RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ADCY9O60503 1353 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 CARMIL3Q8ND23 1372 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 SPATA31C1P0DKV0 1188 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 CANXP27824 592 aaKnown RBP7.39□□□□□ -1.23
VPS36-202ENST00000462289 RFC4P35249 363 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 EXOSC9Q06265 439 aaKnown RBP7.39□□□□□ -1.23
VPS36-202ENST00000462289 TYRO3Q06418 890 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 CCDC30Q5VVM6 783 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 USPL1Q5W0Q7 1092 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 TTLL7Q6ZT98 887 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 C2orf49Q9BVC5 232 aaPredicted RBP7.39□□□□□ -1.23
VPS36-202ENST00000462289 PLVAPQ9BX97 442 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 BRD7Q9NPI1 651 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 CD2APQ9Y5K6 639 aa7.39□□□□□ -1.23
VPS36-202ENST00000462289 MAFBQ9Y5Q3 323 aaPredicted RBP7.39□□□□□ -1.23
VPS36-202ENST00000462289 SNED1Q8TER0 1413 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 RNF123Q5XPI4 1314 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 UBN2Q6ZU65 1347 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 SFI1A8K8P3 1242 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 MMP10P09238 476 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 PIP4K2AP48426 406 aaPredicted RBP7.38□□□□□ -1.23
VPS36-202ENST00000462289 SPEM2Q0P670 501 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 COL9A3Q14050 684 aaPredicted RBP7.38□□□□□ -1.23
VPS36-202ENST00000462289 HLFQ16534 295 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 TBC1D9BQ66K14 1250 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 PLBD2Q8NHP8 589 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 CLUAP1Q96AJ1 413 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 ZNF594Q96JF6 807 aaPredicted RBP7.38□□□□□ -1.23
VPS36-202ENST00000462289 HSH2DQ96JZ2 352 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 ARXQ96QS3 562 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 ISCA1Q9BUE6 129 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 CHD4Q14839 1912 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 SBF1O95248 1867 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 FER1L6Q2WGJ9 1857 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 LRRC37AA6NMS7 1700 aa7.38□□□□□ -1.23
VPS36-202ENST00000462289 ANXA1P04083 346 aa7.37□□□□□ -1.23
VPS36-202ENST00000462289 FURINP09958 794 aa7.37□□□□□ -1.23
VPS36-202ENST00000462289 ALDH1L2Q3SY69 923 aa7.37□□□□□ -1.23
VPS36-202ENST00000462289 COPS6Q7L5N1 327 aa7.37□□□□□ -1.23
VPS36-202ENST00000462289 ALDH16A1Q8IZ83 802 aa7.37□□□□□ -1.23
VPS36-202ENST00000462289 ZNF280CQ8ND82 737 aa7.37□□□□□ -1.23
VPS36-202ENST00000462289 XAGE3Q8WTP9 111 aa7.37□□□□□ -1.23
VPS36-202ENST00000462289 TFIP11Q9UBB9 837 aaKnown RBP7.37□□□□□ -1.23
VPS36-202ENST00000462289 STARD13Q9Y3M8 1113 aa7.37□□□□□ -1.23
VPS36-202ENST00000462289 LAS1LQ9Y4W2 734 aaKnown RBP7.37□□□□□ -1.23
VPS36-202ENST00000462289 LTBP1Q14766 1721 aa7.37□□□□□ -1.23
VPS36-202ENST00000462289 PPP1R12BO60237 982 aaPredicted RBP7.36□□□□□ -1.23
VPS36-202ENST00000462289 NTSR2O95665 410 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 EIF2S2P20042 333 aaKnown RBP7.36□□□□□ -1.23
VPS36-202ENST00000462289 RASA1P20936 1047 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 KCNA3P22001 575 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 SEC13P55735 322 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 TCIRG1Q13488 830 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 TMEM132AQ24JP5 1023 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 CRY2Q49AN0 593 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 SLC10A5Q5PT55 438 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 MSL1Q68DK7 614 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 PRR5LQ6MZQ0 368 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 G2E3Q7L622 706 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 CEP63Q96MT8 703 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 SYT17Q9BSW7 474 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 PHAXQ9H814 394 aaKnown RBP7.36□□□□□ -1.23
VPS36-202ENST00000462289 KCNH4Q9UQ05 1017 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 ZNF652Q9Y2D9 606 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 RBM19Q9Y4C8 960 aaKnown RBP7.36□□□□□ -1.23
VPS36-202ENST00000462289 DICER1Q9UPY3 1922 aaKnown RBP7.36□□□□□ -1.23
VPS36-202ENST00000462289 SLX4Q8IY92 1834 aa7.36□□□□□ -1.23
VPS36-202ENST00000462289 CACNA1SQ13698 1873 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 SPDYE3A6NKU9 549 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 M0R082 166 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 ELL2O00472 640 aaPredicted RBP7.35□□□□□ -1.23
VPS36-202ENST00000462289 MYL6BP14649 208 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 POLD1P28340 1107 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 TGFB2P61812 414 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 HNRNPUQ00839 825 aaKnown RBP eCLIP7.35□□□□□ -1.23
VPS36-202ENST00000462289 HIF1AQ16665 826 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 PARP10Q53GL7 1025 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 HSP90AB3PQ58FF7 597 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 KSR2Q6VAB6 950 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 NLRP10Q86W26 655 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 MICALL1Q8N3F8 863 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 ZNF417Q8TAU3 575 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 ZNF587Q96SQ5 575 aaPredicted RBP7.35□□□□□ -1.23
VPS36-202ENST00000462289 METTL22Q9BUU2 404 aaPredicted RBP7.35□□□□□ -1.23
VPS36-202ENST00000462289 EFCC1Q9HA90 598 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 A0A1B0GUL6 1792 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 COL4A1P02462 1669 aa7.35□□□□□ -1.23
VPS36-202ENST00000462289 TAF1P21675 1872 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 ABCC12Q96J65 1359 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 ALBP02768 609 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 SERPINB2P05120 415 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 IGKV5-2P06315 115 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 ADH7P40394 386 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 RARSP54136 660 aaKnown RBP7.34□□□□□ -1.23
VPS36-202ENST00000462289 CASP7P55210 303 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 PTK7Q13308 1070 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 IER5Q5VY09 327 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 KIF6Q6ZMV9 814 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms