RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GRIK3Q13003 919 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 G3BP1Q13283 466 aaKnown RBP eCLIP21.72■■□□□ 1.07
HMGA1-205ENST00000447654 KARSQ15046 597 aaKnown RBP21.72■■□□□ 1.07
HMGA1-205ENST00000447654 NBPF9Q3BBW0 867 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 LINC00301Q8NCQ3 95 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 NAPGQ99747 312 aaPredicted RBP21.72■■□□□ 1.07
HMGA1-205ENST00000447654 CRACR2AQ9BSW2 395 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 FTOQ9C0B1 505 aaKnown RBP eCLIP21.72■■□□□ 1.07
HMGA1-205ENST00000447654 POLR3EQ9NVU0 708 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 EVA1CP58658 441 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 OLFM4Q6UX06 510 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 NSUN7Q8NE18 718 aaKnown RBP21.71■■□□□ 1.07
HMGA1-205ENST00000447654 RPGRIP1Q96KN7 1286 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 SH3GL2Q99962 352 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 TTF2Q9UNY4 1162 aaKnown RBP21.71■■□□□ 1.07
HMGA1-205ENST00000447654 GRIN2DO15399 1336 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 NHSL1Q5SYE7 1610 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 GOLGA8KD6RF30 607 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 SKOR1P84550 965 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 PLBD2Q8NHP8 589 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 KLC4Q9NSK0 619 aa21.71■■□□□ 1.07
HMGA1-205ENST00000447654 A0A087WZG4 1122 aa21.7■■□□□ 1.06
HMGA1-205ENST00000447654 TMEM232C9JQI7 657 aa21.7■■□□□ 1.06
HMGA1-205ENST00000447654 CMA1P23946 247 aa21.7■■□□□ 1.06
HMGA1-205ENST00000447654 USP14P54578 494 aa21.7■■□□□ 1.06
HMGA1-205ENST00000447654 INTS13Q9NVM9 706 aa21.7■■□□□ 1.06
HMGA1-205ENST00000447654 TOGARAM1Q9Y4F4 1720 aa21.7■■□□□ 1.06
HMGA1-205ENST00000447654 SLC8A3P57103 927 aa21.7■■□□□ 1.06
HMGA1-205ENST00000447654 PTPN12Q05209 780 aaKnown RBP21.7■■□□□ 1.06
HMGA1-205ENST00000447654 NMIQ13287 307 aaPredicted RBP21.7■■□□□ 1.06
HMGA1-205ENST00000447654 SF3A1Q15459 793 aaKnown RBP21.7■■□□□ 1.06
HMGA1-205ENST00000447654 RASGRP2Q7LDG7 609 aa21.7■■□□□ 1.06
HMGA1-205ENST00000447654 NEK1Q96PY6 1258 aa21.7■■□□□ 1.06
HMGA1-205ENST00000447654 BIN1O00499 593 aa21.69■■□□□ 1.06
HMGA1-205ENST00000447654 IRF6O14896 467 aa21.69■■□□□ 1.06
HMGA1-205ENST00000447654 STK38Q15208 465 aa21.69■■□□□ 1.06
HMGA1-205ENST00000447654 PDILTQ8N807 584 aa21.69■■□□□ 1.06
HMGA1-205ENST00000447654 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.69■■□□□ 1.06
HMGA1-205ENST00000447654 GOLGA8FQ08AF8 430 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 GOLGA8DPQ0D2H9 430 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 RABL6Q3YEC7 729 aaPredicted RBP21.68■■□□□ 1.06
HMGA1-205ENST00000447654 ZNF569Q5MCW4 686 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 TCEANC2Q96MN5 208 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 PAPPAQ13219 1627 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 RASSF9O75901 435 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 SH3GL3Q99963 347 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 VCPKMTQ9H867 229 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 BTG4Q9NY30 223 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 SALL1Q9NSC2 1324 aa21.68■■□□□ 1.06
HMGA1-205ENST00000447654 HMGB1P09429 215 aaKnown RBP21.67■■□□□ 1.06
HMGA1-205ENST00000447654 GGCXP38435 758 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 ADCY2Q08462 1091 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 CEP85LQ5SZL2 805 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 NAIF1Q69YI7 327 aaPredicted RBP21.67■■□□□ 1.06
HMGA1-205ENST00000447654 RUBCNQ92622 972 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 FANCLQ9NW38 375 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 AKR1B15C9JRZ8 316 aaPredicted RBP21.67■■□□□ 1.06
HMGA1-205ENST00000447654 MYO1FO00160 1098 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 PAX7P23759 505 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 RCSD1Q6JBY9 416 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 Q6ZUG5 572 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 ELOA2Q8IYF1 753 aaPredicted RBP21.67■■□□□ 1.06
HMGA1-205ENST00000447654 ARMC2Q8NEN0 867 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 DESI2Q9BSY9 194 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 CD248Q9HCU0 757 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 COPRSQ9NQ92 184 aa21.67■■□□□ 1.06
HMGA1-205ENST00000447654 TNS2Q63HR2 1409 aa21.66■■□□□ 1.06
HMGA1-205ENST00000447654 PTPDC1A2A3K4 754 aa21.66■■□□□ 1.06
HMGA1-205ENST00000447654 SPTLC2O15270 562 aa21.66■■□□□ 1.06
HMGA1-205ENST00000447654 EPB41P11171 864 aaKnown RBP21.66■■□□□ 1.06
HMGA1-205ENST00000447654 EZRP15311 586 aaKnown RBP21.66■■□□□ 1.06
HMGA1-205ENST00000447654 GNGT1P63211 74 aa21.66■■□□□ 1.06
HMGA1-205ENST00000447654 FAM210AQ96ND0 272 aa21.66■■□□□ 1.06
HMGA1-205ENST00000447654 BOLA2Q9H3K6 86 aa21.66■■□□□ 1.06
HMGA1-205ENST00000447654 ZBTB3Q9H5J0 574 aa21.66■■□□□ 1.06
HMGA1-205ENST00000447654 ATP6V0A4Q9HBG4 840 aa21.66■■□□□ 1.06
HMGA1-205ENST00000447654 SRRM3A6NNA2 597 aaPredicted RBP21.65■■□□□ 1.06
HMGA1-205ENST00000447654 ACTN3Q08043 901 aaPredicted RBP21.65■■□□□ 1.06
HMGA1-205ENST00000447654 COL9A3Q14050 684 aaPredicted RBP21.65■■□□□ 1.06
HMGA1-205ENST00000447654 EDC3Q96F86 508 aaKnown RBP21.65■■□□□ 1.06
HMGA1-205ENST00000447654 FAM227BQ96M60 508 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 MYO6Q9UM54 1294 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 OPA1O60313 960 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 CDR1P51861 262 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 FOXO4P98177 505 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 AMPD2Q01433 879 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 TFCP2Q12800 502 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 BRAPQ7Z569 592 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 CCDC51Q96ER9 411 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 IRX2Q9BZI1 471 aaPredicted RBP21.65■■□□□ 1.06
HMGA1-205ENST00000447654 NBPF3Q9H094 633 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 LZTFL1Q9NQ48 299 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 BATF3Q9NR55 127 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 ASAP1Q9ULH1 1129 aa21.65■■□□□ 1.06
HMGA1-205ENST00000447654 FAM237AA0A1B0GTK4 181 aa21.64■■□□□ 1.06
HMGA1-205ENST00000447654 AGPSO00116 658 aa21.64■■□□□ 1.06
HMGA1-205ENST00000447654 TOM1O60784 492 aa21.64■■□□□ 1.06
HMGA1-205ENST00000447654 FECHP22830 423 aa21.64■■□□□ 1.06
HMGA1-205ENST00000447654 ADKP55263 362 aaKnown RBP21.64■■□□□ 1.06
HMGA1-205ENST00000447654 INHBEP58166 350 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms