RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TNKSO95271 1327 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 GLTPD2A6NH11 291 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 IFIT3O14879 490 aaKnown RBP11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 ZYXQ15942 572 aaKnown RBP11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 ENAHQ8N8S7 591 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 IGDCC4Q8TDY8 1250 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 ZKSCAN4Q969J2 545 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 TEPSINQ96N21 525 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 SERPINB13Q9UIV8 391 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 TRDNQ13061 729 aa11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 TSGA10IPQ3SY00 556 aa11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 TMEM67Q5HYA8 995 aa11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 HSCBQ8IWL3 235 aa11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 LRRC47Q8N1G4 583 aaKnown RBP11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 DPF2Q92785 391 aa11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 IDI2Q9BXS1 227 aa11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 ZNF408Q9H9D4 720 aa11.22□□□□□ -0.61
HMGCLL1-206ENST00000428842 KLF18A0A0U1RQI7 1052 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 K7ELQ4 463 aaPredicted RBP11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 ST18O60284 1047 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 PLCG2P16885 1265 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 MCM5P33992 734 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 EPHX2P34913 555 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 RAB3GAP1Q15042 981 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 CEP95Q96GE4 821 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 LY9Q9HBG7 655 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 MYH8P13535 1937 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 TSPY3P0CV98 308 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 TSPY8P0CW00 308 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 INPP5BP32019 993 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 HDLBPQ00341 1268 aaKnown RBP11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 GABPAQ06546 454 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 SCRN1Q12765 414 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 RCSD1Q6JBY9 416 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 NFXL1Q6ZNB6 911 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 PGAP2Q9UHJ9 254 aa11.21□□□□□ -0.61
HMGCLL1-206ENST00000428842 MYO1BO43795 1136 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 HSP90AA1P07900 732 aaKnown RBP11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 VEGFAP15692 232 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 LMOD1P29536 600 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 CDC27P30260 824 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 ECE1P42892 770 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 SEPT2Q15019 361 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 SBK1Q52WX2 424 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 C16orf86Q6ZW13 317 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 USP48Q86UV5 1035 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 SPICE1Q8N0Z3 855 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 PHKBQ93100 1093 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 AIFM3Q96NN9 605 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 HPS5Q9UPZ3 1129 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 LAMA2P24043 3122 aaKnown RBP11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 SH2B2O14492 632 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 GH2P01242 217 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 TAL1P17542 331 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 RPS12P25398 132 aaKnown RBP11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 PSMA5P28066 241 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 GSE1Q14687 1217 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 TMOD2Q9NZR1 351 aa11.2□□□□□ -0.62
HMGCLL1-206ENST00000428842 GOLGA8BA8MQT2 603 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 ZBTB22O15209 634 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 PDIA3P30101 505 aaKnown RBP11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 PDE4BQ07343 736 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 BECN1Q14457 450 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 NBPF11Q86T75 865 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 ZNF444Q8N0Y2 327 aaPredicted RBP11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 ESR2Q92731 530 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 ZSCAN10Q96SZ4 725 aaPredicted RBP11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 NUP88Q99567 741 aaPredicted RBP11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 TM6SF1Q9BZW5 370 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 TAF1DQ9H5J8 278 aaPredicted RBP11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 CTDNEP1O95476 244 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 GUCY1A2P33402 732 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 KRT32Q14532 448 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 SEC23AQ15436 765 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 GIMAP6Q6P9H5 292 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 KRT26Q7Z3Y9 468 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 FAM151AQ8WW52 585 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 UBAC1Q9BSL1 405 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 ADARB2Q9NS39 739 aaKnown RBP11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 PI4KBQ9UBF8 816 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 LIMCH1Q9UPQ0 1083 aa11.19□□□□□ -0.62
HMGCLL1-206ENST00000428842 A0A1W2PRG0 241 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 SNAP25P60880 206 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 KIAA1755Q5JYT7 1200 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms