RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 TDRD7Q8NHU6 1098 aaKnown RBP3.15□□□□□ -1.91
LIG4-203ENST00000442234 CXorf38Q8TB03 319 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 AFAP1L1Q8TED9 768 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 EZH1Q92800 747 aaPredicted RBP3.15□□□□□ -1.91
LIG4-203ENST00000442234 TSGA10Q9BZW7 698 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 LRRCC1Q9C099 1032 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 RANBP17Q9H2T7 1088 aaKnown RBP3.15□□□□□ -1.91
LIG4-203ENST00000442234 UNC45AQ9H3U1 944 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 FAN1Q9Y2M0 1017 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 NUB1Q9Y5A7 615 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 FAM169AQ9Y6X4 670 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 OVOS2A0A0G2JMS6 1433 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 OVOS2A0A0J9YW53 1432 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 OVOS2Q6IE36 1432 aa3.15□□□□□ -1.91
LIG4-203ENST00000442234 VCANP13611 3396 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 IPO5O00410 1097 aaKnown RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 PPP1R12BO60237 982 aaPredicted RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 KIF5CO60282 957 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CEP104O60308 925 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 SMIM24O75264 130 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ATP6V1G1O75348 118 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CD2BP2O95400 341 aaKnown RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 FMNL1O95466 1100 aaPredicted RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 MX1P20591 662 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 GJA8P48165 433 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 KCNB1Q14721 858 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 GNPTABQ3T906 1256 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 FILIP1LQ4L180 1135 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ZKSCAN2Q63HK3 967 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 MCM10Q7L590 875 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 KRT26Q7Z3Y9 468 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ITPRIPQ8IWB1 547 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CCDC146Q8IYE0 955 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CCDC82Q8N4S0 544 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ZGPATQ8N5A5 531 aaKnown RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 FAM200AQ8TCP9 573 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 KCNB2Q92953 911 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ZIC5Q96T25 663 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 EYA1Q99502 592 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 TSC22D3Q99576 134 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 LZTS2Q9BRK4 669 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CARD6Q9BX69 1037 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 MMADHCQ9H3L0 296 aaPredicted RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 C14orf93Q9H972 538 aaKnown RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 TMOD4Q9NZQ9 345 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ATP6V1DQ9Y5K8 247 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 PRDM15P57071 1507 aaPredicted RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 RANBP2P49792 3224 aaKnown RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 TRANK1O15050 2925 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ZFHX2Q9C0A1 2572 aaPredicted RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 GON4LQ3T8J9 2241 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 KDM5DQ9BY66 1539 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CARNS1A5YM72 827 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ANKRD33BA6NCL7 494 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 FAM205CA6NFA0 338 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 BUB1BO60566 1050 aaPredicted RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 IMPDH2P12268 514 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 DESP17661 470 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 XBP1P17861 261 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 LMNB1P20700 586 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 EPHX2P34913 555 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 DDIT3P35638 169 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 FOXD4Q12950 439 aaPredicted RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 SNCBQ16143 134 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 AOC3Q16853 763 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 WHAMMP3Q1A5X7 153 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CCDC178Q5BJE1 867 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 THEMIS2Q5TEJ8 643 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 DUSP27Q5VZP5 1158 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CLEC17AQ6ZS10 378 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 HDXQ7Z353 690 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 SULF1Q8IWU6 871 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 IFNL2Q8IZJ0 200 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 SYCP3Q8IZU3 236 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 VTI1AQ96AJ9 217 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 OSBPL9Q96SU4 736 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 TCHPQ9BT92 498 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 TMUB1Q9BVT8 246 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ZSWIM4Q9H7M6 989 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 LGR6Q9HBX8 967 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 HOOK1Q9UJC3 728 aaKnown RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 BLOC1S6Q9UL45 172 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 TNS3Q68CZ2 1445 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 RGPD3A6NKT7 1758 aaPredicted RBP3.14□□□□□ -1.91
LIG4-203ENST00000442234 RGPD4Q7Z3J3 1758 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CLRN2A0PK11 232 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 H7C1D1 291 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 PLSCR1O15162 318 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ZSCAN12O43309 604 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CREB3O43889 395 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 RGS20O76081 388 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 STARD3NLO95772 234 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 ARHGAP25P42331 645 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 PRELPP51888 382 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CCDC15Q0P6D6 951 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 HIC1Q14526 733 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 MAP7D1Q3KQU3 841 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 CCDC158Q5M9N0 1113 aa3.14□□□□□ -1.91
LIG4-203ENST00000442234 DMRTA1Q5VZB9 504 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms