RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 BTBD19C9JJ37 291 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 TBC1D12O60347 775 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 CTNND1O60716 968 aaKnown RBP11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 IGSF3O75054 1194 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 PTPRAP18433 802 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 ATP5JP18859 108 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 USP5P45974 858 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 SLC9C2Q5TAH2 1124 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 CCDC84Q86UT8 332 aaPredicted RBP11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 FBXO22Q8NEZ5 403 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 PALD1Q9ULE6 856 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 ZHX2Q9Y6X8 837 aa11.48□□□□□ -0.57
CDC42EP3-203ENST00000453555 MYH8P13535 1937 aa11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 BAZ2AQ9UIF9 1905 aaKnown RBP11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 ZNF532Q9HCE3 1301 aa11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 PDE6AP16499 860 aa11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 RRP1BQ14684 758 aaKnown RBP11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 SLFNL1Q499Z3 407 aa11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 NOM1Q5C9Z4 860 aaKnown RBP11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 HAUS7Q99871 368 aa11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 DHX36Q9H2U1 1008 aaKnown RBP11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 PI4KBQ9UBF8 816 aa11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 KCNH4Q9UQ05 1017 aa11.47□□□□□ -0.57
CDC42EP3-203ENST00000453555 MAGEB6P1A0A0J9YX57 407 aa11.46□□□□□ -0.57
CDC42EP3-203ENST00000453555 TSHZ3Q63HK5 1081 aa11.46□□□□□ -0.57
CDC42EP3-203ENST00000453555 TMEM92Q6UXU6 159 aa11.46□□□□□ -0.57
CDC42EP3-203ENST00000453555 CRACR2BQ8N4Y2 399 aaPredicted RBP11.46□□□□□ -0.57
CDC42EP3-203ENST00000453555 CD99L2Q8TCZ2 262 aa11.46□□□□□ -0.57
CDC42EP3-203ENST00000453555 RIOK1Q9BRS2 568 aaKnown RBP11.46□□□□□ -0.57
CDC42EP3-203ENST00000453555 TRIM34Q9BYJ4 488 aa11.46□□□□□ -0.57
CDC42EP3-203ENST00000453555 AFG3L2Q9Y4W6 797 aa11.46□□□□□ -0.57
CDC42EP3-203ENST00000453555 DDX60LQ5H9U9 1706 aaKnown RBP11.46□□□□□ -0.58
CDC42EP3-203ENST00000453555 MGAMO43451 1857 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 TCRBV5S4A2TA0A5A2 114 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 TRIM75PA6NK02 468 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 PDHXO00330 501 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 CXCL11O14625 94 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 CHGBP05060 677 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 HLA-DOAP06340 250 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 HOXB3P14651 431 aaPredicted RBP11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 CAP2P40123 477 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 SP3Q02447 781 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 MOGSQ13724 837 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 GADL1Q6ZQY3 521 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 ANKRD23Q86SG2 305 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 CERS3Q8IU89 383 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 ERO1AQ96HE7 468 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 DNAJC18Q9H819 358 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 ECHDC1Q9NTX5 307 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 HERC5Q9UII4 1024 aaKnown RBP11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 TRIM17Q9Y577 477 aa11.45□□□□□ -0.58
CDC42EP3-203ENST00000453555 GDF11O95390 407 aa11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 ADD2P35612 726 aa11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 JAG1P78504 1218 aa11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 GPAT2Q6NUI2 795 aa11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 TMED8Q6PL24 325 aaPredicted RBP11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 LCORLQ8N3X6 602 aa11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 CRNKL1Q9BZJ0 848 aaKnown RBP11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 ARMT1Q9H993 441 aa11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 LOC285556D6RIA3 1793 aa11.44□□□□□ -0.58
CDC42EP3-203ENST00000453555 A0A0G2JLL6 359 aaPredicted RBP11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 TLR2O60603 784 aa11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 MBD4O95243 580 aa11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 CAP1Q01518 475 aa11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 PKN2Q16513 984 aaKnown RBP11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 SHROOM1Q2M3G4 852 aaPredicted RBP11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 OTOP1Q7RTM1 612 aa11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 PRRT2Q7Z6L0 340 aaPredicted RBP11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 OTUD7AQ8TE49 926 aaPredicted RBP11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 SDR42E1Q8WUS8 393 aa11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 ZCCHC17Q9NP64 241 aaKnown RBP11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 CPA4Q9UI42 421 aa11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 HPS5Q9UPZ3 1129 aa11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 SUPT16HQ9Y5B9 1047 aaKnown RBP11.43□□□□□ -0.58
CDC42EP3-203ENST00000453555 USP17L5A8MUK1 530 aa11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 PRKAB2O43741 272 aa11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 POLR3DP05423 398 aaPredicted RBP11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 CYP2C8P10632 490 aa11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 SPP2Q13103 211 aa11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 ANKRD45Q5TZF3 282 aa11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 FBXO46Q6PJ61 603 aaPredicted RBP11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 FASTKD5Q7L8L6 764 aaKnown RBP11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 TTC6Q86TZ1 520 aa11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 METTL16Q86W50 562 aaKnown RBP11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 EXOC6Q8TAG9 804 aa11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 EFCC1Q9HA90 598 aa11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 MCM9Q9NXL9 1143 aa11.42□□□□□ -0.58
CDC42EP3-203ENST00000453555 ASNSP08243 561 aa11.41□□□□□ -0.58
CDC42EP3-203ENST00000453555 PLCD1P51178 756 aa11.41□□□□□ -0.58
CDC42EP3-203ENST00000453555 HMGCS2P54868 508 aa11.41□□□□□ -0.58
CDC42EP3-203ENST00000453555 TREML2Q5T2D2 321 aa11.41□□□□□ -0.58
CDC42EP3-203ENST00000453555 ZSCAN25Q6NSZ9 544 aa11.41□□□□□ -0.58
CDC42EP3-203ENST00000453555 ZNF280CQ8ND82 737 aa11.41□□□□□ -0.58
CDC42EP3-203ENST00000453555 ARHGAP39Q9C0H5 1083 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms