RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 TMOD4Q9NZQ9 345 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 SRRDQ9UH36 339 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 SERPINB13Q9UIV8 391 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 ZNF532Q9HCE3 1301 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 MKI67P46013 3256 aaKnown RBP12.31□□□□□ -0.44
COMMD1-202ENST00000427417 C19orf81C9J6K1 198 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 GDF11O95390 407 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 HMGCS2P54868 508 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 BACE1P56817 501 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 JAG1P78504 1218 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 TREML2Q5T2D2 321 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 ZSCAN25Q6NSZ9 544 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 RAET1EQ8TD07 263 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 HAUS7Q99871 368 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 ZBTB21Q9ULJ3 1066 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 MGAMO43451 1857 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 MYPNQ86TC9 1320 aa12.31□□□□□ -0.44
COMMD1-202ENST00000427417 USP17L10C9JJH3 530 aa12.3□□□□□ -0.44
COMMD1-202ENST00000427417 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
COMMD1-202ENST00000427417 GCLCP48506 637 aaPredicted RBP12.3□□□□□ -0.44
COMMD1-202ENST00000427417 MTMR2Q13614 643 aa12.3□□□□□ -0.44
COMMD1-202ENST00000427417 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
COMMD1-202ENST00000427417 DCTPP1Q9H773 170 aa12.3□□□□□ -0.44
COMMD1-202ENST00000427417 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
COMMD1-202ENST00000427417 LOC285556D6RIA3 1793 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 TCRBV5S4A2TA0A5A2 114 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
COMMD1-202ENST00000427417 ADD2P35612 726 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
COMMD1-202ENST00000427417 PRKCZQ05513 592 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 MTFR1Q15390 333 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 FAM110CQ1W6H9 321 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 CERKLQ49MI3 558 aaPredicted RBP12.29□□□□□ -0.44
COMMD1-202ENST00000427417 ANKRD13CQ8N6S4 541 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 CABP5Q9NP86 173 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 ECHDC1Q9NTX5 307 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 MCM9Q9NXL9 1143 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 GABRQQ9UN88 632 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 MYH1P12882 1939 aa12.29□□□□□ -0.44
COMMD1-202ENST00000427417 DOCK3Q8IZD9 2030 aa12.28□□□□□ -0.44
COMMD1-202ENST00000427417 TNPO2O14787 897 aaKnown RBP12.28□□□□□ -0.44
COMMD1-202ENST00000427417 GH2P01242 217 aa12.28□□□□□ -0.44
COMMD1-202ENST00000427417 HOXA7P31268 230 aaPredicted RBP12.28□□□□□ -0.44
COMMD1-202ENST00000427417 GRK4P32298 578 aa12.28□□□□□ -0.44
COMMD1-202ENST00000427417 RRP1P56182 461 aaKnown RBP12.28□□□□□ -0.44
COMMD1-202ENST00000427417 UBE3CQ15386 1083 aa12.28□□□□□ -0.44
COMMD1-202ENST00000427417 PRPF38BQ5VTL8 546 aaKnown RBP12.28□□□□□ -0.44
COMMD1-202ENST00000427417 AMOTL1Q8IY63 956 aa12.28□□□□□ -0.44
COMMD1-202ENST00000427417 SLAIN1Q8ND83 568 aa12.28□□□□□ -0.44
COMMD1-202ENST00000427417 COA7Q96BR5 231 aa12.28□□□□□ -0.44
COMMD1-202ENST00000427417 EDC3Q96F86 508 aaKnown RBP12.28□□□□□ -0.44
COMMD1-202ENST00000427417 DDRGK1Q96HY6 314 aa12.28□□□□□ -0.44
COMMD1-202ENST00000427417 ASCC2Q9H1I8 757 aaPredicted RBP12.28□□□□□ -0.44
COMMD1-202ENST00000427417 ATP8A2Q9NTI2 1148 aa12.28□□□□□ -0.44
COMMD1-202ENST00000427417 PEX10O60683 326 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 MBD4O95243 580 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 PLCD1P51178 756 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 USP14P54578 494 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 UBXN2AP68543 259 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 RAB3GAP1Q15042 981 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 ABCB5Q2M3G0 1257 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L2Q6R6M4 530 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 LCORLQ8N3X6 602 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 GTF3C2Q8WUA4 911 aaPredicted RBP12.27□□□□□ -0.45
COMMD1-202ENST00000427417 SDR42E1Q8WUS8 393 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 FEZ1Q99689 392 aa12.27□□□□□ -0.45
COMMD1-202ENST00000427417 DCP1AQ9NPI6 582 aaPredicted RBP12.27□□□□□ -0.45
COMMD1-202ENST00000427417 SHMT1P34896 483 aa12.26□□□□□ -0.45
COMMD1-202ENST00000427417 EVX2Q03828 476 aa12.26□□□□□ -0.45
COMMD1-202ENST00000427417 GABPAQ06546 454 aa12.26□□□□□ -0.45
COMMD1-202ENST00000427417 LRRFIP1Q32MZ4 808 aaKnown RBP12.26□□□□□ -0.45
COMMD1-202ENST00000427417 SLFNL1Q499Z3 407 aa12.26□□□□□ -0.45
COMMD1-202ENST00000427417 ARMT1Q9H993 441 aa12.26□□□□□ -0.45
COMMD1-202ENST00000427417 BIN2Q9UBW5 565 aaPredicted RBP12.26□□□□□ -0.45
COMMD1-202ENST00000427417 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
COMMD1-202ENST00000427417 SWAP70Q9UH65 585 aa12.26□□□□□ -0.45
COMMD1-202ENST00000427417 NAV1Q8NEY1 1877 aa12.25□□□□□ -0.45
COMMD1-202ENST00000427417 FLT3LGP49771 235 aa12.25□□□□□ -0.45
COMMD1-202ENST00000427417 IRF5Q13568 498 aa12.25□□□□□ -0.45
COMMD1-202ENST00000427417 NKX2-3Q8TAU0 364 aa12.25□□□□□ -0.45
COMMD1-202ENST00000427417 PXYLP1Q8TE99 480 aa12.25□□□□□ -0.45
COMMD1-202ENST00000427417 SHISA4Q96DD7 197 aa12.25□□□□□ -0.45
COMMD1-202ENST00000427417 C12orf42Q96LP6 360 aa12.25□□□□□ -0.45
COMMD1-202ENST00000427417 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
COMMD1-202ENST00000427417 DDX60LQ5H9U9 1706 aaKnown RBP12.25□□□□□ -0.45
COMMD1-202ENST00000427417 MPHOSPH10O00566 681 aaKnown RBP12.24□□□□□ -0.45
COMMD1-202ENST00000427417 ERC2O15083 957 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 ADCY3O60266 1144 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 CHGBP05060 677 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 ZFYP08048 801 aaPredicted RBP12.24□□□□□ -0.45
COMMD1-202ENST00000427417 ELNP15502 786 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 HERVK_113P62684 666 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 KBTBD3Q8NAB2 608 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 GPRC5AQ8NFJ5 357 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 YTHDC1Q96MU7 727 aaKnown RBP12.24□□□□□ -0.45
COMMD1-202ENST00000427417 KIAA1683Q9H0B3 1180 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 MORF4L1Q9UBU8 362 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms