RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 SBK1Q52WX2 424 aa8.12□□□□□ -1.11
RFC4-209ENST00000448497 LARP1BQ659C4 914 aaKnown RBP8.12□□□□□ -1.11
RFC4-209ENST00000448497 MFSD6Q6ZSS7 791 aa8.12□□□□□ -1.11
RFC4-209ENST00000448497 TMTC2Q8N394 836 aa8.12□□□□□ -1.11
RFC4-209ENST00000448497 NSUN7Q8NE18 718 aaKnown RBP8.12□□□□□ -1.11
RFC4-209ENST00000448497 IGDCC4Q8TDY8 1250 aa8.12□□□□□ -1.11
RFC4-209ENST00000448497 CRNKL1Q9BZJ0 848 aaKnown RBP8.12□□□□□ -1.11
RFC4-209ENST00000448497 COA1Q9GZY4 146 aa8.12□□□□□ -1.11
RFC4-209ENST00000448497 TMEM134Q9H6X4 195 aa8.12□□□□□ -1.11
RFC4-209ENST00000448497 STK32BQ9NY57 414 aa8.12□□□□□ -1.11
RFC4-209ENST00000448497 POLLQ9UGP5 575 aa8.12□□□□□ -1.11
RFC4-209ENST00000448497 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
RFC4-209ENST00000448497 NSFL1CQ9UNZ2 370 aaKnown RBP8.12□□□□□ -1.11
RFC4-209ENST00000448497 ECM29Q5VYK3 1845 aa8.12□□□□□ -1.11
RFC4-209ENST00000448497 MYH1P12882 1939 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 GOLGA8CPA6NN73 597 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 C3orf80F5H4A9 247 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 SMAPO00193 183 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 PRKAB2O43741 272 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 CTDNEP1O95476 244 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 MBD3O95983 291 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 LDHBP07195 334 aaKnown RBP8.11□□□□□ -1.11
RFC4-209ENST00000448497 PRDX5P30044 214 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 TDO2P48775 406 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 PPARAQ07869 468 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 APOBRQ0VD83 1088 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 TTLL12Q14166 644 aaPredicted RBP8.11□□□□□ -1.11
RFC4-209ENST00000448497 PPP2R5BQ15173 497 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 CSPP1Q1MSJ5 1256 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 GRIPAP1Q4V328 841 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 CC2D2BQ6DHV5 1058 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 MCTP1Q6DN14 999 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 SLF2Q8IX21 1173 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 SLC16A10Q8TF71 515 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 ZFRQ96KR1 1074 aaKnown RBP8.11□□□□□ -1.11
RFC4-209ENST00000448497 PHOX2BQ99453 314 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 ZSCAN16Q9H4T2 348 aaPredicted RBP8.11□□□□□ -1.11
RFC4-209ENST00000448497 GPCPD1Q9NPB8 672 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 MKRN1Q9UHC7 482 aaKnown RBP8.11□□□□□ -1.11
RFC4-209ENST00000448497 HPS5Q9UPZ3 1129 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 SNED1Q8TER0 1413 aa8.11□□□□□ -1.11
RFC4-209ENST00000448497 ROBO3Q96MS0 1386 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 GAKO14976 1311 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 NEDD4P46934 1319 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 ORC4O43929 436 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 BAG3O95817 575 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 BAG6P46379 1132 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 FKBP1AP62942 108 aaKnown RBP8.1□□□□□ -1.11
RFC4-209ENST00000448497 SART3Q15020 963 aaKnown RBP8.1□□□□□ -1.11
RFC4-209ENST00000448497 EZH2Q15910 746 aaKnown RBP8.1□□□□□ -1.11
RFC4-209ENST00000448497 ATL3Q6DD88 541 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 APOA5Q6Q788 366 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 CYB5R4Q7L1T6 521 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 DZIP1Q86YF9 867 aaKnown RBP8.1□□□□□ -1.11
RFC4-209ENST00000448497 CCDC125Q86Z20 511 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 MPNDQ8N594 471 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 MIGA1Q8NAN2 632 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 RTFDC1Q9BY42 306 aaPredicted RBP8.1□□□□□ -1.11
RFC4-209ENST00000448497 LRRC2Q9BYS8 371 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 LY9Q9HBG7 655 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 DCP1AQ9NPI6 582 aaPredicted RBP8.1□□□□□ -1.11
RFC4-209ENST00000448497 ZSWIM5Q9P217 1185 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 ARPP21Q9UBL0 812 aaPredicted RBP8.1□□□□□ -1.11
RFC4-209ENST00000448497 BRPF3Q9ULD4 1205 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.1□□□□□ -1.11
RFC4-209ENST00000448497 TACC3Q9Y6A5 838 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 C10orf71Q711Q0 1435 aa8.1□□□□□ -1.11
RFC4-209ENST00000448497 MROH7-TTC4A0A0A0MT08 1334 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 ELP1O95163 1332 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 GPR75-ASB3A0A0A6YYF3 556 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 KLF18A0A0U1RQI7 1052 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 FSD2A1L4K1 749 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 PTPDC1A2A3K4 754 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 B4E1Z4 1266 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 H0YIN7 160 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 JAK2O60674 1132 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 KDM4AO75164 1064 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 CDKL5O76039 1030 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 DEKP35659 375 aaKnown RBP8.09□□□□□ -1.11
RFC4-209ENST00000448497 DYNLL1P63167 89 aaKnown RBP8.09□□□□□ -1.11
RFC4-209ENST00000448497 CHAF1AQ13111 956 aaPredicted RBP8.09□□□□□ -1.11
RFC4-209ENST00000448497 STK3Q13188 491 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 CTR9Q6PD62 1173 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 SULF1Q8IWU6 871 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 ESR2Q92731 530 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 EYA3Q99504 573 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 MRIQ9BWK5 157 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 TMX4Q9H1E5 349 aaPredicted RBP8.09□□□□□ -1.11
RFC4-209ENST00000448497 DDX49Q9Y6V7 483 aaKnown RBP8.09□□□□□ -1.11
RFC4-209ENST00000448497 MYH8P13535 1937 aa8.09□□□□□ -1.11
RFC4-209ENST00000448497 STK36Q9NRP7 1315 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 SCN9AQ15858 1988 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 GOLGA8BA8MQT2 603 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 C6orf229H3BNL8 230 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 PRPF40AO75400 957 aaKnown RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 SLC3A2P08195 630 aaKnown RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 FDPSP14324 419 aaKnown RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 ZNF445P59923 1031 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 MDM2Q00987 491 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms