RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 USP2O75604 605 aaPredicted RBP8.81□□□□□ -1
TOP3B-208ENST00000437929 DDX58O95786 925 aaKnown RBP8.81□□□□□ -1
TOP3B-208ENST00000437929 KCNJ4P48050 445 aa8.81□□□□□ -1
TOP3B-208ENST00000437929 IREB2P48200 963 aaKnown RBP8.81□□□□□ -1
TOP3B-208ENST00000437929 NBPF20Q3BBV1 942 aa8.81□□□□□ -1
TOP3B-208ENST00000437929 C8orf58Q8NAV2 365 aa8.81□□□□□ -1
TOP3B-208ENST00000437929 PLPP7Q8NBV4 271 aa8.81□□□□□ -1
TOP3B-208ENST00000437929 SH3TC2Q8TF17 1288 aa8.81□□□□□ -1
TOP3B-208ENST00000437929 OPTNQ96CV9 577 aa8.81□□□□□ -1
TOP3B-208ENST00000437929 PRMT6Q96LA8 375 aaPredicted RBP8.81□□□□□ -1
TOP3B-208ENST00000437929 CD209Q9NNX6 404 aa8.81□□□□□ -1
TOP3B-208ENST00000437929 LEMD3Q9Y2U8 911 aa8.81□□□□□ -1
TOP3B-208ENST00000437929 KIAA0100Q14667 2235 aaKnown RBP8.81□□□□□ -1
TOP3B-208ENST00000437929 PI4KAP2A4QPH2 592 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 MYO1BO43795 1136 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 TAF5LO75529 589 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 ITGA6P23229 1130 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 MMP14P50281 582 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 RBM5P52756 815 aaKnown RBP eCLIP8.8□□□□□ -1
TOP3B-208ENST00000437929 CHRNDQ07001 517 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 RASA3Q14644 834 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 WDR43Q15061 677 aaKnown RBP eCLIP8.8□□□□□ -1
TOP3B-208ENST00000437929 TAF1CQ15572 869 aaPredicted RBP8.8□□□□□ -1
TOP3B-208ENST00000437929 SUPT20HL1Q3ZLR7 823 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 VASH1Q7L8A9 365 aaPredicted RBP8.8□□□□□ -1
TOP3B-208ENST00000437929 UBE3BQ7Z3V4 1068 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 NBPF11Q86T75 865 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 ANKRD13AQ8IZ07 590 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 PI4KAP1Q8N8J0 262 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 BRI3BPQ8WY22 251 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 EMID1Q96A84 441 aaPredicted RBP8.8□□□□□ -1
TOP3B-208ENST00000437929 MPHOSPH8Q99549 860 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 ARHGAP39Q9C0H5 1083 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 ANKRD2Q9GZV1 360 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 PPP2R3BQ9Y5P8 575 aa8.8□□□□□ -1
TOP3B-208ENST00000437929 CCL15-CCL14A0A0B4J2E2 113 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 NEURL1BA8MQ27 555 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 ZNF853P0CG23 659 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 CCL15Q16663 113 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 KSR2Q6VAB6 950 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 TRMT44Q8IYL2 757 aaKnown RBP8.79□□□□□ -1
TOP3B-208ENST00000437929 FAM43AQ8N2R8 423 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 TSPYL6Q8N831 410 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 CDV3Q9UKY7 258 aaKnown RBP8.79□□□□□ -1
TOP3B-208ENST00000437929 ADAMTS8Q9UP79 889 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 DOLKQ9UPQ8 538 aa8.79□□□□□ -1
TOP3B-208ENST00000437929 RANBP2P49792 3224 aaKnown RBP8.78□□□□□ -1
TOP3B-208ENST00000437929 DLL1O00548 723 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 NEXNQ0ZGT2 675 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 NCOA4Q13772 614 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 RALBP1Q15311 655 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 RNF20Q5VTR2 975 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 CCDC30Q5VVM6 783 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.78□□□□□ -1
TOP3B-208ENST00000437929 PHTF2Q8N3S3 785 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 DPF3Q92784 378 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 KCTD15Q96SI1 283 aaPredicted RBP8.78□□□□□ -1
TOP3B-208ENST00000437929 VRTNQ9H8Y1 702 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 ZFYVE28Q9HCC9 887 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 IFT57Q9NWB7 429 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 IRS2Q9Y4H2 1338 aa8.78□□□□□ -1
TOP3B-208ENST00000437929 COL6A3P12111 3177 aa8.77□□□□□ -1
TOP3B-208ENST00000437929 A0A1B0GUL6 1792 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 UNCXA6NJT0 531 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 TCP10L2B9ZVM9 353 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 H7C1W4 665 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 GNAI1P63096 354 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 VGLL4Q14135 290 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 MTFR1Q15390 333 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 TSGA10IPQ3SY00 556 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 G2E3Q7L622 706 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 SHISA4Q96DD7 197 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 PRKD2Q9BZL6 878 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 TDRD3Q9H7E2 651 aaKnown RBP8.77□□□□□ -1.01
TOP3B-208ENST00000437929 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
TOP3B-208ENST00000437929 MYBBP1AQ9BQG0 1328 aaKnown RBP8.77□□□□□ -1.01
TOP3B-208ENST00000437929 APAF1O14727 1248 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 PLIN1O60240 522 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 IL1R1P14778 569 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 GTF2A2P52657 109 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 CASP7P55210 303 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 FOXC1Q12948 553 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 KIF22Q14807 665 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 ARHGEF6Q15052 776 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 EML3Q32P44 896 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 ZNF697Q5TEC3 545 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 ZNF804AQ7Z570 1209 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 RETREG2Q8NC44 543 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 SLC17A8Q8NDX2 589 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 TEPSINQ96N21 525 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 TMEM39BQ9GZU3 492 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 ZNF70Q9UC06 446 aaPredicted RBP8.76□□□□□ -1.01
TOP3B-208ENST00000437929 CHMP3Q9Y3E7 222 aa8.76□□□□□ -1.01
TOP3B-208ENST00000437929 TRIOBPQ9H2D6 2365 aa8.75□□□□□ -1.01
TOP3B-208ENST00000437929 ANKRD18BA2A2Z9 1011 aa8.75□□□□□ -1.01
TOP3B-208ENST00000437929 BTBD19C9JJ37 291 aa8.75□□□□□ -1.01
TOP3B-208ENST00000437929 CSF1RP07333 972 aa8.75□□□□□ -1.01
TOP3B-208ENST00000437929 PDIA4P13667 645 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms