RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 TTF2Q9UNY4 1162 aaKnown RBP11.31□□□□□ -0.6
LINC00642-203ENST00000444942 NOP58Q9Y2X3 529 aaKnown RBP11.31□□□□□ -0.6
LINC00642-203ENST00000444942 FPGT-TNNI3KV9GXZ4 949 aa11.31□□□□□ -0.6
LINC00642-203ENST00000444942 CHD9Q3L8U1 2897 aa11.31□□□□□ -0.6
LINC00642-203ENST00000444942 MYH2Q9UKX2 1941 aa11.31□□□□□ -0.6
LINC00642-203ENST00000444942 TTC39AQ5SRH9 613 aa11.3□□□□□ -0.6
LINC00642-203ENST00000444942 MAP3K21Q5TCX8 1036 aa11.3□□□□□ -0.6
LINC00642-203ENST00000444942 ZNF576Q9H609 170 aa11.3□□□□□ -0.6
LINC00642-203ENST00000444942 TLR7Q9NYK1 1049 aaKnown RBP11.3□□□□□ -0.6
LINC00642-203ENST00000444942 SERPINA10Q9UK55 444 aa11.3□□□□□ -0.6
LINC00642-203ENST00000444942 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
LINC00642-203ENST00000444942 PLXNA1Q9UIW2 1896 aa11.3□□□□□ -0.6
LINC00642-203ENST00000444942 SPTBN4Q9H254 2564 aa11.29□□□□□ -0.6
LINC00642-203ENST00000444942 SMARCA5O60264 1052 aaPredicted RBP11.29□□□□□ -0.6
LINC00642-203ENST00000444942 DNAJB2P25686 324 aa11.29□□□□□ -0.6
LINC00642-203ENST00000444942 INPP5BP32019 993 aa11.29□□□□□ -0.6
LINC00642-203ENST00000444942 PI16Q6UXB8 463 aa11.29□□□□□ -0.6
LINC00642-203ENST00000444942 AACSQ86V21 672 aa11.29□□□□□ -0.6
LINC00642-203ENST00000444942 RHPN1Q8TCX5 695 aa11.29□□□□□ -0.6
LINC00642-203ENST00000444942 EAF2Q96CJ1 260 aaPredicted RBP11.29□□□□□ -0.6
LINC00642-203ENST00000444942 HOOK2Q96ED9 719 aa11.29□□□□□ -0.6
LINC00642-203ENST00000444942 SNRKQ9NRH2 765 aa11.29□□□□□ -0.6
LINC00642-203ENST00000444942 CXXC1Q9P0U4 656 aaPredicted RBP11.29□□□□□ -0.6
LINC00642-203ENST00000444942 WDFY4Q6ZS81 3184 aa11.29□□□□□ -0.6
LINC00642-203ENST00000444942 PRKAR2AP13861 404 aaKnown RBP11.28□□□□□ -0.6
LINC00642-203ENST00000444942 FOXK2Q01167 660 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 NHLH1Q02575 133 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 RASGRF1Q13972 1273 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 HSP90AB4PQ58FF6 505 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 LHX8Q68G74 356 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 ERC1Q8IUD2 1116 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 TRIB2Q92519 343 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 ZNF341Q9BYN7 854 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 GJD2Q9UKL4 321 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 DENND2AQ9ULE3 1009 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 SLC45A1Q9Y2W3 748 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 FAM86C2PA6NEL3 165 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 SMIM22K7EJ46 135 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 CXCL11O14625 94 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 PRDX5P30044 214 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 CRKP46108 304 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 CCDC85BQ15834 202 aaPredicted RBP11.28□□□□□ -0.6
LINC00642-203ENST00000444942 CCDC158Q5M9N0 1113 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 TBC1D9Q6ZT07 1266 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 WDR66Q8TBY9 1149 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 BADQ92934 168 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 KIF1BPQ96EK5 621 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 SENP6Q9GZR1 1112 aaPredicted RBP11.28□□□□□ -0.6
LINC00642-203ENST00000444942 DBNLQ9UJU6 430 aaKnown RBP11.28□□□□□ -0.6
LINC00642-203ENST00000444942 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
LINC00642-203ENST00000444942 LRRC37A2A6NM11 1700 aa11.27□□□□□ -0.61
LINC00642-203ENST00000444942 LDHBP07195 334 aaKnown RBP11.27□□□□□ -0.61
LINC00642-203ENST00000444942 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.61
LINC00642-203ENST00000444942 MCAMP43121 646 aa11.27□□□□□ -0.61
LINC00642-203ENST00000444942 FASTKD5Q7L8L6 764 aaKnown RBP11.27□□□□□ -0.61
LINC00642-203ENST00000444942 SMCR8Q8TEV9 937 aaPredicted RBP11.27□□□□□ -0.61
LINC00642-203ENST00000444942 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.61
LINC00642-203ENST00000444942 GPR108Q9NPR9 543 aa11.27□□□□□ -0.61
LINC00642-203ENST00000444942 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
LINC00642-203ENST00000444942 USP34Q70CQ2 3546 aa11.27□□□□□ -0.61
LINC00642-203ENST00000444942 PHIPQ8WWQ0 1821 aa11.27□□□□□ -0.61
LINC00642-203ENST00000444942 CFAP54Q96N23 3096 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
LINC00642-203ENST00000444942 RAB11FIP3O75154 756 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 ATN1P54259 1190 aaPredicted RBP11.26□□□□□ -0.61
LINC00642-203ENST00000444942 RTP1P59025 263 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 DIXDC1Q155Q3 683 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 FAM110CQ1W6H9 321 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
LINC00642-203ENST00000444942 FAM83AQ86UY5 434 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 CLASRPQ8N2M8 674 aaKnown RBP11.26□□□□□ -0.61
LINC00642-203ENST00000444942 ANKRD13CQ8N6S4 541 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 TIFAQ96CG3 184 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
LINC00642-203ENST00000444942 PRDM12Q9H4Q4 367 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 ZNF112Q9UJU3 913 aa11.26□□□□□ -0.61
LINC00642-203ENST00000444942 RPAP1Q9BWH6 1393 aaPredicted RBP11.26□□□□□ -0.61
LINC00642-203ENST00000444942 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.25□□□□□ -0.61
LINC00642-203ENST00000444942 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.25□□□□□ -0.61
LINC00642-203ENST00000444942 SEMA3EO15041 775 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 UQCRFS1P1P0C7P4 283 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 ARID4AP29374 1257 aaPredicted RBP11.25□□□□□ -0.61
LINC00642-203ENST00000444942 ZAP70P43403 619 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 KCNQ1P51787 676 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 CACNB3P54284 484 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 ADGRE1Q14246 886 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 AAK1Q2M2I8 961 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 NOL9Q5SY16 702 aaKnown RBP11.25□□□□□ -0.61
LINC00642-203ENST00000444942 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 MIGA2Q7L4E1 593 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 DZIP1Q86YF9 867 aaKnown RBP11.25□□□□□ -0.61
LINC00642-203ENST00000444942 KHSRPQ92945 711 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC00642-203ENST00000444942 TEKT1Q969V4 418 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 LRRCC1Q9C099 1032 aa11.25□□□□□ -0.61
LINC00642-203ENST00000444942 TFF2Q03403 129 aa11.24□□□□□ -0.61
LINC00642-203ENST00000444942 CACNB2Q08289 660 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms