RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 KCND1Q9NSA2 647 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 ITGB1BP2Q9UKP3 347 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 SYNPO2Q9UMS6 1093 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 GOLGA6L9A6NEM1 432 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 GOLGA6L19H0YKK7 550 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 EPB41L2O43491 1005 aaKnown RBP6.46□□□□□ -1.38
HMGB4-202ENST00000458277 NBPF7P0C2Y1 421 aaPredicted RBP6.46□□□□□ -1.38
HMGB4-202ENST00000458277 PNMA6AP0CW24 399 aaPredicted RBP6.46□□□□□ -1.38
HMGB4-202ENST00000458277 GLB1P16278 677 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 PTPRGP23470 1445 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 MCM2P49736 904 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 RPS6KA3P51812 740 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 GYS2P54840 703 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 PTPN14Q15678 1187 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 FHOD3Q2V2M9 1422 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 C20orf194Q5TEA3 1177 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 BRAPQ7Z569 592 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 DTX1Q86Y01 620 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 AGGF1Q8N302 714 aaeCLIP6.46□□□□□ -1.38
HMGB4-202ENST00000458277 CTCFLQ8NI51 663 aaPredicted RBP6.46□□□□□ -1.38
HMGB4-202ENST00000458277 PRG4Q92954 1404 aaPredicted RBP6.46□□□□□ -1.38
HMGB4-202ENST00000458277 CCDC34Q96HJ3 373 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 SUSD3Q96L08 255 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 LPIN3Q9BQK8 851 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 MRPL18Q9H0U6 180 aaKnown RBP6.46□□□□□ -1.38
HMGB4-202ENST00000458277 ZNF358Q9NW07 568 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 HCN4Q9Y3Q4 1203 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 PCDHGA11Q9Y5H2 935 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 FYCO1Q9BQS8 1478 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 SPAG9O60271 1321 aaKnown RBP6.46□□□□□ -1.38
HMGB4-202ENST00000458277 ATXN2Q99700 1313 aaKnown RBP6.46□□□□□ -1.38
HMGB4-202ENST00000458277 SYNRGQ9UMZ2 1314 aa6.46□□□□□ -1.38
HMGB4-202ENST00000458277 REREQ9P2R6 1566 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 CARMIL2Q6F5E8 1435 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 SYCE3A1L190 88 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 PLIN1O60240 522 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 CYP2E1P05181 493 aaPredicted RBP6.45□□□□□ -1.38
HMGB4-202ENST00000458277 NFKB1P19838 968 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 SCP2P22307 547 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 YY1P25490 414 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 CDR1P51861 262 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 NAP1L1P55209 391 aaKnown RBP6.45□□□□□ -1.38
HMGB4-202ENST00000458277 PSMC1P62191 440 aaKnown RBP6.45□□□□□ -1.38
HMGB4-202ENST00000458277 SF3A1Q15459 793 aaKnown RBP6.45□□□□□ -1.38
HMGB4-202ENST00000458277 TPD52L1Q16890 204 aaPredicted RBP6.45□□□□□ -1.38
HMGB4-202ENST00000458277 RGL3Q3MIN7 710 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 PERM1Q5SV97 790 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 GJC2Q5T442 439 aaPredicted RBP6.45□□□□□ -1.38
HMGB4-202ENST00000458277 CCDC183Q5T5S1 534 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 RCSD1Q6JBY9 416 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 ELMSAN1Q6PJG2 1045 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 TRIM74Q86UV6 250 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 TRIM73Q86UV7 250 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 MORC1Q86VD1 984 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 TNS4Q8IZW8 715 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 TMEM130Q8N3G9 435 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 CXorf38Q8TB03 319 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 FAM200AQ8TCP9 573 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 GPT2Q8TD30 523 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 C17orf50Q8WW18 174 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 ZNF428Q96B54 188 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 FAXDC2Q96IV6 333 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 CABS1Q96KC9 395 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 CFAP53Q96M91 514 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 UBXN6Q9BZV1 441 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 GOPCQ9HD26 462 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 CWC25Q9NXE8 425 aaPredicted RBP6.45□□□□□ -1.38
HMGB4-202ENST00000458277 UTP6Q9NYH9 597 aaKnown RBP6.45□□□□□ -1.38
HMGB4-202ENST00000458277 FRMD4BQ9Y2L6 1034 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 FHOD1Q9Y613 1164 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 KIAA0556O60303 1618 aa6.45□□□□□ -1.38
HMGB4-202ENST00000458277 TIAM1Q13009 1591 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 GOLGA6CA6NDK9 693 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 GOLGA6BA6NDN3 693 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 U2SURPO15042 1029 aaKnown RBP6.44□□□□□ -1.38
HMGB4-202ENST00000458277 CAND2O75155 1236 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 PPFIA4O75335 1185 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 PRPF40AO75400 957 aaKnown RBP6.44□□□□□ -1.38
HMGB4-202ENST00000458277 GOLGA6DP0CG33 693 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 MYBL2P10244 700 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 EZRP15311 586 aaKnown RBP6.44□□□□□ -1.38
HMGB4-202ENST00000458277 PSME1Q06323 249 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 NFIAQ12857 509 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 CCDC158Q5M9N0 1113 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 WDR78Q5VTH9 848 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 FBXO38Q6PIJ6 1188 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 MICALCLQ6ZW33 695 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 CCDC170Q8IYT3 715 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 NEK11Q8NG66 645 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 ZCRB1Q8TBF4 217 aaKnown RBP6.44□□□□□ -1.38
HMGB4-202ENST00000458277 MAGEC3Q8TD91 643 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 ZNF483Q8TF39 744 aaPredicted RBP6.44□□□□□ -1.38
HMGB4-202ENST00000458277 UBXN4Q92575 508 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 SAAL1Q96ER3 474 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 AGAP3Q96P47 875 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 BAG1Q99933 345 aaPredicted RBP6.44□□□□□ -1.38
HMGB4-202ENST00000458277 LZTS2Q9BRK4 669 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 GSX2Q9BZM3 304 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 PHACTR1Q9C0D0 580 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 TTC12Q9H892 705 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms