RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 PRM3Q9NNZ6 103 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 ZNRF3Q9ULT6 936 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 KIF7Q2M1P5 1343 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 CDHR2Q9BYE9 1310 aa6.67□□□□□ -1.34
BRCA1-206ENST00000461574 IBTKQ9P2D0 1353 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-206ENST00000461574 DDX60Q8IY21 1712 aaKnown RBP6.67□□□□□ -1.34
BRCA1-206ENST00000461574 DLG5Q8TDM6 1919 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 TMEM229AB2RXF0 380 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 H7C1D1 291 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 KHNYNO15037 678 aaKnown RBP6.66□□□□□ -1.34
BRCA1-206ENST00000461574 MYL6BP14649 208 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 HOXA10P31260 410 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-206ENST00000461574 CXCL9Q07325 125 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 PPP1R42Q7Z4L9 355 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 C2orf69Q8N8R5 385 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 ZIC5Q96T25 663 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 PCGF6Q9BYE7 350 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 VPS33BQ9H267 617 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 GDPD2Q9HCC8 539 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 NOP53Q9NZM5 478 aaKnown RBP6.66□□□□□ -1.34
BRCA1-206ENST00000461574 IQSEC3Q9UPP2 1182 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-206ENST00000461574 NUDCQ9Y266 331 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 RRP7AQ9Y3A4 280 aaKnown RBP6.66□□□□□ -1.34
BRCA1-206ENST00000461574 MAP3K15Q6ZN16 1313 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 KDM3BQ7LBC6 1761 aa6.66□□□□□ -1.34
BRCA1-206ENST00000461574 POLR2AP24928 1970 aaKnown RBP6.66□□□□□ -1.34
BRCA1-206ENST00000461574 ERVV-1B6SEH8 477 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 TRPA1O75762 1119 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 NEFMP07197 916 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 ABL2P42684 1182 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 ZNF157P51786 506 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-206ENST00000461574 PCBP4P57723 403 aaKnown RBP6.65□□□□□ -1.34
BRCA1-206ENST00000461574 DCTN1Q14203 1278 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 MAP7D1Q3KQU3 841 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 RGMBQ6NW40 437 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 SLC51AQ86UW1 340 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 TRPM4Q8TD43 1214 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 DCPSQ96C86 337 aaKnown RBP6.65□□□□□ -1.34
BRCA1-206ENST00000461574 PHACTR3Q96KR7 559 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 SAGE1Q9NXZ1 904 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 ATP6V0A2Q9Y487 856 aa6.65□□□□□ -1.34
BRCA1-206ENST00000461574 UBN2Q6ZU65 1347 aa6.65□□□□□ -1.35
BRCA1-206ENST00000461574 CLSPNQ9HAW4 1339 aa6.65□□□□□ -1.35
BRCA1-206ENST00000461574 TAF1P21675 1872 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 A6NJY4 79 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 CDK2AP1O14519 115 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 U2AF1L5P0DN76 240 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-206ENST00000461574 ITGB7P26010 798 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 U2AF1Q01081 240 aaKnown RBP eCLIP6.64□□□□□ -1.35
BRCA1-206ENST00000461574 KIF23Q02241 960 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-206ENST00000461574 MTFR1Q15390 333 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 TAF7Q15545 349 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-206ENST00000461574 SUSD4Q5VX71 490 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 KRT26Q7Z3Y9 468 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 CTU1Q7Z7A3 348 aaKnown RBP6.64□□□□□ -1.35
BRCA1-206ENST00000461574 USP48Q86UV5 1035 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 TRIM11Q96F44 468 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 GBA2Q9HCG7 927 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-206ENST00000461574 AVENQ9NQS1 362 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-206ENST00000461574 CNOT7Q9UIV1 285 aaKnown RBP6.64□□□□□ -1.35
BRCA1-206ENST00000461574 ABCC4O15439 1325 aa6.64□□□□□ -1.35
BRCA1-206ENST00000461574 LRRC37AA6NMS7 1700 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 NTSR2O95665 410 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 FAM157BP0CG42 384 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 HIRAP54198 1017 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-206ENST00000461574 KIAA2012Q0VF49 1180 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 TRIM26Q12899 539 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-206ENST00000461574 DOC2BQ14184 412 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 TBC1D10BQ4KMP7 808 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-206ENST00000461574 PARP10Q53GL7 1025 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 ZNF468Q5VIY5 522 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-206ENST00000461574 TTLL7Q6ZT98 887 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 DDX46Q7L014 1031 aaKnown RBP6.63□□□□□ -1.35
BRCA1-206ENST00000461574 PNISRQ8TF01 805 aaKnown RBP6.63□□□□□ -1.35
BRCA1-206ENST00000461574 GCC1Q96CN9 775 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 UTP14AQ9BVJ6 771 aaKnown RBP6.63□□□□□ -1.35
BRCA1-206ENST00000461574 RNF186Q9NXI6 227 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 ZDHHC3Q9NYG2 299 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 MIS18AQ9NYP9 233 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 PGAP2Q9UHJ9 254 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 HDAC9Q9UKV0 1011 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 PRR12Q9ULL5 1215 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 PCDHGA11Q9Y5H2 935 aa6.63□□□□□ -1.35
BRCA1-206ENST00000461574 SHTN1A0MZ66 631 aa6.62□□□□□ -1.35
BRCA1-206ENST00000461574 FAM155AB1AL88 458 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-206ENST00000461574 ADM5C9JUS6 153 aa6.62□□□□□ -1.35
BRCA1-206ENST00000461574 PIK3CDO00329 1044 aa6.62□□□□□ -1.35
BRCA1-206ENST00000461574 HTATSF1O43719 755 aaKnown RBP6.62□□□□□ -1.35
BRCA1-206ENST00000461574 BBOX1O75936 387 aa6.62□□□□□ -1.35
BRCA1-206ENST00000461574 SEMA3FQ13275 785 aa6.62□□□□□ -1.35
BRCA1-206ENST00000461574 DLK2Q6UY11 383 aa6.62□□□□□ -1.35
BRCA1-206ENST00000461574 SP8Q8IXZ3 490 aa6.62□□□□□ -1.35
BRCA1-206ENST00000461574 PLVAPQ9BX97 442 aa6.62□□□□□ -1.35
BRCA1-206ENST00000461574 RTFDC1Q9BY42 306 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-206ENST00000461574 DUOX1Q9NRD9 1551 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 CENPFP49454 3210 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 EFSO43281 561 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 TXLNAP40222 546 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 PKN2Q16513 984 aaKnown RBP6.61□□□□□ -1.35
BRCA1-206ENST00000461574 WASHC4Q2M389 1173 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms