RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SHC4Q6S5L8 630 aa19.39■□□□□ 0.69
LAPTM4B-201ENST00000445593 CCDC186Q7Z3E2 898 aa19.39■□□□□ 0.69
LAPTM4B-201ENST00000445593 XDHP47989 1333 aa19.39■□□□□ 0.69
LAPTM4B-201ENST00000445593 CCDC196A0A1B0GTZ2 297 aa19.39■□□□□ 0.69
LAPTM4B-201ENST00000445593 DEXIO95424 95 aa19.39■□□□□ 0.69
LAPTM4B-201ENST00000445593 SLC3A2P08195 630 aaKnown RBP19.39■□□□□ 0.69
LAPTM4B-201ENST00000445593 VEGFAP15692 232 aaPredicted RBP19.39■□□□□ 0.69
LAPTM4B-201ENST00000445593 KRT27Q7Z3Y8 459 aa19.39■□□□□ 0.69
LAPTM4B-201ENST00000445593 SHISA4Q96DD7 197 aa19.39■□□□□ 0.69
LAPTM4B-201ENST00000445593 UTRNP46939 3433 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 RASGRP2Q7LDG7 609 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 TMTC2Q8N394 836 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 ZNF219Q9P2Y4 722 aaPredicted RBP19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 PYCARDQ9ULZ3 195 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 USP17L3A6NCW0 530 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 USP17L4A6NCW7 530 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 SEMA3EO15041 775 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 PNOCQ13519 176 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 USP17L1Q7RTZ2 530 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 CTAGE5O15320 804 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 TOB1P50616 345 aaPredicted RBP19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 EARS2Q5JPH6 523 aaKnown RBP19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 ZNF804AQ7Z570 1209 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 WASF1Q92558 559 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 KCNF1Q9H3M0 494 aa19.38■□□□□ 0.69
LAPTM4B-201ENST00000445593 FOXN1O15353 648 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 TFAP4Q01664 338 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 PTPAQ15257 358 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 HSP90AA4PQ58FG1 418 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 MKNK2Q9HBH9 465 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 CASZ1Q86V15 1759 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 A0A1W2PQ27 194 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 A0A1W2PQ64 194 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 A0A1W2PQD8 194 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 U2AF2P26368 475 aaKnown RBP eCLIP19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 MAP3K14Q99558 947 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 ANO10Q9NW15 660 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 ANAPC4Q9UJX5 808 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 STX8Q9UNK0 236 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 MYH15Q9Y2K3 1946 aa19.37■□□□□ 0.69
LAPTM4B-201ENST00000445593 IQCB1Q15051 598 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 FILIP1Q7Z7B0 1213 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 CEP57L1Q8IYX8 460 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 KIAA1468Q9P260 1216 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 ZNF75DP51815 510 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 CPVLQ9H3G5 476 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 CLIP2Q9UDT6 1046 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 GGA1Q9UJY5 639 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 PLCD1P51178 756 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 TROAPQ12815 778 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 ARID5BQ14865 1188 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 GRAMD1CQ8IYS0 662 aa19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 TDRD7Q8NHU6 1098 aaKnown RBP19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 CTCFLQ8NI51 663 aaPredicted RBP19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 NOL10Q9BSC4 688 aaKnown RBP19.36■□□□□ 0.69
LAPTM4B-201ENST00000445593 ZNF500O60304 480 aaPredicted RBP19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 CMA1P23946 247 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 PDE4BQ07343 736 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 PTPN21Q16825 1174 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 TXNRD1Q16881 649 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 MFSD14BQ5SR56 506 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 USP49Q70CQ1 688 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 MXD3Q9BW11 206 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 CD209Q9NNX6 404 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 POLLQ9UGP5 575 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 OFD1O75665 1012 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 SPTY2D1Q68D10 685 aaPredicted RBP19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 PROM2Q8N271 834 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 JMYQ8N9B5 988 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 WDR66Q8TBY9 1149 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 LEMD3Q9Y2U8 911 aa19.35■□□□□ 0.69
LAPTM4B-201ENST00000445593 WNT7AO00755 349 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 BTDP43251 543 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 LONRF3Q496Y0 759 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 SRBD1Q8N5C6 995 aaKnown RBP19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 NHSQ6T4R5 1651 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 STK36Q9NRP7 1315 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 PICALMQ13492 652 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 PKN1Q16512 942 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 DHX40Q8IX18 779 aaKnown RBP19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 GPKOWQ92917 476 aaPredicted RBP eCLIP19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 ATP8A2Q9NTI2 1148 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 THSD7AQ9UPZ6 1657 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 ADAMTS3O15072 1205 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 GOLGA8HP0CJ92 632 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 GTF2IP78347 998 aa19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.34■□□□□ 0.69
LAPTM4B-201ENST00000445593 CCDC144BQ3MJ40 725 aa19.33■□□□□ 0.69
LAPTM4B-201ENST00000445593 CNNM3Q8NE01 707 aa19.33■□□□□ 0.69
LAPTM4B-201ENST00000445593 RBM17Q96I25 401 aaKnown RBP19.33■□□□□ 0.69
LAPTM4B-201ENST00000445593 FAM13BQ9NYF5 915 aa19.33■□□□□ 0.69
LAPTM4B-201ENST00000445593 ARPP21Q9UBL0 812 aaPredicted RBP19.33■□□□□ 0.69
LAPTM4B-201ENST00000445593 ZNF174Q15697 407 aa19.33■□□□□ 0.68
LAPTM4B-201ENST00000445593 STAG2Q8N3U4 1231 aa19.33■□□□□ 0.68
LAPTM4B-201ENST00000445593 KCNH3Q9ULD8 1083 aa19.33■□□□□ 0.68
LAPTM4B-201ENST00000445593 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.33■□□□□ 0.68
LAPTM4B-201ENST00000445593 GOLGA6L6A8MZA4 724 aa19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 DOK7Q18PE1 504 aa19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 KRI1Q8N9T8 703 aaKnown RBP19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 IRS2Q9Y4H2 1338 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms