RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CLEC11AQ9Y240 323 aa17.24■□□□□ 0.35
TNF-208ENST00000449264 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
TNF-208ENST00000449264 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
TNF-208ENST00000449264 NBPF12Q5TAG4 269 aaPredicted RBP17.23■□□□□ 0.35
TNF-208ENST00000449264 KRT26Q7Z3Y9 468 aa17.23■□□□□ 0.35
TNF-208ENST00000449264 ZC3H15Q8WU90 426 aaKnown RBP17.23■□□□□ 0.35
TNF-208ENST00000449264 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
TNF-208ENST00000449264 HERC5Q9UII4 1024 aaKnown RBP17.23■□□□□ 0.35
TNF-208ENST00000449264 PPP2R3BQ9Y5P8 575 aa17.23■□□□□ 0.35
TNF-208ENST00000449264 WDR19Q8NEZ3 1342 aa17.23■□□□□ 0.35
TNF-208ENST00000449264 MPHOSPH10O00566 681 aaKnown RBP17.23■□□□□ 0.35
TNF-208ENST00000449264 IFIT3O14879 490 aaKnown RBP17.23■□□□□ 0.35
TNF-208ENST00000449264 TOB2Q14106 344 aaPredicted RBP17.23■□□□□ 0.35
TNF-208ENST00000449264 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
TNF-208ENST00000449264 TMEM67Q5HYA8 995 aa17.23■□□□□ 0.35
TNF-208ENST00000449264 IQCA1Q86XH1 822 aa17.23■□□□□ 0.35
TNF-208ENST00000449264 BRF1Q92994 677 aa17.23■□□□□ 0.35
TNF-208ENST00000449264 TNKSO95271 1327 aa17.22■□□□□ 0.35
TNF-208ENST00000449264 ERICH2A1L162 156 aa17.22■□□□□ 0.35
TNF-208ENST00000449264 NMT2O60551 498 aa17.22■□□□□ 0.35
TNF-208ENST00000449264 AKR1B1P15121 316 aa17.22■□□□□ 0.35
TNF-208ENST00000449264 DLK2Q6UY11 383 aa17.22■□□□□ 0.35
TNF-208ENST00000449264 METTL16Q86W50 562 aaKnown RBP17.22■□□□□ 0.35
TNF-208ENST00000449264 SNX21Q969T3 373 aa17.22■□□□□ 0.35
TNF-208ENST00000449264 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
TNF-208ENST00000449264 ATAD5Q96QE3 1844 aa17.21■□□□□ 0.35
TNF-208ENST00000449264 GREB1LQ9C091 1923 aaPredicted RBP17.21■□□□□ 0.35
TNF-208ENST00000449264 SH2B2O14492 632 aaPredicted RBP17.21■□□□□ 0.35
TNF-208ENST00000449264 GDF11O95390 407 aa17.21■□□□□ 0.35
TNF-208ENST00000449264 BECN1Q14457 450 aa17.21■□□□□ 0.35
TNF-208ENST00000449264 ANKRD1Q15327 319 aa17.21■□□□□ 0.35
TNF-208ENST00000449264 CERKLQ49MI3 558 aaPredicted RBP17.21■□□□□ 0.35
TNF-208ENST00000449264 TMEM87BQ96K49 555 aa17.21■□□□□ 0.35
TNF-208ENST00000449264 ZSCAN10Q96SZ4 725 aaPredicted RBP17.21■□□□□ 0.35
TNF-208ENST00000449264 NAP1L2Q9ULW6 460 aaPredicted RBP17.21■□□□□ 0.35
TNF-208ENST00000449264 ANGEL1Q9UNK9 670 aaKnown RBP17.21■□□□□ 0.35
TNF-208ENST00000449264 SSC5DA1L4H1 1573 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 WTAPQ15007 396 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 SHROOM1Q2M3G4 852 aaPredicted RBP17.2■□□□□ 0.34
TNF-208ENST00000449264 TATDN1Q6P1N9 297 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 USP48Q86UV5 1035 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 GLIS2Q9BZE0 524 aaPredicted RBP17.2■□□□□ 0.34
TNF-208ENST00000449264 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
TNF-208ENST00000449264 TBC1D12O60347 775 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 MCM2P49736 904 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 NT5C2P49902 561 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 NFXL1Q6ZNB6 911 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
TNF-208ENST00000449264 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
TNF-208ENST00000449264 LY9Q9HBG7 655 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 SENP2Q9HC62 589 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
TNF-208ENST00000449264 PLIN4Q96Q06 1357 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 DCAF15Q66K64 600 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 MAP1SQ66K74 1059 aaPredicted RBP17.19■□□□□ 0.34
TNF-208ENST00000449264 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 NEDD1Q8NHV4 660 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 IGDCC4Q8TDY8 1250 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 HOOK2Q96ED9 719 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 IL17RBQ9NRM6 502 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 TPCN1Q9ULQ1 816 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 FZD1Q9UP38 647 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 MYH4Q9Y623 1939 aa17.19■□□□□ 0.34
TNF-208ENST00000449264 PRKG1Q13976 671 aa17.18■□□□□ 0.34
TNF-208ENST00000449264 RRP1BQ14684 758 aaKnown RBP17.18■□□□□ 0.34
TNF-208ENST00000449264 ABCB5Q2M3G0 1257 aa17.18■□□□□ 0.34
TNF-208ENST00000449264 SUPT20HL1Q3ZLR7 823 aa17.18■□□□□ 0.34
TNF-208ENST00000449264 IFIT1BQ5T764 474 aaKnown RBP17.18■□□□□ 0.34
TNF-208ENST00000449264 CDCA5Q96FF9 252 aa17.18■□□□□ 0.34
TNF-208ENST00000449264 CCDC17Q96LX7 622 aa17.18■□□□□ 0.34
TNF-208ENST00000449264 AGXT2Q9BYV1 514 aa17.18■□□□□ 0.34
TNF-208ENST00000449264 STX8Q9UNK0 236 aa17.18■□□□□ 0.34
TNF-208ENST00000449264 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
TNF-208ENST00000449264 DOCK1Q14185 1865 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 KLF18A0A0U1RQI7 1052 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 CCDC69A6NI79 296 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 LARGE1O95461 756 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 SLC4A3P48751 1232 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 STK3Q13188 491 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 SEC23AQ15436 765 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 CDC37L1Q7L3B6 337 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 LDHDQ86WU2 507 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 CEP95Q96GE4 821 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 MTA3Q9BTC8 594 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.17■□□□□ 0.34
TNF-208ENST00000449264 ZNF341Q9BYN7 854 aa17.17■□□□□ 0.34
TNF-208ENST00000449264 GOLGA8BA8MQT2 603 aa17.16■□□□□ 0.34
TNF-208ENST00000449264 GH2P01242 217 aa17.16■□□□□ 0.34
TNF-208ENST00000449264 MAP3K10Q02779 954 aa17.16■□□□□ 0.34
TNF-208ENST00000449264 RAB3GAP1Q15042 981 aa17.16■□□□□ 0.34
TNF-208ENST00000449264 FBXL16Q8N461 479 aa17.16■□□□□ 0.34
TNF-208ENST00000449264 TMX3Q96JJ7 454 aa17.16■□□□□ 0.34
TNF-208ENST00000449264 CABP5Q9NP86 173 aa17.16■□□□□ 0.34
TNF-208ENST00000449264 TCP11L1Q9NUJ3 509 aa17.16■□□□□ 0.34
TNF-208ENST00000449264 DAXXQ9UER7 740 aaPredicted RBP17.16■□□□□ 0.34
TNF-208ENST00000449264 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
TNF-208ENST00000449264 OTOFQ9HC10 1997 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms