RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 PANX2Q96RD6 677 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 CSRNP2Q9H175 543 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 CCDC151A5D8V7 595 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 STX17P56962 302 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 IFNL3Q8IZI9 196 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 NAPBQ9H115 298 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 TBC1D2BQ9UPU7 963 aa21.03■□□□□ 0.96
HPS3-204ENST00000462030 KLHL10Q6JEL2 608 aa21.02■□□□□ 0.96
HPS3-204ENST00000462030 SRGAP1Q7Z6B7 1085 aa21.02■□□□□ 0.96
HPS3-204ENST00000462030 SPATA20Q8TB22 786 aa21.02■□□□□ 0.96
HPS3-204ENST00000462030 FOXP1Q9H334 677 aaPredicted RBP21.02■□□□□ 0.96
HPS3-204ENST00000462030 SRPRBQ9Y5M8 271 aaKnown RBP21.02■□□□□ 0.96
HPS3-204ENST00000462030 CD44P16070 742 aaKnown RBP21.02■□□□□ 0.96
HPS3-204ENST00000462030 GPTP24298 496 aa21.02■□□□□ 0.96
HPS3-204ENST00000462030 CASP1P29466 404 aa21.02■□□□□ 0.96
HPS3-204ENST00000462030 RTN1Q16799 776 aa21.02■□□□□ 0.96
HPS3-204ENST00000462030 RRP12Q5JTH9 1297 aaKnown RBP21.02■□□□□ 0.96
HPS3-204ENST00000462030 IGSF22Q8N9C0 903 aa21.02■□□□□ 0.96
HPS3-204ENST00000462030 ZNF579Q8NAF0 562 aaKnown RBP21.02■□□□□ 0.96
HPS3-204ENST00000462030 ANKZF1Q9H8Y5 726 aa21.02■□□□□ 0.96
HPS3-204ENST00000462030 TNS2Q63HR2 1409 aa21.01■□□□□ 0.95
HPS3-204ENST00000462030 A0A087X0B3 334 aa21.01■□□□□ 0.95
HPS3-204ENST00000462030 MBD4O95243 580 aa21.01■□□□□ 0.95
HPS3-204ENST00000462030 ERCC5P28715 1186 aaPredicted RBP21.01■□□□□ 0.95
HPS3-204ENST00000462030 TRIM22Q8IYM9 498 aa21.01■□□□□ 0.95
HPS3-204ENST00000462030 ZBTB9Q96C00 473 aa21.01■□□□□ 0.95
HPS3-204ENST00000462030 ALX1Q15699 326 aa21.01■□□□□ 0.95
HPS3-204ENST00000462030 JAKMIP3Q5VZ66 844 aa21.01■□□□□ 0.95
HPS3-204ENST00000462030 ARMT1Q9H993 441 aa21.01■□□□□ 0.95
HPS3-204ENST00000462030 NID2Q14112 1375 aa21■□□□□ 0.95
HPS3-204ENST00000462030 PATL2C9JE40 543 aaKnown RBP21■□□□□ 0.95
HPS3-204ENST00000462030 MAP2K7O14733 419 aa21■□□□□ 0.95
HPS3-204ENST00000462030 TFRCP02786 760 aaKnown RBP21■□□□□ 0.95
HPS3-204ENST00000462030 AFMP43652 599 aa21■□□□□ 0.95
HPS3-204ENST00000462030 GPS2Q13227 327 aa21■□□□□ 0.95
HPS3-204ENST00000462030 BRD3Q15059 726 aa21■□□□□ 0.95
HPS3-204ENST00000462030 KIF6Q6ZMV9 814 aa21■□□□□ 0.95
HPS3-204ENST00000462030 CABP5Q9NP86 173 aa21■□□□□ 0.95
HPS3-204ENST00000462030 TOMM22Q9NS69 142 aa21■□□□□ 0.95
HPS3-204ENST00000462030 SYNRGQ9UMZ2 1314 aa21■□□□□ 0.95
HPS3-204ENST00000462030 FAM205CA6NFA0 338 aa21■□□□□ 0.95
HPS3-204ENST00000462030 ARID4AP29374 1257 aaPredicted RBP21■□□□□ 0.95
HPS3-204ENST00000462030 MUM1L1Q5H9M0 696 aa21■□□□□ 0.95
HPS3-204ENST00000462030 AKNAD1Q5T1N1 836 aa21■□□□□ 0.95
HPS3-204ENST00000462030 KANK3Q6NY19 840 aa21■□□□□ 0.95
HPS3-204ENST00000462030 PPFIBP1Q86W92 1011 aa21■□□□□ 0.95
HPS3-204ENST00000462030 PNKPQ96T60 521 aa21■□□□□ 0.95
HPS3-204ENST00000462030 ADAM21Q9UKJ8 722 aa21■□□□□ 0.95
HPS3-204ENST00000462030 TNS3Q68CZ2 1445 aa21■□□□□ 0.95
HPS3-204ENST00000462030 ANKRD18BA2A2Z9 1011 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 PDE8BO95263 885 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 PBX1P40424 430 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 SMYD4Q8IYR2 804 aaPredicted RBP20.99■□□□□ 0.95
HPS3-204ENST00000462030 MAGEB6Q8N7X4 407 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 ADD3Q9UEY8 706 aaKnown RBP20.99■□□□□ 0.95
HPS3-204ENST00000462030 CDC23Q9UJX2 597 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 MYH8P13535 1937 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 PRKAB2O43741 272 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 KIF5CO60282 957 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 CTSWP56202 376 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 CUL4BQ13620 913 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 HLFQ16534 295 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 ZNF569Q5MCW4 686 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 SPATA1Q5VX52 437 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 CRACR2BQ8N4Y2 399 aaPredicted RBP20.99■□□□□ 0.95
HPS3-204ENST00000462030 EPSTI1Q96J88 318 aa20.99■□□□□ 0.95
HPS3-204ENST00000462030 TIAM2Q8IVF5 1701 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 MFAP3LO75121 409 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 DEXIO95424 95 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 WTAPQ15007 396 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 ZSCAN26Q16670 478 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 MFSD6Q6ZSS7 791 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 TOM1L2Q6ZVM7 507 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 HELBQ8NG08 1087 aaPredicted RBP20.98■□□□□ 0.95
HPS3-204ENST00000462030 SHISA4Q96DD7 197 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 STRN4Q9NRL3 753 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 MYH6P13533 1939 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 CASP14P31944 242 aa20.98■□□□□ 0.95
HPS3-204ENST00000462030 BEND6Q5SZJ8 279 aaPredicted RBP20.98■□□□□ 0.95
HPS3-204ENST00000462030 NAA15Q9BXJ9 866 aaKnown RBP20.98■□□□□ 0.95
HPS3-204ENST00000462030 CDHR2Q9BYE9 1310 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 GSG1L2A8MUP6 293 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 ABL1P00519 1130 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 ATF3P18847 181 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 LMAN1P49257 510 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 MCM6Q14566 821 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 DNAJC10Q8IXB1 793 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 NUP133Q8WUM0 1156 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 KRT23Q9C075 422 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 CNNM2Q9H8M5 875 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 SUGCTQ9HAC7 445 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 PDE11AQ9HCR9 933 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 CEP131Q9UPN4 1083 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 MYH3P11055 1940 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 CDKAL1Q5VV42 579 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 RASGRP2Q7LDG7 609 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 NLRP10Q86W26 655 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 CEP112Q8N8E3 955 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 ACRBPQ8NEB7 543 aa20.97■□□□□ 0.95
HPS3-204ENST00000462030 EXOC4Q96A65 974 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms