RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 GDF11O95390 407 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 BACE1P56817 501 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 MTMR2Q13614 643 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 MTFR1Q15390 333 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 ANKRD13CQ8N6S4 541 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 NKX2-3Q8TAU0 364 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 COA7Q96BR5 231 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
SRRT-205ENST00000449389 EHD4Q9H223 541 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 TMOD4Q9NZQ9 345 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
SRRT-205ENST00000449389 PDE6AP16499 860 aa13.12□□□□□ -0.31
SRRT-205ENST00000449389 FLT3LGP49771 235 aa13.12□□□□□ -0.31
SRRT-205ENST00000449389 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
SRRT-205ENST00000449389 JAG1P78504 1218 aa13.12□□□□□ -0.31
SRRT-205ENST00000449389 IRF5Q13568 498 aa13.12□□□□□ -0.31
SRRT-205ENST00000449389 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
SRRT-205ENST00000449389 DNAJC2Q99543 621 aaKnown RBP13.12□□□□□ -0.31
SRRT-205ENST00000449389 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
SRRT-205ENST00000449389 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
SRRT-205ENST00000449389 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
SRRT-205ENST00000449389 MGAMO43451 1857 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 MAGEB6P1A0A0J9YX57 407 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 GOLIM4O00461 696 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 ADCY3O60266 1144 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 GJB1P08034 283 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 CCL5P13501 91 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
SRRT-205ENST00000449389 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 PXYLP1Q8TE99 480 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 GCC1Q96CN9 775 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 CRNKL1Q9BZJ0 848 aaKnown RBP13.11□□□□□ -0.31
SRRT-205ENST00000449389 RNF208Q9H0X6 261 aa13.11□□□□□ -0.31
SRRT-205ENST00000449389 GH2P01242 217 aa13.1□□□□□ -0.31
SRRT-205ENST00000449389 GJA8P48165 433 aa13.1□□□□□ -0.31
SRRT-205ENST00000449389 SHROOM1Q2M3G4 852 aaPredicted RBP13.1□□□□□ -0.31
SRRT-205ENST00000449389 SHISA4Q96DD7 197 aa13.1□□□□□ -0.31
SRRT-205ENST00000449389 MORF4L1Q9UBU8 362 aa13.1□□□□□ -0.31
SRRT-205ENST00000449389 ZNF532Q9HCE3 1301 aa13.1□□□□□ -0.31
SRRT-205ENST00000449389 POLR3DP05423 398 aaPredicted RBP13.09□□□□□ -0.31
SRRT-205ENST00000449389 ELNP15502 786 aa13.09□□□□□ -0.31
SRRT-205ENST00000449389 ATP5JP18859 108 aa13.09□□□□□ -0.31
SRRT-205ENST00000449389 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
SRRT-205ENST00000449389 USP17L2Q6R6M4 530 aa13.09□□□□□ -0.31
SRRT-205ENST00000449389 GTF3C2Q8WUA4 911 aaPredicted RBP13.09□□□□□ -0.31
SRRT-205ENST00000449389 P2RX7Q99572 595 aaKnown RBP13.09□□□□□ -0.31
SRRT-205ENST00000449389 BCL11AQ9H165 835 aa13.09□□□□□ -0.31
SRRT-205ENST00000449389 PAG1Q9NWQ8 432 aa13.09□□□□□ -0.31
SRRT-205ENST00000449389 MYH1P12882 1939 aa13.09□□□□□ -0.31
SRRT-205ENST00000449389 TCRBV5S4A2TA0A5A2 114 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 INHAP05111 366 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 CAPN2P17655 700 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 USP14P54578 494 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 HERVK_113P62684 666 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 ABCB5Q2M3G0 1257 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 CERKLQ49MI3 558 aaPredicted RBP13.08□□□□□ -0.32
SRRT-205ENST00000449389 U2AF1L4Q8WU68 220 aaKnown RBP13.08□□□□□ -0.32
SRRT-205ENST00000449389 C12orf42Q96LP6 360 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 FEZ1Q99689 392 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 LRRCC1Q9C099 1032 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.08□□□□□ -0.322e-6■■■□□ 17.1
SRRT-205ENST00000449389 UNC93B1Q9H1C4 597 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 CABP5Q9NP86 173 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 TAOK2Q9UL54 1235 aa13.08□□□□□ -0.32
SRRT-205ENST00000449389 SHMT1P34896 483 aa13.07□□□□□ -0.32
SRRT-205ENST00000449389 PLCD1P51178 756 aa13.07□□□□□ -0.32
SRRT-205ENST00000449389 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
SRRT-205ENST00000449389 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
SRRT-205ENST00000449389 GPRC5AQ8NFJ5 357 aa13.07□□□□□ -0.32
SRRT-205ENST00000449389 EDC3Q96F86 508 aaKnown RBP13.07□□□□□ -0.32
SRRT-205ENST00000449389 HAUS7Q99871 368 aa13.07□□□□□ -0.32
SRRT-205ENST00000449389 KIAA1683Q9H0B3 1180 aa13.07□□□□□ -0.32
SRRT-205ENST00000449389 BOLA2Q9H3K6 86 aa13.07□□□□□ -0.32
SRRT-205ENST00000449389 DDX60LQ5H9U9 1706 aaKnown RBP13.07□□□□□ -0.32
SRRT-205ENST00000449389 CEP290O15078 2479 aa13.06□□□□□ -0.32
SRRT-205ENST00000449389 SGPL1O95470 568 aa13.06□□□□□ -0.32
SRRT-205ENST00000449389 ADD2P35612 726 aa13.06□□□□□ -0.32
SRRT-205ENST00000449389 GABPAQ06546 454 aa13.06□□□□□ -0.32
SRRT-205ENST00000449389 ARMT1Q9H993 441 aa13.06□□□□□ -0.32
SRRT-205ENST00000449389 DCP1AQ9NPI6 582 aaPredicted RBP13.06□□□□□ -0.32
SRRT-205ENST00000449389 GJD2Q9UKL4 321 aa13.06□□□□□ -0.32
SRRT-205ENST00000449389 NAV1Q8NEY1 1877 aa13.06□□□□□ -0.32
SRRT-205ENST00000449389 USP17L15C9J2P7 530 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 USP17L13C9JLJ4 530 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 USP17L11C9JVI0 530 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 USP17L18D6R9N7 530 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 USP17L22D6RA61 530 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 USP17L17D6RBQ6 530 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 USP17L19D6RCP7 530 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 USP17L20D6RJB6 530 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 FARP2O94887 1054 aaPredicted RBP13.05□□□□□ -0.32
SRRT-205ENST00000449389 MBD4O95243 580 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 HMGCRP04035 888 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 MAPK4P31152 587 aa13.05□□□□□ -0.32
SRRT-205ENST00000449389 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms