RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CCDC186Q7Z3E2 898 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 DRC7Q8IY82 874 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 ARPP21Q9UBL0 812 aaPredicted RBP19.23■□□□□ 0.67
CCDC43-202ENST00000457422 CLIP2Q9UDT6 1046 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
CCDC43-202ENST00000457422 TOB1P50616 345 aaPredicted RBP19.23■□□□□ 0.67
CCDC43-202ENST00000457422 NLRP12P59046 1061 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 FUT2Q10981 343 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 GRAPQ13588 217 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
CCDC43-202ENST00000457422 SPTY2D1Q68D10 685 aaPredicted RBP19.23■□□□□ 0.67
CCDC43-202ENST00000457422 CATIPQ7Z7H3 387 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 GRAPLQ8TC17 118 aaPredicted RBP19.23■□□□□ 0.67
CCDC43-202ENST00000457422 TUBE1Q9UJT0 475 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 LEMD3Q9Y2U8 911 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 UBR3Q6ZT12 1888 aa19.22■□□□□ 0.67
CCDC43-202ENST00000457422 DDAH1O94760 285 aa19.22■□□□□ 0.67
CCDC43-202ENST00000457422 ADRA2BP18089 450 aa19.22■□□□□ 0.67
CCDC43-202ENST00000457422 TROAPQ12815 778 aa19.22■□□□□ 0.67
CCDC43-202ENST00000457422 DPCR1Q3MIW9 517 aa19.22■□□□□ 0.67
CCDC43-202ENST00000457422 AOPEPQ8N6M6 819 aa19.22■□□□□ 0.67
CCDC43-202ENST00000457422 CLIC6Q96NY7 704 aa19.22■□□□□ 0.67
CCDC43-202ENST00000457422 NT5C2P49902 561 aa19.21■□□□□ 0.67
CCDC43-202ENST00000457422 ELOA2Q8IYF1 753 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-202ENST00000457422 KRI1Q8N9T8 703 aaKnown RBP19.21■□□□□ 0.67
CCDC43-202ENST00000457422 CNBD1Q8NA66 436 aa19.21■□□□□ 0.67
CCDC43-202ENST00000457422 MORC2Q9Y6X9 1032 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-202ENST00000457422 PRPF3O43395 683 aaKnown RBP19.21■□□□□ 0.67
CCDC43-202ENST00000457422 LRRC4BQ9NT99 713 aa19.21■□□□□ 0.67
CCDC43-202ENST00000457422 ANKIB1Q9P2G1 1089 aa19.21■□□□□ 0.67
CCDC43-202ENST00000457422 NRBP1Q9UHY1 535 aa19.21■□□□□ 0.67
CCDC43-202ENST00000457422 AFF2P51816 1311 aa19.2■□□□□ 0.66
CCDC43-202ENST00000457422 CYP2D6P10635 497 aa19.2■□□□□ 0.66
CCDC43-202ENST00000457422 XBP1P17861 261 aa19.2■□□□□ 0.66
CCDC43-202ENST00000457422 AKAP17AQ02040 695 aaKnown RBP19.2■□□□□ 0.66
CCDC43-202ENST00000457422 PKN1Q16512 942 aa19.2■□□□□ 0.66
CCDC43-202ENST00000457422 C15orf52Q6ZUT6 534 aaKnown RBP19.2■□□□□ 0.66
CCDC43-202ENST00000457422 DZIP1Q86YF9 867 aaKnown RBP19.2■□□□□ 0.66
CCDC43-202ENST00000457422 PTPREP23469 700 aa19.2■□□□□ 0.66
CCDC43-202ENST00000457422 NR5A1Q13285 461 aa19.2■□□□□ 0.66
CCDC43-202ENST00000457422 WDR66Q8TBY9 1149 aa19.2■□□□□ 0.66
CCDC43-202ENST00000457422 XDHP47989 1333 aa19.19■□□□□ 0.66
CCDC43-202ENST00000457422 BIN1O00499 593 aa19.19■□□□□ 0.66
CCDC43-202ENST00000457422 PLEKHA8P1O95397 391 aa19.19■□□□□ 0.66
CCDC43-202ENST00000457422 OXER1Q8TDS5 423 aa19.19■□□□□ 0.66
CCDC43-202ENST00000457422 SHISA4Q96DD7 197 aa19.19■□□□□ 0.66
CCDC43-202ENST00000457422 SEPT12Q8IYM1 358 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 ZNF579Q8NAF0 562 aaKnown RBP19.18■□□□□ 0.66
CCDC43-202ENST00000457422 PHF20Q9BVI0 1012 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 BCL11BQ9C0K0 894 aaPredicted RBP19.18■□□□□ 0.66
CCDC43-202ENST00000457422 FBXO2Q9UK22 296 aaPredicted RBP19.18■□□□□ 0.66
CCDC43-202ENST00000457422 KCNH3Q9ULD8 1083 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 CEP131Q9UPN4 1083 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.18■□□□□ 0.66
CCDC43-202ENST00000457422 PDE4BQ07343 736 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 CCDC144BQ3MJ40 725 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 DNTTIP2Q5QJE6 756 aaKnown RBP19.18■□□□□ 0.66
CCDC43-202ENST00000457422 PRR5LQ6MZQ0 368 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 KRBA2Q6ZNG9 492 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 TMTC3Q6ZXV5 915 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 CERKQ8TCT0 537 aa19.18■□□□□ 0.66
CCDC43-202ENST00000457422 MKRN1Q9UHC7 482 aaKnown RBP19.18■□□□□ 0.66
CCDC43-202ENST00000457422 IKBKBO14920 756 aa19.17■□□□□ 0.66
CCDC43-202ENST00000457422 NEMFO60524 1076 aa19.17■□□□□ 0.66
CCDC43-202ENST00000457422 NMT2O60551 498 aa19.17■□□□□ 0.66
CCDC43-202ENST00000457422 FAM47AQ5JRC9 791 aa19.17■□□□□ 0.66
CCDC43-202ENST00000457422 PRIMPOLQ96LW4 560 aa19.17■□□□□ 0.66
CCDC43-202ENST00000457422 hCG_1642624A0A1W2PR95 340 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 SMTNL1A8MU46 457 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 LRMPQ12912 555 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 GPR101Q96P66 508 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-202ENST00000457422 VPS54Q9P1Q0 977 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 PCDHB6Q9Y5E3 794 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 SRPRBQ9Y5M8 271 aaKnown RBP19.16■□□□□ 0.66
CCDC43-202ENST00000457422 CNTNAP5Q8WYK1 1306 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 ROBO3Q96MS0 1386 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 UQCRHLA0A096LP55 91 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 LDHBP07195 334 aaKnown RBP19.16■□□□□ 0.66
CCDC43-202ENST00000457422 UQCRHP07919 91 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 KRT2P35908 639 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 NCAPHQ15003 741 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 CRY2Q49AN0 593 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 METTL16Q86W50 562 aaKnown RBP19.16■□□□□ 0.66
CCDC43-202ENST00000457422 CACTINQ8WUQ7 758 aaKnown RBP19.16■□□□□ 0.66
CCDC43-202ENST00000457422 NOL10Q9BSC4 688 aaKnown RBP19.16■□□□□ 0.66
CCDC43-202ENST00000457422 NAV1Q8NEY1 1877 aa19.16■□□□□ 0.66
CCDC43-202ENST00000457422 TPM4P67936 248 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 LONRF3Q496Y0 759 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 ZNF804AQ7Z570 1209 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 CNNM3Q8NE01 707 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 RPGRQ92834 1020 aaKnown RBP19.15■□□□□ 0.66
CCDC43-202ENST00000457422 MCM9Q9NXL9 1143 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 FAM13BQ9NYF5 915 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 USP17L8P0C7I0 530 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 GSTO1P78417 241 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 GRIN1Q05586 938 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 SLC4A8Q2Y0W8 1093 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 SPECC1Q5M775 1068 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 LRRC8AQ8IWT6 810 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 CTCFLQ8NI51 663 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms