RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 BACE1P56817 501 aa25.18■■□□□ 1.62
SDC1-205ENST00000447124 PRKCZQ05513 592 aa25.18■■□□□ 1.62
SDC1-205ENST00000447124 ANKRD13CQ8N6S4 541 aa25.18■■□□□ 1.62
SDC1-205ENST00000447124 SMCR8Q8TEV9 937 aaPredicted RBP25.18■■□□□ 1.62
SDC1-205ENST00000447124 GINM1Q9NU53 330 aa25.18■■□□□ 1.62
SDC1-205ENST00000447124 ZBTB21Q9ULJ3 1066 aa25.18■■□□□ 1.62
SDC1-205ENST00000447124 MYPNQ86TC9 1320 aa25.17■■□□□ 1.62
SDC1-205ENST00000447124 MTMR2Q13614 643 aa25.17■■□□□ 1.62
SDC1-205ENST00000447124 RAET1EQ8TD07 263 aa25.17■■□□□ 1.62
SDC1-205ENST00000447124 HAUS7Q99871 368 aa25.17■■□□□ 1.62
SDC1-205ENST00000447124 LRRCC1Q9C099 1032 aa25.17■■□□□ 1.62
SDC1-205ENST00000447124 ASCC2Q9H1I8 757 aaPredicted RBP25.17■■□□□ 1.62
SDC1-205ENST00000447124 PAG1Q9NWQ8 432 aa25.17■■□□□ 1.62
SDC1-205ENST00000447124 SERPINB13Q9UIV8 391 aa25.17■■□□□ 1.62
SDC1-205ENST00000447124 ATAD5Q96QE3 1844 aa25.16■■□□□ 1.62
SDC1-205ENST00000447124 CHGBP05060 677 aa25.16■■□□□ 1.62
SDC1-205ENST00000447124 EVX2Q03828 476 aa25.16■■□□□ 1.62
SDC1-205ENST00000447124 MTFR1Q15390 333 aa25.16■■□□□ 1.62
SDC1-205ENST00000447124 TTC6Q86TZ1 520 aa25.16■■□□□ 1.62
SDC1-205ENST00000447124 EHD4Q9H223 541 aa25.16■■□□□ 1.62
SDC1-205ENST00000447124 DCTPP1Q9H773 170 aa25.16■■□□□ 1.62
SDC1-205ENST00000447124 PNMA3Q9UL41 463 aa25.16■■□□□ 1.62
SDC1-205ENST00000447124 MKI67P46013 3256 aaKnown RBP25.15■■□□□ 1.62
SDC1-205ENST00000447124 GH2P01242 217 aa25.15■■□□□ 1.62
SDC1-205ENST00000447124 GRK4P32298 578 aa25.15■■□□□ 1.62
SDC1-205ENST00000447124 LCORLQ8N3X6 602 aa25.15■■□□□ 1.62
SDC1-205ENST00000447124 MYH1P12882 1939 aa25.15■■□□□ 1.62
SDC1-205ENST00000447124 BRCA2P51587 3418 aa25.14■■□□□ 1.62
SDC1-205ENST00000447124 C19orf81C9J6K1 198 aa25.14■■□□□ 1.62
SDC1-205ENST00000447124 USP17L10C9JJH3 530 aa25.14■■□□□ 1.62
SDC1-205ENST00000447124 ADD2P35612 726 aa25.14■■□□□ 1.62
SDC1-205ENST00000447124 P2RX7Q99572 595 aaKnown RBP25.14■■□□□ 1.62
SDC1-205ENST00000447124 EMILIN3Q9NT22 766 aa25.14■■□□□ 1.62
SDC1-205ENST00000447124 DOCK3Q8IZD9 2030 aa25.13■■□□□ 1.61
SDC1-205ENST00000447124 HOXA7P31268 230 aaPredicted RBP25.13■■□□□ 1.61
SDC1-205ENST00000447124 SHMT1P34896 483 aa25.13■■□□□ 1.61
SDC1-205ENST00000447124 FLT3LGP49771 235 aa25.13■■□□□ 1.61
SDC1-205ENST00000447124 PABPC4Q13310 644 aaKnown RBP eCLIP25.13■■□□□ 1.61
SDC1-205ENST00000447124 FAM110CQ1W6H9 321 aa25.13■■□□□ 1.61
SDC1-205ENST00000447124 SDR42E1Q8WUS8 393 aa25.13■■□□□ 1.61
SDC1-205ENST00000447124 CRNKL1Q9BZJ0 848 aaKnown RBP25.13■■□□□ 1.61
SDC1-205ENST00000447124 ARMT1Q9H993 441 aa25.13■■□□□ 1.61
SDC1-205ENST00000447124 TMOD4Q9NZQ9 345 aa25.13■■□□□ 1.61
SDC1-205ENST00000447124 PRKAB2O43741 272 aa25.12■■□□□ 1.61
SDC1-205ENST00000447124 POLR3DP05423 398 aaPredicted RBP25.12■■□□□ 1.61
SDC1-205ENST00000447124 GCLCP48506 637 aaPredicted RBP25.12■■□□□ 1.61
SDC1-205ENST00000447124 GABPAQ06546 454 aa25.12■■□□□ 1.61
SDC1-205ENST00000447124 CERKLQ49MI3 558 aaPredicted RBP25.12■■□□□ 1.61
SDC1-205ENST00000447124 DCP1AQ9NPI6 582 aaPredicted RBP25.12■■□□□ 1.61
SDC1-205ENST00000447124 PCDHB15Q9Y5E8 787 aa25.12■■□□□ 1.61
SDC1-205ENST00000447124 LOC285556D6RIA3 1793 aa25.11■■□□□ 1.61
SDC1-205ENST00000447124 TNPO2O14787 897 aaKnown RBP25.11■■□□□ 1.61
SDC1-205ENST00000447124 PEX10O60683 326 aa25.11■■□□□ 1.61
SDC1-205ENST00000447124 CYP2D6P10635 497 aa25.11■■□□□ 1.61
SDC1-205ENST00000447124 GUCY1A2P33402 732 aa25.11■■□□□ 1.61
SDC1-205ENST00000447124 MCM9Q9NXL9 1143 aa25.11■■□□□ 1.61
SDC1-205ENST00000447124 MGAMO43451 1857 aa25.11■■□□□ 1.61
SDC1-205ENST00000447124 RBBP6Q7Z6E9 1792 aaKnown RBP25.1■■□□□ 1.61
SDC1-205ENST00000447124 PRPF38BQ5VTL8 546 aaKnown RBP25.1■■□□□ 1.61
SDC1-205ENST00000447124 POTEEQ6S8J3 1075 aa25.1■■□□□ 1.61
SDC1-205ENST00000447124 ADCY3O60266 1144 aa25.09■■□□□ 1.61
SDC1-205ENST00000447124 ABCB5Q2M3G0 1257 aa25.09■■□□□ 1.61
SDC1-205ENST00000447124 USP17L2Q6R6M4 530 aa25.09■■□□□ 1.61
SDC1-205ENST00000447124 ACER1Q8TDN7 264 aa25.09■■□□□ 1.61
SDC1-205ENST00000447124 SMIM22K7EJ46 135 aa25.08■■□□□ 1.61
SDC1-205ENST00000447124 MBD4O95243 580 aa25.08■■□□□ 1.61
SDC1-205ENST00000447124 IRF5Q13568 498 aa25.08■■□□□ 1.61
SDC1-205ENST00000447124 RAB3GAP1Q15042 981 aa25.08■■□□□ 1.61
SDC1-205ENST00000447124 UBE3CQ15386 1083 aa25.08■■□□□ 1.61
SDC1-205ENST00000447124 TXNRD2Q9NNW7 524 aa25.08■■□□□ 1.61
SDC1-205ENST00000447124 ECHDC1Q9NTX5 307 aa25.08■■□□□ 1.61
SDC1-205ENST00000447124 MORF4L1Q9UBU8 362 aa25.08■■□□□ 1.61
SDC1-205ENST00000447124 ELNP15502 786 aa25.07■■□□□ 1.6
SDC1-205ENST00000447124 IRX3P78415 501 aaPredicted RBP25.07■■□□□ 1.6
SDC1-205ENST00000447124 SLAIN1Q8ND83 568 aa25.07■■□□□ 1.6
SDC1-205ENST00000447124 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.07■■□□□ 1.6
SDC1-205ENST00000447124 RBPJLQ9UBG7 517 aa25.07■■□□□ 1.6
SDC1-205ENST00000447124 BIN2Q9UBW5 565 aaPredicted RBP25.07■■□□□ 1.6
SDC1-205ENST00000447124 GJD2Q9UKL4 321 aa25.07■■□□□ 1.6
SDC1-205ENST00000447124 CCL5P13501 91 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 HERVK_113P62684 666 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 ZYXQ15942 572 aaKnown RBP25.06■■□□□ 1.6
SDC1-205ENST00000447124 Q3C1V9 767 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 SLC44A5Q8NCS7 719 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 PXYLP1Q8TE99 480 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 COA7Q96BR5 231 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 SHISA4Q96DD7 197 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 DYNLL2Q96FJ2 89 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 C12orf42Q96LP6 360 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 CABP5Q9NP86 173 aa25.06■■□□□ 1.6
SDC1-205ENST00000447124 RRP1P56182 461 aaKnown RBP25.05■■□□□ 1.6
SDC1-205ENST00000447124 SEPT2Q15019 361 aa25.05■■□□□ 1.6
SDC1-205ENST00000447124 TSHZ3Q63HK5 1081 aa25.05■■□□□ 1.6
SDC1-205ENST00000447124 PUS7LQ9H0K6 701 aaKnown RBP25.05■■□□□ 1.6
SDC1-205ENST00000447124 RNF208Q9H0X6 261 aa25.05■■□□□ 1.6
SDC1-205ENST00000447124 UNC93B1Q9H1C4 597 aa25.05■■□□□ 1.6
SDC1-205ENST00000447124 GJB1P08034 283 aa25.04■■□□□ 1.6
SDC1-205ENST00000447124 UBXN2AP68543 259 aa25.04■■□□□ 1.6
SDC1-205ENST00000447124 KIAA1683Q9H0B3 1180 aa25.04■■□□□ 1.6
SDC1-205ENST00000447124 ATP8A2Q9NTI2 1148 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms