RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 FZD1Q9UP38 647 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 XRCC6P12956 609 aaKnown RBP eCLIP12.69□□□□□ -0.38
HIPK2-203ENST00000428878 NFIAQ12857 509 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 KLHL40Q2TBA0 621 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 CSRNP1Q96S65 589 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 ERCC3P19447 782 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 KIF5BP33176 963 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 MRE11P49959 708 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 FBXO33Q7Z6M2 555 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 FILIP1Q7Z7B0 1213 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 TMEM87BQ96K49 555 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 PFKFB2O60825 505 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 SMC2O95347 1197 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 ZNF76P36508 570 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 CLIC4Q9Y696 253 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 MED23Q9ULK4 1368 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 NUP88Q99567 741 aaPredicted RBP12.68□□□□□ -0.38
HIPK2-203ENST00000428878 TCEAL9Q9UHQ7 104 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 MRVI1Q9Y6F6 885 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
HIPK2-203ENST00000428878 KCPQ6ZWJ8 1503 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 SOCS7O14512 581 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 SORBS3O60504 671 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 UBE2HP62256 183 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 SP4Q02446 784 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 PLS1Q14651 629 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 LETM2Q2VYF4 491 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 TBC1D22AQ8WUA7 517 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 DNAJC25Q9H1X3 360 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 ATP6V0A2Q9Y487 856 aa12.68□□□□□ -0.38
HIPK2-203ENST00000428878 PNPLA7Q6ZV29 1317 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 VWA3AA6NCI4 1184 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 PLCG2P16885 1265 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 CRKP46108 304 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 CUL4AQ13619 759 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 SH2B2O14492 632 aaPredicted RBP12.67□□□□□ -0.38
HIPK2-203ENST00000428878 SPTLC2O15270 562 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 CFAP100Q494V2 611 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 LEO1Q8WVC0 666 aaPredicted RBP12.67□□□□□ -0.38
HIPK2-203ENST00000428878 WASF1Q92558 559 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 PLCH1Q4KWH8 1693 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 SHANK3Q9BYB0 1731 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 COBLO75128 1261 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 PARP1P09874 1014 aaKnown RBP12.67□□□□□ -0.38
HIPK2-203ENST00000428878 DALRD3Q5D0E6 543 aaKnown RBP12.67□□□□□ -0.38
HIPK2-203ENST00000428878 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 MB21D2Q8IYB1 491 aaPredicted RBP12.67□□□□□ -0.38
HIPK2-203ENST00000428878 ENAHQ8N8S7 591 aaPredicted RBP12.67□□□□□ -0.38
HIPK2-203ENST00000428878 DHX58Q96C10 678 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 EEF2KMTQ96G04 330 aa12.67□□□□□ -0.38
HIPK2-203ENST00000428878 RIC1Q4ADV7 1423 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 CCDC192P0DO97 292 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
HIPK2-203ENST00000428878 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
HIPK2-203ENST00000428878 STAG2Q8N3U4 1231 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 PIM2Q9P1W9 311 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.66□□□□□ -0.38
HIPK2-203ENST00000428878 BIN2Q9UBW5 565 aaPredicted RBP12.66□□□□□ -0.38
HIPK2-203ENST00000428878 NOL7Q9UMY1 257 aaKnown RBP12.66□□□□□ -0.38
HIPK2-203ENST00000428878 MAPK8IP1Q9UQF2 711 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 DAGLAQ9Y4D2 1042 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 SLC1A4P43007 532 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 CDK8P49336 464 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 UBXN2AP68543 259 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 PTPN21Q16825 1174 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 SLC10A5Q5PT55 438 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 TMTC2Q8N394 836 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 CNNM3Q8NE01 707 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 KLRF2D3W0D1 207 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 CCDC183Q5T5S1 534 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 COA7Q96BR5 231 aa12.66□□□□□ -0.38
HIPK2-203ENST00000428878 ARPP21Q9UBL0 812 aaPredicted RBP12.66□□□□□ -0.38
HIPK2-203ENST00000428878 NR1I2O75469 434 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 SP8Q8IXZ3 490 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 CDK5RAP3Q96JB5 506 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 CCDC93Q567U6 631 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 SAMD7Q7Z3H4 446 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 JMYQ8N9B5 988 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 OXER1Q8TDS5 423 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 ZNF592Q92610 1267 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 COA1Q9GZY4 146 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 RBSNQ9H1K0 784 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■■■■■ 40.5
HIPK2-203ENST00000428878 TM4SF1P30408 202 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 RASSF7Q02833 373 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 KIFC2Q96AC6 838 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 SERPINB13Q9UIV8 391 aa12.65□□□□□ -0.38
HIPK2-203ENST00000428878 TAL1P17542 331 aaPredicted RBP12.64□□□□□ -0.39
HIPK2-203ENST00000428878 RAD51AP2Q09MP3 1159 aa12.64□□□□□ -0.39
HIPK2-203ENST00000428878 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
HIPK2-203ENST00000428878 ATP8A2Q9NTI2 1148 aa12.64□□□□□ -0.39
HIPK2-203ENST00000428878 IBSPP21815 317 aaPredicted RBP12.64□□□□□ -0.39
HIPK2-203ENST00000428878 STX17P56962 302 aa12.64□□□□□ -0.39
HIPK2-203ENST00000428878 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
HIPK2-203ENST00000428878 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms