RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 SRPRBQ9Y5M8 271 aaKnown RBP9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 MROH7-TTC4A0A0A0MT08 1334 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 XDHP47989 1333 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 RXRAP19793 462 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 KCNJ6P48051 423 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 TOB1P50616 345 aaPredicted RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 GSDMDP57764 484 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 DYNLL1P63167 89 aaKnown RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 ZRSR1Q15695 479 aaKnown RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 CRY2Q49AN0 593 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 RRP12Q5JTH9 1297 aaKnown RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 IFIT1BQ5T764 474 aaKnown RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 TMTC3Q6ZXV5 915 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 PHF20Q9BVI0 1012 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 CLIP2Q9UDT6 1046 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 FBXO2Q9UK22 296 aaPredicted RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 BAZ2AQ9UIF9 1905 aaKnown RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 UBR3Q6ZT12 1888 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 MINDY4BA8MYZ0 360 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 PPFIA3O75145 1194 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 GUCY1A2P33402 732 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 TRAPPC10P48553 1259 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 AKAP17AQ02040 695 aaKnown RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 PDE4BQ07343 736 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 PKN1Q16512 942 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 SLC27A3Q5K4L6 730 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 KRBA2Q6ZNG9 492 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 CCDC186Q7Z3E2 898 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 TMC4Q7Z404 712 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 DGKHQ86XP1 1220 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 STK11IPQ8N1F8 1099 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 TRIML1Q8N9V2 468 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 MYRIPQ8NFW9 859 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 MYL10Q9BUA6 226 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 FAM13BQ9NYF5 915 aa9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 R3HCC1Q9Y3T6 440 aaKnown RBP9.44□□□□□ -0.9
SPIRE1-204ENST00000440472 KLRG2A4D1S0 409 aaPredicted RBP9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 BTBD18B2RXH4 712 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 USP17L12C9JPN9 530 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 USP17L21D6R901 530 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 LDHCP07864 332 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 PTGS1P23219 599 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 RFC4P35249 363 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 MDM2Q00987 491 aaPredicted RBP9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 NCAPHQ15003 741 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 BICDL1Q6ZP65 573 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 ZNF830Q96NB3 372 aaPredicted RBP9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 SH3GLB2Q9NR46 395 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 TOMM22Q9NS69 142 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 KCNH3Q9ULD8 1083 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 PYCARDQ9ULZ3 195 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 LRRC37AA6NMS7 1700 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 ATP2B4P23634 1241 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 HOXA10P31260 410 aaPredicted RBP9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 NFIXQ14938 502 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 PTF1AQ7RTS3 328 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 ZNF804AQ7Z570 1209 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 CCDC144CPQ8IYA2 1237 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 TNFRSF25Q93038 417 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 FERMT2Q96AC1 680 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 FAM163AQ96GL9 167 aaPredicted RBP9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 AATFQ9NY61 560 aaKnown RBP eCLIP9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 PODXL2Q9NZ53 605 aa9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 IQSEC3Q9UPP2 1182 aaPredicted RBP9.43□□□□□ -0.9
SPIRE1-204ENST00000440472 IL1R1P14778 569 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 KLRK1P26718 216 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 MARCKSP29966 332 aaPredicted RBP9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 KRT2P35908 639 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 SARSP49591 514 aaKnown RBP9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 GNAQP50148 359 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 DPCR1Q3MIW9 517 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 C12orf60Q5U649 245 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 DRC7Q8IY82 874 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 AOPEPQ8N6M6 819 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 SPC24Q8NBT2 197 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 SPATA20Q8TB22 786 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 CCDC34Q96HJ3 373 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 MAP7D2Q96T17 732 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 PYM1Q9BRP8 204 aaKnown RBP9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 ZKSCAN3Q9BRR0 538 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 BRMS1Q9HCU9 246 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 CNTNAP5Q8WYK1 1306 aa9.42□□□□□ -0.9
SPIRE1-204ENST00000440472 WTIPA6NIX2 430 aaPredicted RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 TRIM75PA6NK02 468 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 RRP9O43818 475 aaKnown RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 BBOX1O75936 387 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 BAG3O95817 575 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 LDHBP07195 334 aaKnown RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 KIF5BP33176 963 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 MTERF4Q7Z6M4 381 aaKnown RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 LRRC8AQ8IWT6 810 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 CNBD1Q8NA66 436 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 ANO8Q9HCE9 1232 aaPredicted RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 DACH1Q9UI36 760 aa9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 TRPC5Q9UL62 973 aaPredicted RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 DDX60LQ5H9U9 1706 aaKnown RBP9.41□□□□□ -0.9
SPIRE1-204ENST00000440472 CBFA2T2O43439 604 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms