RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CSF1RP07333 972 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 CTSWP56202 376 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 CORO7P57737 925 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 OTUD7BQ6GQQ9 843 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.57□□□□□ -0.24
LTBR-203ENST00000441074 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 ZBTB9Q96C00 473 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 HPSEQ9Y251 543 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 TJP1Q07157 1748 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 UTRNP46939 3433 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 GNPATO15228 680 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 IL15P40933 162 aaPredicted RBP13.56□□□□□ -0.24
LTBR-203ENST00000441074 SLC39A14Q15043 492 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 FOXR1Q6PIV2 292 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 PDILTQ8N807 584 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 CDC23Q9UJX2 597 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 FAN1Q9Y2M0 1017 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 MROH7-TTC4A0A0A0MT08 1334 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 GOLIM4O00461 696 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 WDHD1O75717 1129 aaPredicted RBP13.56□□□□□ -0.24
LTBR-203ENST00000441074 SPECC1LQ69YQ0 1117 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 PI16Q6UXB8 463 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
LTBR-203ENST00000441074 FAM237AA0A1B0GTK4 181 aa13.55□□□□□ -0.24
LTBR-203ENST00000441074 WTIPA6NIX2 430 aaPredicted RBP13.55□□□□□ -0.24
LTBR-203ENST00000441074 HSPD1P10809 573 aaKnown RBP13.55□□□□□ -0.24
LTBR-203ENST00000441074 HSP90AB3PQ58FF7 597 aa13.55□□□□□ -0.24
LTBR-203ENST00000441074 ABCB6Q9NP58 842 aa13.55□□□□□ -0.24
LTBR-203ENST00000441074 RNF113AO15541 343 aaKnown RBP13.55□□□□□ -0.24
LTBR-203ENST00000441074 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
LTBR-203ENST00000441074 KARSQ15046 597 aaKnown RBP13.55□□□□□ -0.24
LTBR-203ENST00000441074 PTPN21Q16825 1174 aa13.55□□□□□ -0.24
LTBR-203ENST00000441074 LRRC31Q6UY01 552 aa13.55□□□□□ -0.24
LTBR-203ENST00000441074 PNKPQ96T60 521 aa13.55□□□□□ -0.24
LTBR-203ENST00000441074 GBP3Q9H0R5 595 aa13.55□□□□□ -0.24
LTBR-203ENST00000441074 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
LTBR-203ENST00000441074 MYH14Q7Z406 1995 aaKnown RBP13.54□□□□□ -0.24
LTBR-203ENST00000441074 MAST3O60307 1309 aa13.54□□□□□ -0.24
LTBR-203ENST00000441074 TUBBP07437 444 aa13.54□□□□□ -0.24
LTBR-203ENST00000441074 CCDC175P0C221 793 aa13.54□□□□□ -0.24
LTBR-203ENST00000441074 ADKP55263 362 aaKnown RBP13.54□□□□□ -0.24
LTBR-203ENST00000441074 PNOCQ13519 176 aa13.54□□□□□ -0.24
LTBR-203ENST00000441074 HSP90B2PQ58FF3 399 aa13.54□□□□□ -0.24
LTBR-203ENST00000441074 TBC1D9BQ66K14 1250 aa13.54□□□□□ -0.24
LTBR-203ENST00000441074 MRPL44Q9H9J2 332 aaKnown RBP13.54□□□□□ -0.24
LTBR-203ENST00000441074 CEP126Q9P2H0 1117 aa13.54□□□□□ -0.24
LTBR-203ENST00000441074 AKAP2Q9Y2D5 859 aa13.54□□□□□ -0.24
LTBR-203ENST00000441074 SRCAPQ6ZRS2 3230 aa13.54□□□□□ -0.24
LTBR-203ENST00000441074 KIF28PB7ZC32 967 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 PPP6R2O75170 966 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 CIAO1O76071 339 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 CPP00450 1065 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 ATP2B1P20020 1258 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 KIF23Q02241 960 aaPredicted RBP13.53□□□□□ -0.24
LTBR-203ENST00000441074 SCARF1Q14162 830 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 SLC27A3Q5K4L6 730 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 NCAPGQ9BPX3 1015 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 DESI2Q9BSY9 194 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 CNNM1Q9NRU3 951 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 PUF60Q9UHX1 559 aaKnown RBP13.53□□□□□ -0.24
LTBR-203ENST00000441074 PDE8AO60658 829 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 MARCKSP29966 332 aaPredicted RBP13.53□□□□□ -0.24
LTBR-203ENST00000441074 CASP8Q14790 479 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 METTL24Q5JXM2 366 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 TEX2Q8IWB9 1127 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 ACBD3Q9H3P7 528 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 MED4Q9NPJ6 270 aa13.53□□□□□ -0.24
LTBR-203ENST00000441074 KIF5CO60282 957 aa13.52□□□□□ -0.24
LTBR-203ENST00000441074 NTSR2O95665 410 aa13.52□□□□□ -0.24
LTBR-203ENST00000441074 ZFYP08048 801 aaPredicted RBP13.52□□□□□ -0.24
LTBR-203ENST00000441074 IFIT1P09914 478 aaKnown RBP13.52□□□□□ -0.24
LTBR-203ENST00000441074 ZNF18P17022 549 aa13.52□□□□□ -0.24
LTBR-203ENST00000441074 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.24
LTBR-203ENST00000441074 ERFEQ4G0M1 354 aa13.52□□□□□ -0.24
LTBR-203ENST00000441074 SHC4Q6S5L8 630 aa13.52□□□□□ -0.24
LTBR-203ENST00000441074 CHST3Q7LGC8 479 aa13.52□□□□□ -0.24
LTBR-203ENST00000441074 PANX2Q96RD6 677 aa13.52□□□□□ -0.24
LTBR-203ENST00000441074 MYCBPQ99417 103 aaPredicted RBP13.52□□□□□ -0.24
LTBR-203ENST00000441074 RIPOR2Q9Y4F9 1068 aa13.52□□□□□ -0.24
LTBR-203ENST00000441074 LY75O60449 1722 aa13.52□□□□□ -0.24
LTBR-203ENST00000441074 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 CDHR2Q9BYE9 1310 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 ANKRD18BA2A2Z9 1011 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 PPFIA4O75335 1185 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.25
LTBR-203ENST00000441074 PDE4BQ07343 736 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 RESP18Q5W5W9 173 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 SLC51AQ86UW1 340 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 METTL16Q86W50 562 aaKnown RBP13.52□□□□□ -0.25
LTBR-203ENST00000441074 SUGP1Q8IWZ8 645 aaKnown RBP13.52□□□□□ -0.25
LTBR-203ENST00000441074 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 ELOA2Q8IYF1 753 aaPredicted RBP13.52□□□□□ -0.25
LTBR-203ENST00000441074 CNNM3Q8NE01 707 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 XAGE2Q96GT9 111 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 IRX2Q9BZI1 471 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms