RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 RAET1EQ8TD07 263 aa24.65■■□□□ 1.54
NCKIPSD-206ENST00000439518 DNAJC2Q99543 621 aaKnown RBP24.65■■□□□ 1.54
NCKIPSD-206ENST00000439518 MYH1P12882 1939 aa24.65■■□□□ 1.54
NCKIPSD-206ENST00000439518 TCRBV5S4A2TA0A5A2 114 aa24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 GRK4P32298 578 aa24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 PRKCZQ05513 592 aa24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 PABPC4Q13310 644 aaKnown RBP eCLIP24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 MTMR2Q13614 643 aa24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 PRPF38BQ5VTL8 546 aaKnown RBP24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 TATDN1Q6P1N9 297 aa24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 ANKRD13CQ8N6S4 541 aa24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 EDC3Q96F86 508 aaKnown RBP24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 BCL11AQ9H165 835 aa24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 ASCC2Q9H1I8 757 aaPredicted RBP24.64■■□□□ 1.54
NCKIPSD-206ENST00000439518 ZNF532Q9HCE3 1301 aa24.63■■□□□ 1.53
NCKIPSD-206ENST00000439518 MYCP01106 439 aaPredicted RBP24.63■■□□□ 1.53
NCKIPSD-206ENST00000439518 FAM110CQ1W6H9 321 aa24.63■■□□□ 1.53
NCKIPSD-206ENST00000439518 TTC6Q86TZ1 520 aa24.63■■□□□ 1.53
NCKIPSD-206ENST00000439518 SERPINB13Q9UIV8 391 aa24.63■■□□□ 1.53
NCKIPSD-206ENST00000439518 GABRQQ9UN88 632 aa24.63■■□□□ 1.53
NCKIPSD-206ENST00000439518 MGAMO43451 1857 aa24.63■■□□□ 1.53
NCKIPSD-206ENST00000439518 C19orf81C9J6K1 198 aa24.62■■□□□ 1.53
NCKIPSD-206ENST00000439518 GCLCP48506 637 aaPredicted RBP24.62■■□□□ 1.53
NCKIPSD-206ENST00000439518 LRRCC1Q9C099 1032 aa24.62■■□□□ 1.53
NCKIPSD-206ENST00000439518 BOLA2Q9H3K6 86 aa24.62■■□□□ 1.53
NCKIPSD-206ENST00000439518 PAG1Q9NWQ8 432 aa24.62■■□□□ 1.53
NCKIPSD-206ENST00000439518 USP17L10C9JJH3 530 aa24.61■■□□□ 1.53
NCKIPSD-206ENST00000439518 GH2P01242 217 aa24.61■■□□□ 1.53
NCKIPSD-206ENST00000439518 PLCD1P51178 756 aa24.61■■□□□ 1.53
NCKIPSD-206ENST00000439518 HAUS7Q99871 368 aa24.61■■□□□ 1.53
NCKIPSD-206ENST00000439518 CRNKL1Q9BZJ0 848 aaKnown RBP24.61■■□□□ 1.53
NCKIPSD-206ENST00000439518 TNPO2O14787 897 aaKnown RBP24.6■■□□□ 1.53
NCKIPSD-206ENST00000439518 HOXA7P31268 230 aaPredicted RBP24.6■■□□□ 1.53
NCKIPSD-206ENST00000439518 MTFR1Q15390 333 aa24.6■■□□□ 1.53
NCKIPSD-206ENST00000439518 TMOD4Q9NZQ9 345 aa24.6■■□□□ 1.53
NCKIPSD-206ENST00000439518 DDX60LQ5H9U9 1706 aaKnown RBP24.6■■□□□ 1.53
NCKIPSD-206ENST00000439518 SMARCA5O60264 1052 aaPredicted RBP24.59■■□□□ 1.53
NCKIPSD-206ENST00000439518 FLT3LGP49771 235 aa24.59■■□□□ 1.53
NCKIPSD-206ENST00000439518 SLAIN1Q8ND83 568 aa24.59■■□□□ 1.53
NCKIPSD-206ENST00000439518 SHMT1P34896 483 aa24.58■■□□□ 1.53
NCKIPSD-206ENST00000439518 ADD2P35612 726 aa24.58■■□□□ 1.53
NCKIPSD-206ENST00000439518 GABPAQ06546 454 aa24.58■■□□□ 1.53
NCKIPSD-206ENST00000439518 IRF5Q13568 498 aa24.58■■□□□ 1.53
NCKIPSD-206ENST00000439518 LCORLQ8N3X6 602 aa24.58■■□□□ 1.53
NCKIPSD-206ENST00000439518 EMILIN3Q9NT22 766 aa24.58■■□□□ 1.53
NCKIPSD-206ENST00000439518 IRX3P78415 501 aaPredicted RBP24.57■■□□□ 1.52
NCKIPSD-206ENST00000439518 SLFNL1Q499Z3 407 aa24.57■■□□□ 1.52
NCKIPSD-206ENST00000439518 CERKLQ49MI3 558 aaPredicted RBP24.57■■□□□ 1.52
NCKIPSD-206ENST00000439518 P2RX7Q99572 595 aaKnown RBP24.57■■□□□ 1.52
NCKIPSD-206ENST00000439518 DCTPP1Q9H773 170 aa24.57■■□□□ 1.52
NCKIPSD-206ENST00000439518 DCP1AQ9NPI6 582 aaPredicted RBP24.57■■□□□ 1.52
NCKIPSD-206ENST00000439518 MCM9Q9NXL9 1143 aa24.57■■□□□ 1.52
NCKIPSD-206ENST00000439518 MORF4L1Q9UBU8 362 aa24.57■■□□□ 1.52
NCKIPSD-206ENST00000439518 ADCY3O60266 1144 aa24.56■■□□□ 1.52
NCKIPSD-206ENST00000439518 POLR3DP05423 398 aaPredicted RBP24.56■■□□□ 1.52
NCKIPSD-206ENST00000439518 PXYLP1Q8TE99 480 aa24.56■■□□□ 1.52
NCKIPSD-206ENST00000439518 SDR42E1Q8WUS8 393 aa24.56■■□□□ 1.52
NCKIPSD-206ENST00000439518 COA7Q96BR5 231 aa24.56■■□□□ 1.52
NCKIPSD-206ENST00000439518 BIN2Q9UBW5 565 aaPredicted RBP24.56■■□□□ 1.52
NCKIPSD-206ENST00000439518 DOCK3Q8IZD9 2030 aa24.56■■□□□ 1.52
NCKIPSD-206ENST00000439518 CCL5P13501 91 aa24.55■■□□□ 1.52
NCKIPSD-206ENST00000439518 EVX2Q03828 476 aa24.55■■□□□ 1.52
NCKIPSD-206ENST00000439518 ABCB5Q2M3G0 1257 aa24.55■■□□□ 1.52
NCKIPSD-206ENST00000439518 USP17L2Q6R6M4 530 aa24.55■■□□□ 1.52
NCKIPSD-206ENST00000439518 C12orf42Q96LP6 360 aa24.55■■□□□ 1.52
NCKIPSD-206ENST00000439518 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.55■■□□□ 1.525e-6■■■■■ 34.6
NCKIPSD-206ENST00000439518 ARMT1Q9H993 441 aa24.55■■□□□ 1.52
NCKIPSD-206ENST00000439518 NAV1Q8NEY1 1877 aa24.54■■□□□ 1.52
NCKIPSD-206ENST00000439518 GJB1P08034 283 aa24.54■■□□□ 1.52
NCKIPSD-206ENST00000439518 ELNP15502 786 aa24.54■■□□□ 1.52
NCKIPSD-206ENST00000439518 HERVK_113P62684 666 aa24.54■■□□□ 1.52
NCKIPSD-206ENST00000439518 UBXN2AP68543 259 aa24.54■■□□□ 1.52
NCKIPSD-206ENST00000439518 SHISA4Q96DD7 197 aa24.54■■□□□ 1.52
NCKIPSD-206ENST00000439518 MBD4O95243 580 aa24.53■■□□□ 1.52
NCKIPSD-206ENST00000439518 CHGBP05060 677 aa24.53■■□□□ 1.52
NCKIPSD-206ENST00000439518 GUCY1A2P33402 732 aa24.53■■□□□ 1.52
NCKIPSD-206ENST00000439518 RAB3GAP1Q15042 981 aa24.53■■□□□ 1.52
NCKIPSD-206ENST00000439518 UBE3CQ15386 1083 aa24.53■■□□□ 1.52
NCKIPSD-206ENST00000439518 KIAA1683Q9H0B3 1180 aa24.53■■□□□ 1.52
NCKIPSD-206ENST00000439518 ECHDC1Q9NTX5 307 aa24.53■■□□□ 1.52
NCKIPSD-206ENST00000439518 PRKAB2O43741 272 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 CYP2D6P10635 497 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 ACER1Q8TDN7 264 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 RNF208Q9H0X6 261 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 TXNRD2Q9NNW7 524 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 CABP5Q9NP86 173 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 ATP8A2Q9NTI2 1148 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 RBPJLQ9UBG7 517 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 GJD2Q9UKL4 321 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 TAOK2Q9UL54 1235 aa24.52■■□□□ 1.52
NCKIPSD-206ENST00000439518 PEX10O60683 326 aa24.51■■□□□ 1.51
NCKIPSD-206ENST00000439518 GJA8P48165 433 aa24.51■■□□□ 1.51
NCKIPSD-206ENST00000439518 POTEEQ6S8J3 1075 aa24.51■■□□□ 1.51
NCKIPSD-206ENST00000439518 NKX2-3Q8TAU0 364 aa24.51■■□□□ 1.51
NCKIPSD-206ENST00000439518 FEZ1Q99689 392 aa24.51■■□□□ 1.51
NCKIPSD-206ENST00000439518 UNC93B1Q9H1C4 597 aa24.51■■□□□ 1.51
NCKIPSD-206ENST00000439518 INHAP05111 366 aa24.5■■□□□ 1.51
NCKIPSD-206ENST00000439518 ZYXQ15942 572 aaKnown RBP24.5■■□□□ 1.51
NCKIPSD-206ENST00000439518 ZSCAN25Q6NSZ9 544 aa24.5■■□□□ 1.51
NCKIPSD-206ENST00000439518 GPRC5AQ8NFJ5 357 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms