RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 USP5P45974 858 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 JAG1P78504 1218 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 PKN2Q16513 984 aaKnown RBP12.17□□□□□ -0.46
SYN3-206ENST00000461446 SHROOM1Q2M3G4 852 aaPredicted RBP12.17□□□□□ -0.46
SYN3-206ENST00000461446 MCMDC2Q4G0Z9 681 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 GPAT2Q6NUI2 795 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 ANKRD23Q86SG2 305 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 ERO1AQ96HE7 468 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 DHX36Q9H2U1 1008 aaKnown RBP12.17□□□□□ -0.46
SYN3-206ENST00000461446 DIAPH3Q9NSV4 1193 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 A0A0G2JLL6 359 aaPredicted RBP12.16□□□□□ -0.46
SYN3-206ENST00000461446 PRKAB2O43741 272 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 GNAT2P19087 354 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 CHMLP26374 656 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 FBXO46Q6PJ61 603 aaPredicted RBP12.16□□□□□ -0.46
SYN3-206ENST00000461446 CWC27Q6UX04 472 aaKnown RBP12.16□□□□□ -0.46
SYN3-206ENST00000461446 GADL1Q6ZQY3 521 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 PRRT2Q7Z6L0 340 aaPredicted RBP12.16□□□□□ -0.46
SYN3-206ENST00000461446 FOXP4Q8IVH2 680 aaPredicted RBP12.16□□□□□ -0.46
SYN3-206ENST00000461446 CRACR2BQ8N4Y2 399 aaPredicted RBP12.16□□□□□ -0.46
SYN3-206ENST00000461446 SDR42E1Q8WUS8 393 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 ARHGAP39Q9C0H5 1083 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 ZCCHC17Q9NP64 241 aaKnown RBP12.16□□□□□ -0.46
SYN3-206ENST00000461446 DCP1AQ9NPI6 582 aaPredicted RBP12.16□□□□□ -0.46
SYN3-206ENST00000461446 ATP8A2Q9NTI2 1148 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 CPA4Q9UI42 421 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 HERC5Q9UII4 1024 aaKnown RBP12.16□□□□□ -0.46
SYN3-206ENST00000461446 SLC4A4Q9Y6R1 1079 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 FOCADQ5VW36 1801 aa12.16□□□□□ -0.46
SYN3-206ENST00000461446 GSG1L2A8MUP6 293 aa12.15□□□□□ -0.46
SYN3-206ENST00000461446 CYP2C8P10632 490 aa12.15□□□□□ -0.46
SYN3-206ENST00000461446 SOX10P56693 466 aa12.15□□□□□ -0.46
SYN3-206ENST00000461446 EVX2Q03828 476 aa12.15□□□□□ -0.46
SYN3-206ENST00000461446 SPP2Q13103 211 aa12.15□□□□□ -0.46
SYN3-206ENST00000461446 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
SYN3-206ENST00000461446 METTL16Q86W50 562 aaKnown RBP12.15□□□□□ -0.46
SYN3-206ENST00000461446 TRIM34Q9BYJ4 488 aa12.15□□□□□ -0.46
SYN3-206ENST00000461446 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
SYN3-206ENST00000461446 PHIPQ8WWQ0 1821 aa12.15□□□□□ -0.46
SYN3-206ENST00000461446 PATL2C9JE40 543 aaKnown RBP12.14□□□□□ -0.47
SYN3-206ENST00000461446 GDF11O95390 407 aa12.14□□□□□ -0.47
SYN3-206ENST00000461446 HLA-DOAP06340 250 aa12.14□□□□□ -0.47
SYN3-206ENST00000461446 PLCD1P51178 756 aa12.14□□□□□ -0.47
SYN3-206ENST00000461446 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
SYN3-206ENST00000461446 C17orf99Q6UX52 265 aa12.14□□□□□ -0.47
SYN3-206ENST00000461446 FASTKD5Q7L8L6 764 aaKnown RBP12.14□□□□□ -0.47
SYN3-206ENST00000461446 ZNF589Q86UQ0 364 aaPredicted RBP12.14□□□□□ -0.47
SYN3-206ENST00000461446 ZNF280CQ8ND82 737 aa12.14□□□□□ -0.47
SYN3-206ENST00000461446 MCM9Q9NXL9 1143 aa12.14□□□□□ -0.47
SYN3-206ENST00000461446 ADGRA2Q96PE1 1338 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 MYH1P12882 1939 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 APPP05067 770 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 CTGFP29279 349 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 HMGCS2P54868 508 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 MFAP1P55081 439 aaKnown RBP12.13□□□□□ -0.47
SYN3-206ENST00000461446 LACTBP83111 547 aaPredicted RBP12.13□□□□□ -0.47
SYN3-206ENST00000461446 TREML2Q5T2D2 321 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 IFNL3Q8IZI9 196 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 RUFY2Q8WXA3 655 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 DDRGK1Q96HY6 314 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 PARK7Q99497 189 aaKnown RBP12.13□□□□□ -0.47
SYN3-206ENST00000461446 PTPN22Q9Y2R2 807 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 ZSWIM8A7E2V4 1837 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 ATAD5Q96QE3 1844 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 PTPRFP10586 1907 aa12.13□□□□□ -0.47
SYN3-206ENST00000461446 CCDC171Q6TFL3 1326 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 RAD50Q92878 1312 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 USP17L21D6R901 530 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 FOXP2O15409 715 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
SYN3-206ENST00000461446 CYP2D6P10635 497 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 HSPD1P10809 573 aaKnown RBP12.12□□□□□ -0.47
SYN3-206ENST00000461446 VPS53Q5VIR6 699 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 IL25Q9H293 177 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 EPB41L4AQ9HCS5 686 aaPredicted RBP12.12□□□□□ -0.47
SYN3-206ENST00000461446 SERPINB13Q9UIV8 391 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 ZBTB21Q9ULJ3 1066 aa12.12□□□□□ -0.47
SYN3-206ENST00000461446 SMIM22K7EJ46 135 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 SGSM2O43147 1006 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 CDC45O75419 566 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 GH2P01242 217 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 ASNSP08243 561 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 RGS19P49795 217 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 MTMR2Q13614 643 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 ALX1Q15699 326 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 SBK1Q52WX2 424 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 C12orf60Q5U649 245 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 AGTPBP1Q9UPW5 1226 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 PTCH2Q9Y6C5 1203 aa12.11□□□□□ -0.47
SYN3-206ENST00000461446 FGAP02671 866 aa12.1□□□□□ -0.47
SYN3-206ENST00000461446 BCRP11274 1271 aa12.1□□□□□ -0.47
SYN3-206ENST00000461446 SHMT1P34896 483 aa12.1□□□□□ -0.47
SYN3-206ENST00000461446 PSMC4P43686 418 aa12.1□□□□□ -0.47
SYN3-206ENST00000461446 TDO2P48775 406 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms