RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 TSPY3P0CV98 308 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 TSPY8P0CW00 308 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 RASA3Q14644 834 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 IQCA1Q86XH1 822 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 C10orf67Q8IYJ2 551 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 KIF2CQ99661 725 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 DSCC1Q9BVC3 393 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.87□□□□□ -1.31
PROM1-201ENST00000447510 WNT10BO00744 389 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 PPP1R12BO60237 982 aaPredicted RBP6.87□□□□□ -1.31
PROM1-201ENST00000447510 CASTP20810 708 aaKnown RBP6.87□□□□□ -1.31
PROM1-201ENST00000447510 IKQ13123 557 aaPredicted RBP6.87□□□□□ -1.31
PROM1-201ENST00000447510 DCAF15Q66K64 600 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 CREB3L3Q68CJ9 461 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 MIGA2Q7L4E1 593 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 TICAM2Q86XR7 235 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 NCOA7Q8NI08 942 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 UPF3BQ9BZI7 483 aaKnown RBP6.87□□□□□ -1.31
PROM1-201ENST00000447510 RSPH14Q9UHP6 348 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 STX8Q9UNK0 236 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 SPEF2Q9C093 1822 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 CASZ1Q86V15 1759 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 QSER1Q2KHR3 1735 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 CYP2D7A0A087X1C5 515 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 PTGS1P23219 599 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 MMP14P50281 582 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 PPARAQ07869 468 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 NCBP1Q09161 790 aaKnown RBP6.87□□□□□ -1.31
PROM1-201ENST00000447510 PRAMEF18Q5VWM3 479 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 GIMAP6Q6P9H5 292 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 ADGRA1Q86SQ6 560 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 USP48Q86UV5 1035 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 ESR2Q92731 530 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 CTDP1Q9Y5B0 961 aaPredicted RBP6.87□□□□□ -1.31
PROM1-201ENST00000447510 PCDHAC2Q9Y5I4 1007 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 ANKRD31Q8N7Z5 1873 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 TERF2Q15554 542 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 NEK1Q96PY6 1258 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 KRT23Q9C075 422 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 DHX36Q9H2U1 1008 aaKnown RBP6.86□□□□□ -1.31
PROM1-201ENST00000447510 CWC22Q9HCG8 908 aaKnown RBP6.86□□□□□ -1.31
PROM1-201ENST00000447510 DCP1AQ9NPI6 582 aaPredicted RBP6.86□□□□□ -1.31
PROM1-201ENST00000447510 CCDC69A6NI79 296 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 IFIT3O14879 490 aaKnown RBP6.86□□□□□ -1.31
PROM1-201ENST00000447510 SLFN14P0C7P3 912 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 PPP4CP60510 307 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 MAP1SQ66K74 1059 aaPredicted RBP6.86□□□□□ -1.31
PROM1-201ENST00000447510 TRPM4Q8TD43 1214 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 DEFB129Q9H1M3 183 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 CNNM2Q9H8M5 875 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 PI4KBQ9UBF8 816 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 RFX7Q2KHR2 1363 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 CYP2D6P10635 497 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 NFIAQ12857 509 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 APOBEC3HQ6NTF7 200 aaKnown RBP6.86□□□□□ -1.31
PROM1-201ENST00000447510 USP50Q70EL3 339 aaPredicted RBP6.86□□□□□ -1.31
PROM1-201ENST00000447510 NUP133Q8WUM0 1156 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 NMRK2Q9NPI5 230 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 PICK1Q9NRD5 415 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 SERPINB13Q9UIV8 391 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 CACNA1SQ13698 1873 aa6.86□□□□□ -1.31
PROM1-201ENST00000447510 GSG1L2A8MUP6 293 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 SLC27A2O14975 620 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 KDM4AO75164 1064 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 GTF2A1P52655 376 aaPredicted RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 CDC37L1Q7L3B6 337 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 DYNLL2Q96FJ2 89 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 FAM163AQ96GL9 167 aaPredicted RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 USP26Q9BXU7 913 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 TRIM5Q9C035 493 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 TMEM39BQ9GZU3 492 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 ZC3H4Q9UPT8 1303 aaKnown RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 FAM196BA6NMK8 535 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 B4E1Z4 1266 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 CPLX1O14810 134 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 HMGB1P09429 215 aaKnown RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 PRELPP51888 382 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 LRMPQ12912 555 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 TMEM67Q5HYA8 995 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 CPLX2Q6PUV4 134 aaKnown RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 CHST3Q7LGC8 479 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 NEK11Q8NG66 645 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 TCEANC2Q96MN5 208 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 LARP6Q9BRS8 491 aaKnown RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 MRIQ9BWK5 157 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 OSBPL5Q9H0X9 879 aaPredicted RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 PDRG1Q9NUG6 133 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 TRMT1Q9NXH9 659 aaKnown RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 CSADQ9Y600 493 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 FLT1P17948 1338 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 TCRBV5S4A2TA0A5A2 114 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 ENTPD3O75355 529 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 CAPN2P17655 700 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 HNRNPH2P55795 449 aaKnown RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 AKAP17AQ02040 695 aaKnown RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 SKIDA1Q1XH10 827 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 CERKLQ49MI3 558 aaPredicted RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 FAM47AQ5JRC9 791 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 AKNAD1Q5T1N1 836 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 CCDC186Q7Z3E2 898 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms