RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 SYNE3Q6ZMZ3 975 aa19.65■□□□□ 0.74
YIPF3-205ENST00000460547 RBM43Q6ZSC3 357 aaKnown RBP19.65■□□□□ 0.74
YIPF3-205ENST00000460547 ZNF804AQ7Z570 1209 aa19.65■□□□□ 0.74
YIPF3-205ENST00000460547 RTEL1Q9NZ71 1219 aa19.65■□□□□ 0.74
YIPF3-205ENST00000460547 IFNAR1P17181 557 aa19.64■□□□□ 0.73
YIPF3-205ENST00000460547 CHAF1AQ13111 956 aaPredicted RBP19.64■□□□□ 0.73
YIPF3-205ENST00000460547 ECM29Q5VYK3 1845 aa19.63■□□□□ 0.73
YIPF3-205ENST00000460547 PPFIA3O75145 1194 aa19.63■□□□□ 0.73
YIPF3-205ENST00000460547 NT5C2P49902 561 aa19.63■□□□□ 0.73
YIPF3-205ENST00000460547 SCNN1DP51172 638 aa19.63■□□□□ 0.73
YIPF3-205ENST00000460547 KIF23Q02241 960 aaPredicted RBP19.63■□□□□ 0.73
YIPF3-205ENST00000460547 SEC23AQ15436 765 aa19.63■□□□□ 0.73
YIPF3-205ENST00000460547 RRP12Q5JTH9 1297 aaKnown RBP19.63■□□□□ 0.73
YIPF3-205ENST00000460547 CHADLQ6NUI6 762 aa19.63■□□□□ 0.73
YIPF3-205ENST00000460547 ALG1Q9BT22 464 aa19.63■□□□□ 0.73
YIPF3-205ENST00000460547 CLSTN2Q9H4D0 955 aa19.63■□□□□ 0.73
YIPF3-205ENST00000460547 DACT1Q9NYF0 836 aa19.63■□□□□ 0.73
YIPF3-205ENST00000460547 MINDY4BA8MYZ0 360 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 RANBP6O60518 1105 aaKnown RBP19.62■□□□□ 0.73
YIPF3-205ENST00000460547 YEATS4O95619 227 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 POTEIP0CG38 1075 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 POTEJP0CG39 1038 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 EPS15P42566 896 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 PPP2R5BQ15173 497 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 MAP3K11Q16584 847 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 SBK1Q52WX2 424 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 CTR9Q6PD62 1173 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 LDHDQ86WU2 507 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 DZIP1Q86YF9 867 aaKnown RBP19.62■□□□□ 0.73
YIPF3-205ENST00000460547 BICD2Q8TD16 824 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 TRIM44Q96DX7 344 aaPredicted RBP19.62■□□□□ 0.73
YIPF3-205ENST00000460547 UBAC1Q9BSL1 405 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 TOMM22Q9NS69 142 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 POLR3EQ9NVU0 708 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.62■□□□□ 0.73
YIPF3-205ENST00000460547 LTBP1Q14766 1721 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 CCDC196A0A1B0GTZ2 297 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 PSMD14O00487 310 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 ORC4O43929 436 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 FMNL1O95466 1100 aaPredicted RBP19.62■□□□□ 0.73
YIPF3-205ENST00000460547 GMPSP49915 693 aaPredicted RBP19.62■□□□□ 0.73
YIPF3-205ENST00000460547 PODNQ7Z5L7 613 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 RNF214Q8ND24 703 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 WASF1Q92558 559 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 DCP1AQ9NPI6 582 aaPredicted RBP19.62■□□□□ 0.73
YIPF3-205ENST00000460547 GPRC5DQ9NZD1 345 aa19.62■□□□□ 0.73
YIPF3-205ENST00000460547 ARPP21Q9UBL0 812 aaPredicted RBP19.62■□□□□ 0.73
YIPF3-205ENST00000460547 CCDC192P0DO97 292 aa19.61■□□□□ 0.73
YIPF3-205ENST00000460547 RXRAP19793 462 aa19.61■□□□□ 0.73
YIPF3-205ENST00000460547 GSTO1P78417 241 aa19.61■□□□□ 0.73
YIPF3-205ENST00000460547 RTN1Q16799 776 aa19.61■□□□□ 0.73
YIPF3-205ENST00000460547 HS1BP3Q53T59 392 aa19.61■□□□□ 0.73
YIPF3-205ENST00000460547 MYSM1Q5VVJ2 828 aa19.61■□□□□ 0.73
YIPF3-205ENST00000460547 KCNQ5Q9NR82 932 aa19.61■□□□□ 0.73
YIPF3-205ENST00000460547 TNKSO95271 1327 aa19.6■□□□□ 0.73
YIPF3-205ENST00000460547 LDHBP07195 334 aaKnown RBP19.6■□□□□ 0.73
YIPF3-205ENST00000460547 APLP1P51693 650 aa19.6■□□□□ 0.73
YIPF3-205ENST00000460547 TPRNQ4KMQ1 711 aa19.6■□□□□ 0.73
YIPF3-205ENST00000460547 OTUD7BQ6GQQ9 843 aa19.6■□□□□ 0.73
YIPF3-205ENST00000460547 CERS3Q8IU89 383 aa19.6■□□□□ 0.73
YIPF3-205ENST00000460547 ZNF654Q8IZM8 581 aa19.6■□□□□ 0.73
YIPF3-205ENST00000460547 MYL10Q9BUA6 226 aa19.6■□□□□ 0.73
YIPF3-205ENST00000460547 FTOQ9C0B1 505 aaKnown RBP eCLIP19.6■□□□□ 0.73
YIPF3-205ENST00000460547 AATFQ9NY61 560 aaKnown RBP eCLIP19.6■□□□□ 0.73
YIPF3-205ENST00000460547 ZBTB12Q9Y330 459 aaPredicted RBP19.6■□□□□ 0.73
YIPF3-205ENST00000460547 SCN4AP35499 1836 aa19.6■□□□□ 0.73
YIPF3-205ENST00000460547 H7C1D1 291 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 IL1R1P14778 569 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 SSRP1Q08945 709 aaKnown RBP19.59■□□□□ 0.73
YIPF3-205ENST00000460547 USP50Q70EL3 339 aaPredicted RBP19.59■□□□□ 0.73
YIPF3-205ENST00000460547 KCNG4Q8TDN1 519 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 PHKBQ93100 1093 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 TNMDQ9H2S6 317 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 ADARB2Q9NS39 739 aaKnown RBP19.59■□□□□ 0.73
YIPF3-205ENST00000460547 CNOT7Q9UIV1 285 aaKnown RBP19.59■□□□□ 0.73
YIPF3-205ENST00000460547 BAZ2AQ9UIF9 1905 aaKnown RBP19.59■□□□□ 0.73
YIPF3-205ENST00000460547 A0A1W2PQ27 194 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 A0A1W2PQ64 194 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 A0A1W2PQD8 194 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 USP17L12C9JPN9 530 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 USP17L21D6R901 530 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 NR1I2O75469 434 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 KRT40Q6A162 431 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 LINC00301Q8NCQ3 95 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 DPF2Q92785 391 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 ZSCAN10Q96SZ4 725 aaPredicted RBP19.59■□□□□ 0.73
YIPF3-205ENST00000460547 ZKSCAN3Q9BRR0 538 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 COA1Q9GZY4 146 aa19.59■□□□□ 0.73
YIPF3-205ENST00000460547 KIF28PB7ZC32 967 aa19.58■□□□□ 0.72
YIPF3-205ENST00000460547 SLC3A2P08195 630 aaKnown RBP19.58■□□□□ 0.72
YIPF3-205ENST00000460547 RPS12P25398 132 aaKnown RBP19.58■□□□□ 0.72
YIPF3-205ENST00000460547 PPP4CP60510 307 aa19.58■□□□□ 0.72
YIPF3-205ENST00000460547 CEBPZQ03701 1054 aaKnown RBP19.58■□□□□ 0.72
YIPF3-205ENST00000460547 IQCA1Q86XH1 822 aa19.58■□□□□ 0.72
YIPF3-205ENST00000460547 CCDC144CPQ8IYA2 1237 aa19.58■□□□□ 0.72
YIPF3-205ENST00000460547 TRIM22Q8IYM9 498 aa19.58■□□□□ 0.72
YIPF3-205ENST00000460547 ENAHQ8N8S7 591 aaPredicted RBP19.58■□□□□ 0.72
YIPF3-205ENST00000460547 ROBO3Q96MS0 1386 aa19.57■□□□□ 0.72
YIPF3-205ENST00000460547 CYP2D7A0A087X1C5 515 aa19.57■□□□□ 0.72
YIPF3-205ENST00000460547 CTAGE5O15320 804 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms