RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 USP17L5A8MUK1 530 aa18.79■□□□□ 0.6
SF3A3-203ENST00000461869 HMGCRP04035 888 aa18.79■□□□□ 0.6
SF3A3-203ENST00000461869 PI16Q6UXB8 463 aa18.79■□□□□ 0.6
SF3A3-203ENST00000461869 SKAP1Q86WV1 359 aa18.79■□□□□ 0.6
SF3A3-203ENST00000461869 ASCC2Q9H1I8 757 aaPredicted RBP18.79■□□□□ 0.6
SF3A3-203ENST00000461869 RAI14Q9P0K7 980 aa18.79■□□□□ 0.6
SF3A3-203ENST00000461869 CEP290O15078 2479 aa18.79■□□□□ 0.6
SF3A3-203ENST00000461869 RRP1BQ14684 758 aaKnown RBP18.78■□□□□ 0.6
SF3A3-203ENST00000461869 TEX11Q8IYF3 940 aa18.78■□□□□ 0.6
SF3A3-203ENST00000461869 ANKLE1Q8NAG6 615 aa18.78■□□□□ 0.6
SF3A3-203ENST00000461869 AS3MTQ9HBK9 375 aa18.78■□□□□ 0.6
SF3A3-203ENST00000461869 GJD2Q9UKL4 321 aa18.78■□□□□ 0.6
SF3A3-203ENST00000461869 COL2A1P02458 1487 aaPredicted RBP18.77■□□□□ 0.6
SF3A3-203ENST00000461869 RPTORQ8N122 1335 aa18.77■□□□□ 0.6
SF3A3-203ENST00000461869 SOX1O00570 391 aaPredicted RBP18.77■□□□□ 0.6
SF3A3-203ENST00000461869 SH3D19Q5HYK7 790 aa18.77■□□□□ 0.6
SF3A3-203ENST00000461869 CLASRPQ8N2M8 674 aaKnown RBP18.77■□□□□ 0.6
SF3A3-203ENST00000461869 HMX1Q9NP08 348 aaPredicted RBP18.77■□□□□ 0.6
SF3A3-203ENST00000461869 LRP2BPQ9P2M1 347 aa18.77■□□□□ 0.6
SF3A3-203ENST00000461869 HERC5Q9UII4 1024 aaKnown RBP18.77■□□□□ 0.6
SF3A3-203ENST00000461869 SZT2Q5T011 3432 aa18.77■□□□□ 0.6
SF3A3-203ENST00000461869 SMARCA5O60264 1052 aaPredicted RBP18.76■□□□□ 0.59
SF3A3-203ENST00000461869 ARID4AP29374 1257 aaPredicted RBP18.76■□□□□ 0.59
SF3A3-203ENST00000461869 TRIM32Q13049 653 aa18.76■□□□□ 0.59
SF3A3-203ENST00000461869 C7orf61Q8IZ16 206 aa18.76■□□□□ 0.59
SF3A3-203ENST00000461869 SLC17A8Q8NDX2 589 aa18.76■□□□□ 0.59
SF3A3-203ENST00000461869 SH3RF3Q8TEJ3 882 aaPredicted RBP18.76■□□□□ 0.59
SF3A3-203ENST00000461869 LRCH3Q96II8 777 aa18.76■□□□□ 0.59
SF3A3-203ENST00000461869 NOL10Q9BSC4 688 aaKnown RBP18.76■□□□□ 0.59
SF3A3-203ENST00000461869 PI4KBQ9UBF8 816 aa18.76■□□□□ 0.59
SF3A3-203ENST00000461869 GPATCH3Q96I76 525 aa18.75■□□□□ 0.59
SF3A3-203ENST00000461869 NBPF3Q9H094 633 aa18.75■□□□□ 0.59
SF3A3-203ENST00000461869 TMOD4Q9NZQ9 345 aa18.75■□□□□ 0.59
SF3A3-203ENST00000461869 MORF4L1Q9UBU8 362 aa18.75■□□□□ 0.59
SF3A3-203ENST00000461869 LOC285556D6RIA3 1793 aa18.75■□□□□ 0.59
SF3A3-203ENST00000461869 UQCRFS1P1P0C7P4 283 aa18.74■□□□□ 0.59
SF3A3-203ENST00000461869 MCAMP43121 646 aa18.74■□□□□ 0.59
SF3A3-203ENST00000461869 BACE1P56817 501 aa18.74■□□□□ 0.59
SF3A3-203ENST00000461869 IRX3P78415 501 aaPredicted RBP18.74■□□□□ 0.59
SF3A3-203ENST00000461869 MTMR2Q13614 643 aa18.74■□□□□ 0.59
SF3A3-203ENST00000461869 PLEKHM2Q8IWE5 1019 aa18.74■□□□□ 0.59
SF3A3-203ENST00000461869 GDF15Q99988 308 aa18.74■□□□□ 0.59
SF3A3-203ENST00000461869 WDR18Q9BV38 432 aa18.74■□□□□ 0.59
SF3A3-203ENST00000461869 DHX36Q9H2U1 1008 aaKnown RBP18.74■□□□□ 0.59
SF3A3-203ENST00000461869 OSBPL3Q9H4L5 887 aa18.74■□□□□ 0.59
SF3A3-203ENST00000461869 ZMYND8Q9ULU4 1186 aaPredicted RBP18.74■□□□□ 0.59
SF3A3-203ENST00000461869 DOCK3Q8IZD9 2030 aa18.74■□□□□ 0.59
SF3A3-203ENST00000461869 BAG3O95817 575 aa18.73■□□□□ 0.59
SF3A3-203ENST00000461869 MX1P20591 662 aa18.73■□□□□ 0.59
SF3A3-203ENST00000461869 CYP2B6P20813 491 aa18.73■□□□□ 0.59
SF3A3-203ENST00000461869 BMP8BP34820 402 aa18.73■□□□□ 0.59
SF3A3-203ENST00000461869 BMP2KLQ5H9B9 411 aa18.73■□□□□ 0.59
SF3A3-203ENST00000461869 TRIB2Q92519 343 aa18.73■□□□□ 0.59
SF3A3-203ENST00000461869 P2RX7Q99572 595 aaKnown RBP18.73■□□□□ 0.59
SF3A3-203ENST00000461869 C11orf49Q9H6J7 331 aa18.73■□□□□ 0.59
SF3A3-203ENST00000461869 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
SF3A3-203ENST00000461869 AATFQ9NY61 560 aaKnown RBP eCLIP18.73■□□□□ 0.59
SF3A3-203ENST00000461869 ASNSP08243 561 aa18.72■□□□□ 0.59
SF3A3-203ENST00000461869 HOXA7P31268 230 aaPredicted RBP18.72■□□□□ 0.59
SF3A3-203ENST00000461869 MNX1P50219 401 aaPredicted RBP18.72■□□□□ 0.59
SF3A3-203ENST00000461869 NAA16Q6N069 864 aaPredicted RBP18.72■□□□□ 0.59
SF3A3-203ENST00000461869 GPRC5AQ8NFJ5 357 aa18.72■□□□□ 0.59
SF3A3-203ENST00000461869 NUDT12Q9BQG2 462 aa18.72■□□□□ 0.59
SF3A3-203ENST00000461869 GPR108Q9NPR9 543 aa18.72■□□□□ 0.59
SF3A3-203ENST00000461869 OGDHLQ9ULD0 1010 aa18.72■□□□□ 0.59
SF3A3-203ENST00000461869 SALL3Q9BXA9 1300 aa18.72■□□□□ 0.59
SF3A3-203ENST00000461869 C19orf81C9J6K1 198 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 DLL1O00548 723 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 PEX10O60683 326 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 IFIT2P09913 472 aaKnown RBP18.71■□□□□ 0.59
SF3A3-203ENST00000461869 PLCG2P16885 1265 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 SYN1P17600 705 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 JAG1P78504 1218 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 FOXP4Q8IVH2 680 aaPredicted RBP18.71■□□□□ 0.59
SF3A3-203ENST00000461869 MAPKAPK5Q8IW41 473 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 TRIM34Q9BYJ4 488 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 TXNRD2Q9NNW7 524 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 SNRKQ9NRH2 765 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 ATAD5Q96QE3 1844 aa18.71■□□□□ 0.59
SF3A3-203ENST00000461869 RANBP2P49792 3224 aaKnown RBP18.71■□□□□ 0.59
SF3A3-203ENST00000461869 ALPK3Q96L96 1907 aa18.7■□□□□ 0.58
SF3A3-203ENST00000461869 USP17L10C9JJH3 530 aa18.7■□□□□ 0.58
SF3A3-203ENST00000461869 XRCC5P13010 732 aaKnown RBP18.7■□□□□ 0.58
SF3A3-203ENST00000461869 PRKAR2AP13861 404 aaKnown RBP18.7■□□□□ 0.58
SF3A3-203ENST00000461869 PDE1AP54750 535 aa18.7■□□□□ 0.58
SF3A3-203ENST00000461869 HERVK_113P62684 666 aa18.7■□□□□ 0.58
SF3A3-203ENST00000461869 MAP3K21Q5TCX8 1036 aa18.7■□□□□ 0.58
SF3A3-203ENST00000461869 CRACR2BQ8N4Y2 399 aaPredicted RBP18.7■□□□□ 0.58
SF3A3-203ENST00000461869 SOCS4Q8WXH5 440 aa18.7■□□□□ 0.58
SF3A3-203ENST00000461869 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
SF3A3-203ENST00000461869 TTC41PQ6P2S7 1318 aa18.7■□□□□ 0.58
SF3A3-203ENST00000461869 PPP4CP60510 307 aa18.69■□□□□ 0.58
SF3A3-203ENST00000461869 TTC39AQ5SRH9 613 aa18.69■□□□□ 0.58
SF3A3-203ENST00000461869 TTC22Q5TAA0 569 aa18.69■□□□□ 0.58
SF3A3-203ENST00000461869 AACSQ86V21 672 aa18.69■□□□□ 0.58
SF3A3-203ENST00000461869 METTL16Q86W50 562 aaKnown RBP18.69■□□□□ 0.58
SF3A3-203ENST00000461869 CCAR1Q8IX12 1150 aaKnown RBP18.69■□□□□ 0.58
SF3A3-203ENST00000461869 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
SF3A3-203ENST00000461869 RBPJLQ9UBG7 517 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms