203ENST00000462700 OTOP1Q7RTM1 612 aa22.56■■□□□ 1.2
COL9A3-203ENST00000462700 RILPL2Q969X0 211 aa22.56■■□□□ 1.2
COL9A3-203ENST00000462700 TRIM17Q9Y577 477 aa22.56■■□□□ 1.2
COL9A3-203ENST00000462700 MPHOSPH10O00566 681 aaKnown RBP22.55■■□□□ 1.2
COL9A3-203ENST00000462700 CAPN15O75808 1086 aa22.55■■□□□ 1.2
COL9A3-203ENST00000462700 APPP05067 770 aa22.55■■□□□ 1.2
COL9A3-203ENST00000462700 PDE4AP27815 886 aa22.55■■□□□ 1.2
COL9A3-203ENST00000462700 TDO2P48775 406 aa22.55■■□□□ 1.2
COL9A3-203ENST00000462700 IFNL3Q8IZI9 196 aa22.55■■□□□ 1.2
COL9A3-203ENST00000462700 TMOD4Q9NZQ9 345 aa22.55■■□□□ 1.2
COL9A3-203ENST00000462700 PNMA3Q9UL41 463 aa22.55■■□□□ 1.2
COL9A3-203ENST00000462700 ROBO3Q96MS0 1386 aa22.54■■□□□ 1.2
COL9A3-203ENST00000462700 LACTBP83111 547 aaPredicted RBP22.54■■□□□ 1.2
COL9A3-203ENST00000462700 PABPC4Q13310 644 aaKnown RBP eCLIP22.54■■□□□ 1.2
COL9A3-203ENST00000462700 SEPT2Q15019 361 aa22.54■■□□□ 1.2
COL9A3-203ENST00000462700 CCDC129Q6ZRS4 1044 aa22.54■■□□□ 1.2
COL9A3-203ENST00000462700 TMEM179Q6ZVK1 233 aa22.54■■□□□ 1.2
COL9A3-203ENST00000462700 NACAP1Q9BZK3 213 aa22.54■■□□□ 1.2
COL9A3-203ENST00000462700 EFCC1Q9HA90 598 aa22.54■■□□□ 1.2
COL9A3-203ENST00000462700 HELLSQ9NRZ9 838 aa22.54■■□□□ 1.2
COL9A3-203ENST00000462700 MINDY4BA8MYZ0 360 aa22.53■■□□□ 1.2
COL9A3-203ENST00000462700 BCRP11274 1271 aa22.53■■□□□ 1.2
COL9A3-203ENST00000462700 AKR1B1P15121 316 aa22.53■■□□□ 1.2
COL9A3-203ENST00000462700 FBXO46Q6PJ61 603 aaPredicted RBP22.53■■□□□ 1.2
COL9A3-203ENST00000462700 USP17L2Q6R6M4 530 aa22.53■■□□□ 1.2
COL9A3-203ENST00000462700 SMCR8Q8TEV9 937 aaPredicted RBP22.53■■□□□ 1.2
COL9A3-203ENST00000462700 CCDC17Q96LX7 622 aa22.53■■□□□ 1.2
COL9A3-203ENST00000462700 FAM227BQ96M60 508 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms