RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 SAFBQ15424 915 aaKnown RBP eCLIP19.59■□□□□ 0.73
CTSD-204ENST00000433655 FBXO2Q9UK22 296 aaPredicted RBP19.59■□□□□ 0.73
CTSD-204ENST00000433655 PLEKHA8P1O95397 391 aa19.59■□□□□ 0.73
CTSD-204ENST00000433655 TROAPQ12815 778 aa19.59■□□□□ 0.73
CTSD-204ENST00000433655 ARID5BQ14865 1188 aa19.59■□□□□ 0.73
CTSD-204ENST00000433655 PPP2R5BQ15173 497 aa19.59■□□□□ 0.73
CTSD-204ENST00000433655 METTL16Q86W50 562 aaKnown RBP19.59■□□□□ 0.73
CTSD-204ENST00000433655 KRI1Q8N9T8 703 aaKnown RBP19.59■□□□□ 0.73
CTSD-204ENST00000433655 JAG2Q9Y219 1238 aa19.59■□□□□ 0.73
CTSD-204ENST00000433655 ORC4O43929 436 aa19.58■□□□□ 0.73
CTSD-204ENST00000433655 CYP2D6P10635 497 aa19.58■□□□□ 0.73
CTSD-204ENST00000433655 IFIT1BQ5T764 474 aaKnown RBP19.58■□□□□ 0.73
CTSD-204ENST00000433655 PCDHB6Q9Y5E3 794 aa19.58■□□□□ 0.73
CTSD-204ENST00000433655 PNOCQ13519 176 aa19.58■□□□□ 0.72
CTSD-204ENST00000433655 LONRF3Q496Y0 759 aa19.58■□□□□ 0.72
CTSD-204ENST00000433655 RILPL1Q5EBL4 403 aa19.58■□□□□ 0.72
CTSD-204ENST00000433655 MYRIPQ8NFW9 859 aa19.58■□□□□ 0.72
CTSD-204ENST00000433655 PRIMPOLQ96LW4 560 aa19.58■□□□□ 0.72
CTSD-204ENST00000433655 KCNH3Q9ULD8 1083 aa19.58■□□□□ 0.72
CTSD-204ENST00000433655 PTPREP23469 700 aa19.57■□□□□ 0.72
CTSD-204ENST00000433655 SPECC1Q5M775 1068 aa19.57■□□□□ 0.72
CTSD-204ENST00000433655 KRBA2Q6ZNG9 492 aa19.57■□□□□ 0.72
CTSD-204ENST00000433655 CRNKL1Q9BZJ0 848 aaKnown RBP19.57■□□□□ 0.72
CTSD-204ENST00000433655 HSD3B7Q9H2F3 369 aa19.57■□□□□ 0.72
CTSD-204ENST00000433655 ATP8A2Q9NTI2 1148 aa19.57■□□□□ 0.72
CTSD-204ENST00000433655 UBR3Q6ZT12 1888 aa19.57■□□□□ 0.72
CTSD-204ENST00000433655 FAM205CA6NFA0 338 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 PRPF3O43395 683 aaKnown RBP19.56■□□□□ 0.72
CTSD-204ENST00000433655 NMT2O60551 498 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 NFIXQ14938 502 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 ZRSR1Q15695 479 aaKnown RBP19.56■□□□□ 0.72
CTSD-204ENST00000433655 SBK1Q52WX2 424 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 CATIPQ7Z7H3 387 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 IQCA1Q86XH1 822 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 FOXP4Q8IVH2 680 aaPredicted RBP19.56■□□□□ 0.72
CTSD-204ENST00000433655 LRRC8AQ8IWT6 810 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 PHF20Q9BVI0 1012 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 VPS54Q9P1Q0 977 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 ISM2Q6H9L7 571 aa19.56■□□□□ 0.72
CTSD-204ENST00000433655 SPATA31A6Q5VVP1 1343 aa19.55■□□□□ 0.72
CTSD-204ENST00000433655 CNTNAP5Q8WYK1 1306 aa19.55■□□□□ 0.72
CTSD-204ENST00000433655 hCG_1642624A0A1W2PR95 340 aa19.55■□□□□ 0.72
CTSD-204ENST00000433655 DDAH1O94760 285 aa19.55■□□□□ 0.72
CTSD-204ENST00000433655 MDM2Q00987 491 aaPredicted RBP19.55■□□□□ 0.72
CTSD-204ENST00000433655 EARS2Q5JPH6 523 aaKnown RBP19.55■□□□□ 0.72
CTSD-204ENST00000433655 TMTC3Q6ZXV5 915 aa19.55■□□□□ 0.72
CTSD-204ENST00000433655 RBM28Q9NW13 759 aaKnown RBP19.55■□□□□ 0.72
CTSD-204ENST00000433655 DYNC1I1O14576 645 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 FOXN1O15353 648 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 RFC4P35249 363 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 GRAPQ13588 217 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 NPY5RQ15761 445 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 TRAPPC3LQ5T215 181 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 FAM196AQ6ZSG2 479 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 GRAPLQ8TC17 118 aaPredicted RBP19.54■□□□□ 0.72
CTSD-204ENST00000433655 ARPP21Q9UBL0 812 aaPredicted RBP19.54■□□□□ 0.72
CTSD-204ENST00000433655 NAV1Q8NEY1 1877 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 CDK5RAP2Q96SN8 1893 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 IKBKBO14920 756 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 CALM1P0DP23 149 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 CALM2P0DP24 149 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 CALM3P0DP25 149 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 FAM47AQ5JRC9 791 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 TMED8Q6PL24 325 aaPredicted RBP19.54■□□□□ 0.72
CTSD-204ENST00000433655 ELOA2Q8IYF1 753 aaPredicted RBP19.54■□□□□ 0.72
CTSD-204ENST00000433655 CABP5Q9NP86 173 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 LRRC4BQ9NT99 713 aa19.54■□□□□ 0.72
CTSD-204ENST00000433655 MKRN1Q9UHC7 482 aaKnown RBP19.54■□□□□ 0.72
CTSD-204ENST00000433655 V9GY48 417 aaPredicted RBP19.54■□□□□ 0.72
CTSD-204ENST00000433655 CCZ1BP86790 482 aa19.53■□□□□ 0.72
CTSD-204ENST00000433655 CCZ1P86791 482 aaPredicted RBP19.53■□□□□ 0.72
CTSD-204ENST00000433655 ZNF579Q8NAF0 562 aaKnown RBP19.53■□□□□ 0.72
CTSD-204ENST00000433655 TNFRSF25Q93038 417 aa19.53■□□□□ 0.72
CTSD-204ENST00000433655 XPO4Q9C0E2 1151 aaKnown RBP19.53■□□□□ 0.72
CTSD-204ENST00000433655 BMP6P22004 513 aa19.52■□□□□ 0.72
CTSD-204ENST00000433655 AKAP17AQ02040 695 aaKnown RBP19.52■□□□□ 0.72
CTSD-204ENST00000433655 GRIK5Q16478 980 aa19.52■□□□□ 0.72
CTSD-204ENST00000433655 SRBD1Q8N5C6 995 aaKnown RBP19.52■□□□□ 0.72
CTSD-204ENST00000433655 CNNM3Q8NE01 707 aa19.52■□□□□ 0.72
CTSD-204ENST00000433655 GJD4Q96KN9 370 aaPredicted RBP19.52■□□□□ 0.72
CTSD-204ENST00000433655 PCDHA5Q9Y5H7 936 aa19.52■□□□□ 0.72
CTSD-204ENST00000433655 SRPRBQ9Y5M8 271 aaKnown RBP19.52■□□□□ 0.72
CTSD-204ENST00000433655 MORC2Q9Y6X9 1032 aaPredicted RBP19.52■□□□□ 0.72
CTSD-204ENST00000433655 WNT7AO00755 349 aa19.52■□□□□ 0.72
CTSD-204ENST00000433655 USP17L8P0C7I0 530 aa19.52■□□□□ 0.72
CTSD-204ENST00000433655 GTF2F1P35269 517 aaKnown RBP eCLIP19.52■□□□□ 0.725e-6■■■■□ 24.4
CTSD-204ENST00000433655 RCSD1Q6JBY9 416 aa19.52■□□□□ 0.72
CTSD-204ENST00000433655 FILIP1Q7Z7B0 1213 aa19.52■□□□□ 0.72
CTSD-204ENST00000433655 DZIP1Q86YF9 867 aaKnown RBP19.52■□□□□ 0.72
CTSD-204ENST00000433655 OSBPL5Q9H0X9 879 aaPredicted RBP19.52■□□□□ 0.72
CTSD-204ENST00000433655 IFNKQ9P0W0 207 aa19.52■□□□□ 0.72
CTSD-204ENST00000433655 SMTNL1A8MU46 457 aa19.51■□□□□ 0.71
CTSD-204ENST00000433655 NEMFO60524 1076 aa19.51■□□□□ 0.71
CTSD-204ENST00000433655 KRT2P35908 639 aa19.51■□□□□ 0.71
CTSD-204ENST00000433655 CNBD1Q8NA66 436 aa19.51■□□□□ 0.71
CTSD-204ENST00000433655 LEMD3Q9Y2U8 911 aa19.51■□□□□ 0.71
CTSD-204ENST00000433655 NOM1Q5C9Z4 860 aaKnown RBP19.51■□□□□ 0.71
CTSD-204ENST00000433655 SPTY2D1Q68D10 685 aaPredicted RBP19.51■□□□□ 0.71
CTSD-204ENST00000433655 PRR5LQ6MZQ0 368 aa19.51■□□□□ 0.71
CTSD-204ENST00000433655 USP49Q70CQ1 688 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms