RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 FAM105AQ9NUU6 356 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 PRKAB1Q9Y478 270 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 CFAP69A5D8W1 941 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 FAM170BA6NMN3 283 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 EIF1AYO14602 144 aaKnown RBP5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 CYP26A1O43174 497 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 ZNF500O60304 480 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 ECEL1O95672 775 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 RAB6AP20340 208 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 PLEKHG4Q58EX7 1191 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 AKAP4Q5JQC9 854 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 SEZ6L2Q6UXD5 910 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 CBLL1Q75N03 491 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 PCGF5Q86SE9 256 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 SLC39A13Q96H72 371 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 WDR18Q9BV38 432 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 NRBP1Q9UHY1 535 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 AP4E1Q9UPM8 1137 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 TRAK1Q9UPV9 953 aa5.08□□□□□ -1.6
HMGB3P30-201ENST00000457863 AOC2O75106 756 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 STK10O94804 968 aaKnown RBP5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 P4HBP07237 508 aaKnown RBP5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 ZNF76P36508 570 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 CCSAPQ6IQ19 270 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 ZNF280DQ6N043 979 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 DYMQ7RTS9 669 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 GLIS3Q8NEA6 775 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 RELTQ969Z4 430 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 CCDC74AQ96AQ1 378 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 DMRTB1Q96MA1 342 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 PCGF6Q9BYE7 350 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 RBCK1Q9BYM8 510 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 KCNG1Q9UIX4 513 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 RNF114Q9Y508 228 aa5.07□□□□□ -1.6
HMGB3P30-201ENST00000457863 CLSPNQ9HAW4 1339 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 TMEM238LA0A1B0GVL6 79 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 BTBD11A6QL63 1104 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 FGAP02671 866 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 HSP90AA1P07900 732 aaKnown RBP5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 NFICP08651 508 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 CALRP27797 417 aaKnown RBP5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 COPB2P35606 906 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 HNRNPUQ00839 825 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 PDE3AQ14432 1141 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 DHX8Q14562 1220 aaKnown RBP5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 ZNF765Q7L2R6 523 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 MCF2L2Q86YR7 1114 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 RNPC3Q96LT9 517 aaKnown RBP5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 APBA2Q99767 749 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 IER2Q9BTL4 223 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 C1GALT1Q9NS00 363 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 RAD18Q9NS91 495 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 KRT82Q9NSB4 513 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 MAP3K20Q9NYL2 800 aaKnown RBP5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 SFMBT1Q9UHJ3 866 aa5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 TTF2Q9UNY4 1162 aaKnown RBP5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 ARID1BQ8NFD5 2236 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P30-201ENST00000457863 KIF3BO15066 747 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 TMPRSS2O15393 492 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 EPB41L2O43491 1005 aaKnown RBP5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 ITGAEP38570 1179 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 ASPAP45381 313 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 FAAP100Q0VG06 881 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 GRM2Q14416 872 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 ODR4Q5SWX8 454 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 DUSP27Q5VZP5 1158 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 TMC4Q7Z404 712 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 VPS37DQ86XT2 251 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 AGBL5Q8NDL9 886 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 SECISBP2LQ93073 1101 aaKnown RBP5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 MKL1Q969V6 931 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 ZNF512BQ96KM6 892 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 FAM161BQ96MY7 647 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 CSRNP1Q96S65 589 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 NAP1L4Q99733 375 aaKnown RBP5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 CRIM1Q9NZV1 1036 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 PARP2Q9UGN5 583 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 INPP5FQ9Y2H2 1132 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 PCDHGC5Q9Y5F6 944 aa5.05□□□□□ -1.6
HMGB3P30-201ENST00000457863 DYNC1LI2O43237 492 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 SORBS3O60504 671 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 GADD45BO75293 160 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 LDHAP00338 332 aaKnown RBP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 YBX3P16989 372 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 ITGB5P18084 799 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 CD53P19397 219 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 MAN1A1P33908 653 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 SAFB2Q14151 953 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 VPS72Q15906 364 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 KIF4BQ2VIQ3 1234 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 PRPF38AQ8NAV1 312 aaKnown RBP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 CXorf38Q8TB03 319 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 NIF3L1Q9GZT8 377 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 TMX4Q9H1E5 349 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 ATXN3LQ9H3M9 355 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 CCDC86Q9H6F5 360 aaKnown RBP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 PAK6Q9NQU5 681 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 ZC3H7BQ9UGR2 993 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms