RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 HOOK1Q9UJC3 728 aaKnown RBP15.77■□□□□ 0.11
THBS3-202ENST00000428962 CCDC88AQ3V6T2 1871 aa15.77■□□□□ 0.11
THBS3-202ENST00000428962 BTBD18B2RXH4 712 aa15.76■□□□□ 0.11
THBS3-202ENST00000428962 ORC4O43929 436 aa15.76■□□□□ 0.11
THBS3-202ENST00000428962 APBA3O96018 575 aa15.76■□□□□ 0.11
THBS3-202ENST00000428962 GUCY1A2P33402 732 aa15.76■□□□□ 0.11
THBS3-202ENST00000428962 DPCR1Q3MIW9 517 aa15.76■□□□□ 0.11
THBS3-202ENST00000428962 CTR9Q6PD62 1173 aa15.76■□□□□ 0.11
THBS3-202ENST00000428962 SHC4Q6S5L8 630 aa15.76■□□□□ 0.11
THBS3-202ENST00000428962 PTF1AQ7RTS3 328 aa15.76■□□□□ 0.11
THBS3-202ENST00000428962 ELOA2Q8IYF1 753 aaPredicted RBP15.76■□□□□ 0.11
THBS3-202ENST00000428962 ENAHQ8N8S7 591 aaPredicted RBP15.76■□□□□ 0.11
THBS3-202ENST00000428962 ARHGEF1Q92888 912 aaKnown RBP15.76■□□□□ 0.11
THBS3-202ENST00000428962 BAZ2AQ9UIF9 1905 aaKnown RBP15.76■□□□□ 0.11
THBS3-202ENST00000428962 WTIPA6NIX2 430 aaPredicted RBP15.75■□□□□ 0.11
THBS3-202ENST00000428962 KLRK1P26718 216 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 RFC4P35249 363 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 CHAF1AQ13111 956 aaPredicted RBP15.75■□□□□ 0.11
THBS3-202ENST00000428962 ZNF384Q8TF68 577 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 ERCC4Q92889 916 aaPredicted RBP15.75■□□□□ 0.11
THBS3-202ENST00000428962 FAM13BQ9NYF5 915 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 TNRC6CQ9HCJ0 1690 aaKnown RBP15.75■□□□□ 0.11
THBS3-202ENST00000428962 UBE2Q2LH0YL09 131 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 DYNC1I1O14576 645 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 DHX8Q14562 1220 aaKnown RBP15.75■□□□□ 0.11
THBS3-202ENST00000428962 SBK1Q52WX2 424 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 DZIP1Q86YF9 867 aaKnown RBP15.75■□□□□ 0.11
THBS3-202ENST00000428962 C17orf53Q8N3J3 647 aaPredicted RBP15.75■□□□□ 0.11
THBS3-202ENST00000428962 TFCP2L1Q9NZI6 479 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 TUBE1Q9UJT0 475 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 KCNJ14Q9UNX9 436 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
THBS3-202ENST00000428962 MORC2Q9Y6X9 1032 aaPredicted RBP15.75■□□□□ 0.11
THBS3-202ENST00000428962 MYH6P13533 1939 aa15.75■□□□□ 0.11
THBS3-202ENST00000428962 USP17L12C9JPN9 530 aa15.74■□□□□ 0.11
THBS3-202ENST00000428962 USP17L21D6R901 530 aa15.74■□□□□ 0.11
THBS3-202ENST00000428962 IKBKBO14920 756 aa15.74■□□□□ 0.11
THBS3-202ENST00000428962 PRPF3O43395 683 aaKnown RBP15.74■□□□□ 0.11
THBS3-202ENST00000428962 TRAPPC3LQ5T215 181 aa15.74■□□□□ 0.11
THBS3-202ENST00000428962 SMIM5Q71RC9 77 aa15.74■□□□□ 0.11
THBS3-202ENST00000428962 FBXW7Q969H0 707 aa15.74■□□□□ 0.11
THBS3-202ENST00000428962 BRMS1Q9HCU9 246 aa15.74■□□□□ 0.11
THBS3-202ENST00000428962 DCP1AQ9NPI6 582 aaPredicted RBP15.74■□□□□ 0.11
THBS3-202ENST00000428962 AATFQ9NY61 560 aaKnown RBP eCLIP15.74■□□□□ 0.11
THBS3-202ENST00000428962 KCNH3Q9ULD8 1083 aa15.74■□□□□ 0.11
THBS3-202ENST00000428962 LEMD3Q9Y2U8 911 aa15.74■□□□□ 0.11
THBS3-202ENST00000428962 ADRA2BP18089 450 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 TM4SF1P30408 202 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 GSDMDP57764 484 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 PDE4BQ07343 736 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 GRAPQ13588 217 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 CCDC82Q8N4S0 544 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
THBS3-202ENST00000428962 CNNM3Q8NE01 707 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 WDR66Q8TBY9 1149 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 GRAPLQ8TC17 118 aaPredicted RBP15.73■□□□□ 0.11
THBS3-202ENST00000428962 CAMKK2Q96RR4 588 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 NRBP1Q9UHY1 535 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 MYH2Q9UKX2 1941 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 A0A087WWV3 80 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 CYP2D7A0A087X1C5 515 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 BMP15O95972 392 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 PTPREP23469 700 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 PRDX5P30044 214 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 KRT2P35908 639 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 GSTO1P78417 241 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 EZH2Q15910 746 aaKnown RBP15.73■□□□□ 0.11
THBS3-202ENST00000428962 KRBA2Q6ZNG9 492 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 MYRIPQ8NFW9 859 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 IMPACTQ9P2X3 320 aa15.73■□□□□ 0.11
THBS3-202ENST00000428962 IRS2Q9Y4H2 1338 aa15.72■□□□□ 0.11
THBS3-202ENST00000428962 BIN1O00499 593 aa15.72■□□□□ 0.11
THBS3-202ENST00000428962 MYO1BO43795 1136 aa15.72■□□□□ 0.11
THBS3-202ENST00000428962 RRP9O43818 475 aaKnown RBP15.72■□□□□ 0.11
THBS3-202ENST00000428962 TOB1P50616 345 aaPredicted RBP15.72■□□□□ 0.11
THBS3-202ENST00000428962 CMTR1Q8N1G2 835 aaKnown RBP15.72■□□□□ 0.11
THBS3-202ENST00000428962 CNBD1Q8NA66 436 aa15.72■□□□□ 0.11
THBS3-202ENST00000428962 CTCFLQ8NI51 663 aaPredicted RBP15.72■□□□□ 0.11
THBS3-202ENST00000428962 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
THBS3-202ENST00000428962 ANKIB1Q9P2G1 1089 aa15.72■□□□□ 0.11
THBS3-202ENST00000428962 FBXO2Q9UK22 296 aaPredicted RBP15.72■□□□□ 0.11
THBS3-202ENST00000428962 SBF2Q86WG5 1849 aa15.72■□□□□ 0.11
THBS3-202ENST00000428962 PRDM1O75626 825 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 FUT2Q10981 343 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 TROAPQ12815 778 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 LRMPQ12912 555 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 CCDC144BQ3MJ40 725 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 OLFM4Q6UX06 510 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 TMTC3Q6ZXV5 915 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 ZNF804AQ7Z570 1209 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 LRRC8AQ8IWT6 810 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 CCDC34Q96HJ3 373 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 PHF20Q9BVI0 1012 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 BCL11BQ9C0K0 894 aaPredicted RBP15.71■□□□□ 0.11
THBS3-202ENST00000428962 XDHP47989 1333 aa15.71■□□□□ 0.11
THBS3-202ENST00000428962 LDHBP07195 334 aaKnown RBP15.71■□□□□ 0.1
THBS3-202ENST00000428962 NR5A1Q13285 461 aa15.71■□□□□ 0.1
THBS3-202ENST00000428962 CERS3Q8IU89 383 aa15.71■□□□□ 0.1
THBS3-202ENST00000428962 AMOTL1Q8IY63 956 aa15.71■□□□□ 0.1
THBS3-202ENST00000428962 CCDC24Q8N4L8 307 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms