RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TSPY3P0CV98 308 aa23■■□□□ 1.27
SGCE-207ENST00000447873 TSPY8P0CW00 308 aa23■■□□□ 1.27
SGCE-207ENST00000447873 SLURP2P0DP57 97 aa23■■□□□ 1.27
SGCE-207ENST00000447873 NOL8Q76FK4 1167 aaKnown RBP23■■□□□ 1.27
SGCE-207ENST00000447873 IQCA1Q86XH1 822 aa23■■□□□ 1.27
SGCE-207ENST00000447873 SULF1Q8IWU6 871 aa23■■□□□ 1.27
SGCE-207ENST00000447873 TMEM87BQ96K49 555 aa23■■□□□ 1.27
SGCE-207ENST00000447873 ZKSCAN3Q9BRR0 538 aa23■■□□□ 1.27
SGCE-207ENST00000447873 DNAJC18Q9H819 358 aa23■■□□□ 1.27
SGCE-207ENST00000447873 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23■■□□□ 1.27
SGCE-207ENST00000447873 MTA3Q9BTC8 594 aa22.99■■□□□ 1.27
SGCE-207ENST00000447873 ERICH2A1L162 156 aa22.98■■□□□ 1.27
SGCE-207ENST00000447873 IFIT3O14879 490 aaKnown RBP22.98■■□□□ 1.27
SGCE-207ENST00000447873 TOB2Q14106 344 aaPredicted RBP22.98■■□□□ 1.27
SGCE-207ENST00000447873 TMEM67Q5HYA8 995 aa22.98■■□□□ 1.27
SGCE-207ENST00000447873 TATDN1Q6P1N9 297 aa22.98■■□□□ 1.27
SGCE-207ENST00000447873 MIGA2Q7L4E1 593 aa22.98■■□□□ 1.27
SGCE-207ENST00000447873 FBXL16Q8N461 479 aa22.98■■□□□ 1.27
SGCE-207ENST00000447873 BRF1Q92994 677 aa22.98■■□□□ 1.27
SGCE-207ENST00000447873 TBC1D2Q9BYX2 928 aa22.98■■□□□ 1.27
SGCE-207ENST00000447873 CLEC11AQ9Y240 323 aa22.98■■□□□ 1.27
SGCE-207ENST00000447873 TBC1D12O60347 775 aa22.97■■□□□ 1.27
SGCE-207ENST00000447873 CERKLQ49MI3 558 aaPredicted RBP22.97■■□□□ 1.27
SGCE-207ENST00000447873 ZNF526Q8TF50 670 aaPredicted RBP22.97■■□□□ 1.27
SGCE-207ENST00000447873 HOOK2Q96ED9 719 aa22.97■■□□□ 1.27
SGCE-207ENST00000447873 ZSCAN10Q96SZ4 725 aaPredicted RBP22.97■■□□□ 1.27
SGCE-207ENST00000447873 AGXT2Q9BYV1 514 aa22.97■■□□□ 1.27
SGCE-207ENST00000447873 ANGEL1Q9UNK9 670 aaKnown RBP22.97■■□□□ 1.27
SGCE-207ENST00000447873 NBPF12Q5TAG4 269 aaPredicted RBP22.97■■□□□ 1.27
SGCE-207ENST00000447873 PRAMEF18Q5VWM3 479 aa22.97■■□□□ 1.27
SGCE-207ENST00000447873 KRT26Q7Z3Y9 468 aa22.97■■□□□ 1.27
SGCE-207ENST00000447873 IGDCC4Q8TDY8 1250 aa22.97■■□□□ 1.27
SGCE-207ENST00000447873 CCDC17Q96LX7 622 aa22.97■■□□□ 1.27
SGCE-207ENST00000447873 LARP6Q9BRS8 491 aaKnown RBP22.97■■□□□ 1.27
SGCE-207ENST00000447873 LIMCH1Q9UPQ0 1083 aa22.97■■□□□ 1.27
SGCE-207ENST00000447873 TNKSO95271 1327 aa22.96■■□□□ 1.27
SGCE-207ENST00000447873 K7ELQ4 463 aaPredicted RBP22.96■■□□□ 1.27
SGCE-207ENST00000447873 SH2B2O14492 632 aaPredicted RBP22.96■■□□□ 1.27
SGCE-207ENST00000447873 AKR1B1P15121 316 aa22.96■■□□□ 1.27
SGCE-207ENST00000447873 NEDD1Q8NHV4 660 aa22.96■■□□□ 1.27
SGCE-207ENST00000447873 GPHNQ9NQX3 736 aaPredicted RBP22.96■■□□□ 1.27
SGCE-207ENST00000447873 MPHOSPH10O00566 681 aaKnown RBP22.95■■□□□ 1.26
SGCE-207ENST00000447873 NMT2O60551 498 aa22.95■■□□□ 1.26
SGCE-207ENST00000447873 MAP3K10Q02779 954 aa22.95■■□□□ 1.26
SGCE-207ENST00000447873 WTAPQ15007 396 aa22.95■■□□□ 1.26
SGCE-207ENST00000447873 SUPT20HL1Q3ZLR7 823 aa22.95■■□□□ 1.26
SGCE-207ENST00000447873 NMRK2Q9NPI5 230 aa22.95■■□□□ 1.26
SGCE-207ENST00000447873 ADM5C9JUS6 153 aa22.94■■□□□ 1.26
SGCE-207ENST00000447873 LIFRP42702 1097 aa22.94■■□□□ 1.26
SGCE-207ENST00000447873 CCDC178Q5BJE1 867 aa22.94■■□□□ 1.26
SGCE-207ENST00000447873 DCAF15Q66K64 600 aa22.94■■□□□ 1.26
SGCE-207ENST00000447873 LY9Q9HBG7 655 aa22.94■■□□□ 1.26
SGCE-207ENST00000447873 TCP11L1Q9NUJ3 509 aa22.94■■□□□ 1.26
SGCE-207ENST00000447873 DAXXQ9UER7 740 aaPredicted RBP22.94■■□□□ 1.26
SGCE-207ENST00000447873 APOBRQ0VD83 1088 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 NFXL1Q6ZNB6 911 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 USP48Q86UV5 1035 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 TMTC2Q8N394 836 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 ENAHQ8N8S7 591 aaPredicted RBP22.93■■□□□ 1.26
SGCE-207ENST00000447873 IL17RBQ9NRM6 502 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 TPCN1Q9ULQ1 816 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 PLIN4Q96Q06 1357 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 GDF11O95390 407 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 POTEIP0CG38 1075 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 POTEJP0CG39 1038 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 SEC23AQ15436 765 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 ABCB5Q2M3G0 1257 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 CDC37L1Q7L3B6 337 aa22.93■■□□□ 1.26
SGCE-207ENST00000447873 ZSCAN31Q96LW9 406 aaPredicted RBP22.93■■□□□ 1.26
SGCE-207ENST00000447873 IPO9Q96P70 1041 aaKnown RBP22.93■■□□□ 1.26
SGCE-207ENST00000447873 NAP1L2Q9ULW6 460 aaPredicted RBP22.93■■□□□ 1.26
SGCE-207ENST00000447873 CCDC69A6NI79 296 aa22.92■■□□□ 1.26
SGCE-207ENST00000447873 IFIT1BQ5T764 474 aaKnown RBP22.92■■□□□ 1.26
SGCE-207ENST00000447873 DGKHQ86XP1 1220 aa22.92■■□□□ 1.26
SGCE-207ENST00000447873 TMX3Q96JJ7 454 aa22.92■■□□□ 1.26
SGCE-207ENST00000447873 SENP2Q9HC62 589 aa22.92■■□□□ 1.26
SGCE-207ENST00000447873 CABP5Q9NP86 173 aa22.92■■□□□ 1.26
SGCE-207ENST00000447873 KLF18A0A0U1RQI7 1052 aa22.91■■□□□ 1.26
SGCE-207ENST00000447873 SGMS1Q86VZ5 419 aa22.91■■□□□ 1.26
SGCE-207ENST00000447873 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.91■■□□□ 1.26
SGCE-207ENST00000447873 ZNF341Q9BYN7 854 aa22.91■■□□□ 1.26
SGCE-207ENST00000447873 STX8Q9UNK0 236 aa22.91■■□□□ 1.26
SGCE-207ENST00000447873 GREB1LQ9C091 1923 aaPredicted RBP22.91■■□□□ 1.26
SGCE-207ENST00000447873 EVCP57679 992 aa22.9■■□□□ 1.26
SGCE-207ENST00000447873 RRP1BQ14684 758 aaKnown RBP22.9■■□□□ 1.26
SGCE-207ENST00000447873 DLK2Q6UY11 383 aa22.9■■□□□ 1.26
SGCE-207ENST00000447873 TMEM179Q6ZVK1 233 aa22.9■■□□□ 1.26
SGCE-207ENST00000447873 LDHDQ86WU2 507 aa22.9■■□□□ 1.26
SGCE-207ENST00000447873 CEP95Q96GE4 821 aa22.9■■□□□ 1.26
SGCE-207ENST00000447873 GLIS2Q9BZE0 524 aaPredicted RBP22.9■■□□□ 1.26
SGCE-207ENST00000447873 SH2B1Q9NRF2 756 aaPredicted RBP22.9■■□□□ 1.26
SGCE-207ENST00000447873 BRPF3Q9ULD4 1205 aa22.9■■□□□ 1.26
SGCE-207ENST00000447873 ME3Q16798 604 aa22.89■■□□□ 1.26
SGCE-207ENST00000447873 MAP1SQ66K74 1059 aaPredicted RBP22.89■■□□□ 1.26
SGCE-207ENST00000447873 CDCA5Q96FF9 252 aa22.89■■□□□ 1.26
SGCE-207ENST00000447873 ZNF274Q96GC6 653 aaPredicted RBP22.89■■□□□ 1.26
SGCE-207ENST00000447873 SLC12A7Q9Y666 1083 aa22.89■■□□□ 1.26
SGCE-207ENST00000447873 IGKV6D-41A0A0C4DH26 115 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 PHF20L1A8MW92 1017 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 LARGE1O95461 756 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms