RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 DUX4L7P0CJ90 424 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 TTC19Q6DKK2 380 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 SCHIP1Q9P0W5 487 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 MYO1AQ9UBC5 1043 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 DUX4Q9UBX2 424 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 SPDYE3A6NKU9 549 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 RFX1P22670 979 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 MCM10Q7L590 875 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 ANKLE2Q86XL3 938 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 KRT12Q99456 494 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 MYD88Q99836 296 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 RIC8AQ9NPQ8 531 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 LMNB1P20700 586 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 RAP1GDS1P52306 607 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 ZNF449Q6P9G9 518 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 NEK2P51955 445 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 LRRC8CQ8TDW0 803 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 CUTAO60888 179 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 C20orf194Q5TEA3 1177 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 TEX13AQ9BXU3 409 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-209ENST00000437951 GIMAP4Q9NUV9 329 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 MCF2L2Q86YR7 1114 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 TMCO5AQ8N6Q1 288 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 AMFRQ9UKV5 643 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 HYOU1Q9Y4L1 999 aa12.74□□□□□ -0.37
PTCH1-209ENST00000437951 SESN3P58005 492 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 CCT6AP40227 531 aaKnown RBP12.73□□□□□ -0.37
PTCH1-209ENST00000437951 MAGEA9P43362 315 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.73□□□□□ -0.37
PTCH1-209ENST00000437951 TMCO4Q5TGY1 634 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 PALMDQ9NP74 551 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-209ENST00000437951 CDC25BP30305 580 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 TCP1P17987 556 aaKnown RBP12.73□□□□□ -0.37
PTCH1-209ENST00000437951 SMTNP53814 917 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 C8orf34Q49A92 452 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 MMS22LQ6ZRQ5 1243 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 TRIM15Q9C019 465 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 ATP5HO75947 161 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 DCAF17Q5H9S7 520 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-209ENST00000437951 NECAB1Q8N987 351 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 OLFM3Q96PB7 478 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 MIS12Q9H081 205 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-209ENST00000437951 PDE1AP54750 535 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 OCA2Q04671 838 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 TAF11Q15544 211 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 SFMBT2Q5VUG0 894 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 RSBN1LQ6PCB5 846 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-209ENST00000437951 TMTC3Q6ZXV5 915 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 GDAP1L1Q96MZ0 367 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 SERPINI1Q99574 410 aa12.73□□□□□ -0.37
PTCH1-209ENST00000437951 IFIH1Q9BYX4 1025 aaKnown RBP12.73□□□□□ -0.37
PTCH1-209ENST00000437951 A0A1B0GVL5 298 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 SERPINI2O75830 405 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 KRT5P13647 590 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 ATP6V1E1P36543 226 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 CEP19Q96LK0 163 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 AFG3L2Q9Y4W6 797 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 PFDN6O15212 129 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 NSMCE1Q8WV22 266 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 IRX1P78414 480 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-209ENST00000437951 CFAP70Q5T0N1 1121 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 NOP53Q9NZM5 478 aaKnown RBP12.72□□□□□ -0.37
PTCH1-209ENST00000437951 CABP1Q9NZU7 370 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 GOLGA8CPA6NN73 597 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 GARSP41250 739 aaKnown RBP12.72□□□□□ -0.37
PTCH1-209ENST00000437951 ICE2Q659A1 982 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 PALM2Q8IXS6 379 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 ASPHQ12797 758 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 CCDC138Q96M89 665 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 TMEM132EQ6IEE7 984 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 C16orf87Q6PH81 154 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
PTCH1-209ENST00000437951 TRIM6Q9C030 488 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-209ENST00000437951 SLC52A1Q9NWF4 448 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 NUB1Q9Y5A7 615 aa12.72□□□□□ -0.37
PTCH1-209ENST00000437951 PSDA5PKW4 1024 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-209ENST00000437951 TRAF5O00463 557 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 RAD51AP2Q09MP3 1159 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 MAP7D3Q8IWC1 876 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 AK9Q5TCS8 1911 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 CBX8Q9HC52 389 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 GRIN2BQ13224 1484 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 MMEL1Q495T6 779 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 KCNG1Q9UIX4 513 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 JPH2Q9BR39 696 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-209ENST00000437951 VPS37BQ9H9H4 285 aa12.71□□□□□ -0.37
PTCH1-209ENST00000437951 TTI1O43156 1089 aa12.71□□□□□ -0.38
PTCH1-209ENST00000437951 FAM8A1Q9UBU6 413 aa12.71□□□□□ -0.38
PTCH1-209ENST00000437951 RASGRF2O14827 1237 aa12.71□□□□□ -0.38
PTCH1-209ENST00000437951 LONP1P36776 959 aaKnown RBP12.71□□□□□ -0.38
PTCH1-209ENST00000437951 POLE2P56282 527 aa12.71□□□□□ -0.38
PTCH1-209ENST00000437951 EIF3DO15371 548 aaKnown RBP eCLIP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms