RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 PPARAQ07869 468 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 FAM102BQ5T8I3 360 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 FAM160B1Q5W0V3 765 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 PPM1EQ8WY54 764 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 ZFYVE28Q9HCC9 887 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 IBTKQ9P2D0 1353 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-203ENST00000434735 USP6P35125 1406 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 CHL1O00533 1208 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 USO1O60763 962 aaKnown RBP13.66□□□□□ -0.22
UBE3B-203ENST00000434735 CDC37L1Q7L3B6 337 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 PNMA8AQ86V59 439 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-203ENST00000434735 CRACR2AQ9BSW2 395 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 ANO10Q9NW15 660 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 RTEL1Q9NZ71 1219 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 IGSF1Q8N6C5 1336 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 CARMIL3Q8ND23 1372 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 ZCCHC11Q5TAX3 1644 aaKnown RBP13.66□□□□□ -0.22
UBE3B-203ENST00000434735 GABPAQ06546 454 aa13.66□□□□□ -0.22
UBE3B-203ENST00000434735 MKRN1Q9UHC7 482 aaKnown RBP13.66□□□□□ -0.22
UBE3B-203ENST00000434735 STX10O60499 249 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 MTFR1LQ9H019 292 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 GBP3Q9H0R5 595 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 CD2APQ9Y5K6 639 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 ERCC6L2Q5T890 1561 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 DAPK3O43293 454 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 YEATS4O95619 227 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 SYKP43405 635 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 NFX1Q12986 1120 aaKnown RBP13.65□□□□□ -0.22
UBE3B-203ENST00000434735 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 TMEM110-MUSTN1A8MSY1 372 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 FERP16591 822 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 IFFO1Q0D2I5 559 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 DIXDC1Q155Q3 683 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 ERBB4Q15303 1308 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 MYO3BQ8WXR4 1341 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 COL15A1P39059 1388 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 MYZAPP0CAP1 466 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 CCDC65Q8IXS2 484 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-203ENST00000434735 PNMA2Q9UL42 364 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 PZPP20742 1482 aa13.65□□□□□ -0.22
UBE3B-203ENST00000434735 VWA3AA6NCI4 1184 aa13.65□□□□□ -0.23
UBE3B-203ENST00000434735 KRT9P35527 623 aa13.65□□□□□ -0.23
UBE3B-203ENST00000434735 HSP90AA4PQ58FG1 418 aa13.65□□□□□ -0.23
UBE3B-203ENST00000434735 ILDR1Q86SU0 546 aaPredicted RBP13.65□□□□□ -0.23
UBE3B-203ENST00000434735 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.23
UBE3B-203ENST00000434735 NRBP2Q9NSY0 501 aa13.65□□□□□ -0.23
UBE3B-203ENST00000434735 PHKA1P46020 1223 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 NFIXQ14938 502 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 SKAP1Q86WV1 359 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 XKR9Q5GH70 373 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 SLC16A10Q8TF71 515 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 ELF1P32519 619 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 DHX32Q7L7V1 743 aaKnown RBP13.64□□□□□ -0.23
UBE3B-203ENST00000434735 PTPRMP28827 1452 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 KBTBD13C9JR72 458 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 CD19P15391 556 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 PAFAH1B1P43034 410 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 PRR16Q569H4 304 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 PUS3Q9BZE2 481 aaKnown RBP13.64□□□□□ -0.23
UBE3B-203ENST00000434735 PCDHA1Q9Y5I3 950 aa13.64□□□□□ -0.23
UBE3B-203ENST00000434735 PSMA7O14818 248 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 ARID4AP29374 1257 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-203ENST00000434735 PLCB3Q01970 1234 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 SV2BQ7L1I2 683 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 MYCT1Q8N699 235 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 PSTPIP2Q9H939 334 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 MAP3K4Q9Y6R4 1608 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 ZSCAN12O43309 604 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 NONOQ15233 471 aaKnown RBP eCLIP13.63□□□□□ -0.23
UBE3B-203ENST00000434735 PROSER3Q2NL68 480 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 CREB3L3Q68CJ9 461 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 KCTD1Q719H9 257 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 FAM49AQ9H0Q0 323 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-203ENST00000434735 PI4KBQ9UBF8 816 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 ZNF215Q9UL58 517 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-203ENST00000434735 RIMBP3CA6NJZ7 1639 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 RIMBP3BA6NNM3 1639 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 RIMBP3Q9UFD9 1639 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 ERVV-1B6SEH8 477 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
UBE3B-203ENST00000434735 SFPQP23246 707 aaKnown RBP eCLIP13.63□□□□□ -0.23
UBE3B-203ENST00000434735 POLGP54098 1239 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-203ENST00000434735 C1orf228Q6PIY5 440 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 KIF5CO60282 957 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 PDE8BO95263 885 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 CRKP46108 304 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 JAKMIP2Q96AA8 810 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 PIDD1Q9HB75 910 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
UBE3B-203ENST00000434735 N4BP3O15049 544 aa13.62□□□□□ -0.23
UBE3B-203ENST00000434735 CCDC17Q96LX7 622 aa13.62□□□□□ -0.23
UBE3B-203ENST00000434735 ESYT1Q9BSJ8 1104 aa13.62□□□□□ -0.23
UBE3B-203ENST00000434735 BRIP1Q9BX63 1249 aa13.62□□□□□ -0.23
UBE3B-203ENST00000434735 AXIN2Q9Y2T1 843 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms