RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 UBE3CQ15386 1083 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 SLC10A5Q5PT55 438 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 TTLL6Q8N841 843 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 SWAP70Q9UH65 585 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 SRP68Q9UHB9 627 aaKnown RBP5.17□□□□□ -1.58
SCN3A-204ENST00000440431 ZNF804BA4D1E1 1349 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 ECM29Q5VYK3 1845 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 KIF13BQ9NQT8 1826 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 PATL2C9JE40 543 aaKnown RBP5.17□□□□□ -1.58
SCN3A-204ENST00000440431 PPEF1O14829 653 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-204ENST00000440431 NEMFO60524 1076 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 DALRD3Q5D0E6 543 aaKnown RBP5.17□□□□□ -1.58
SCN3A-204ENST00000440431 MFSD14BQ5SR56 506 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 TTLL5Q6EMB2 1281 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 CCDC174Q6PII3 467 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 ARHGAP27Q6ZUM4 889 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 ZNF589Q86UQ0 364 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-204ENST00000440431 CCDC82Q8N4S0 544 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 FAM227BQ96M60 508 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 RUFY1Q96T51 708 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 A0A0D9SFI3 127 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 GPAA1O43292 621 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 DEXIO95424 95 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 KRT2P35908 639 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 NECTIN1Q15223 517 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 Q6ZUG5 572 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 ARHGEF1Q92888 912 aaKnown RBP5.17□□□□□ -1.58
SCN3A-204ENST00000440431 TTC14Q96N46 770 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 HAUS7Q99871 368 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 COA1Q9GZY4 146 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 DHX36Q9H2U1 1008 aaKnown RBP5.17□□□□□ -1.58
SCN3A-204ENST00000440431 SPC25Q9HBM1 224 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 SEC31BQ9NQW1 1179 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 TTF2Q9UNY4 1162 aaKnown RBP5.17□□□□□ -1.58
SCN3A-204ENST00000440431 CARMIL3Q8ND23 1372 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 MYH13Q9UKX3 1938 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 HSPA4P34932 840 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 UBE2HP62256 183 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 JAKMIP3Q5VZ66 844 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 HEATR3Q7Z4Q2 680 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 CKAP2LQ8IYA6 745 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 FSIP1Q8NA03 581 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 ZNF384Q8TF68 577 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 AKT1S1Q96B36 256 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 USP40Q9NVE5 1235 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 PIM2Q9P1W9 311 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 ANGEL1Q9UNK9 670 aaKnown RBP5.16□□□□□ -1.58
SCN3A-204ENST00000440431 GTF2IP78347 998 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 IRX3P78415 501 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-204ENST00000440431 GRAPQ13588 217 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 RILPL1Q5EBL4 403 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 GALNT17Q6IS24 598 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 POTEAQ6S8J7 498 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 KRT25Q7Z3Z0 450 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 SYCP3Q8IZU3 236 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 GRAPLQ8TC17 118 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-204ENST00000440431 TACC3Q9Y6A5 838 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 FOCADQ5VW36 1801 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 TIAM2Q8IVF5 1701 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 CYP2E1P05181 493 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-204ENST00000440431 ZSCAN22P10073 491 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-204ENST00000440431 USP14P54578 494 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 CCNA1P78396 465 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 ZNF827Q17R98 1081 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 ERFEQ4G0M1 354 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 RUFY3Q7L099 469 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 FERMT3Q86UX7 667 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 MIGA1Q8NAN2 632 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 CAGE1Q8TC20 777 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCN3A-204ENST00000440431 KRT13P13646 458 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 IDEP14735 1019 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 MMP14P50281 582 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 PLCD1P51178 756 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 CHRNDQ07001 517 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 SPA17Q15506 151 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 PI16Q6UXB8 463 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 HS2ST1Q7LGA3 356 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 ARMC9Q7Z3E5 817 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 CACNA2D4Q7Z3S7 1137 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 TAF4BQ92750 862 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 TMX3Q96JJ7 454 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 CTAGE1Q96RT6 745 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 SEC62Q99442 399 aaKnown RBP5.16□□□□□ -1.58
SCN3A-204ENST00000440431 FERMT1Q9BQL6 677 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 GPHNQ9NQX3 736 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-204ENST00000440431 EXOC1Q9NV70 894 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 USP25Q9UHP3 1055 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 PRDM4Q9UKN5 801 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 MAST2Q6P0Q8 1798 aa5.16□□□□□ -1.58
SCN3A-204ENST00000440431 BRCA1P38398 1863 aaKnown RBP5.15□□□□□ -1.58
SCN3A-204ENST00000440431 RFX7Q2KHR2 1363 aa5.15□□□□□ -1.58
SCN3A-204ENST00000440431 TCRBV5S4A2TA0A5A2 114 aa5.15□□□□□ -1.58
SCN3A-204ENST00000440431 USO1O60763 962 aaKnown RBP5.15□□□□□ -1.58
SCN3A-204ENST00000440431 SLC1A4P43007 532 aa5.15□□□□□ -1.58
SCN3A-204ENST00000440431 SF3B3Q15393 1217 aaKnown RBP5.15□□□□□ -1.58
SCN3A-204ENST00000440431 UVSSAQ2YD98 709 aa5.15□□□□□ -1.58
SCN3A-204ENST00000440431 ADCK5Q3MIX3 580 aa5.15□□□□□ -1.58
SCN3A-204ENST00000440431 CCDC40Q4G0X9 1142 aa5.15□□□□□ -1.58
SCN3A-204ENST00000440431 AKNAD1Q5T1N1 836 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms