RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-208	ENST00000421689	UBE2Q2L	H0YL09	131 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	PRDM1	O75626	825 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	RASA1	P20936	1047 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	CAP2	P40123	477 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	TRDN	Q13061	729 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	RRP12	Q5JTH9	1297 aa	Known RBP	13.96	□□□□□ -0.17
CAST-208	ENST00000421689	PPP4R3CP	Q6ZMV5	832 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	MOB2	Q70IA6	237 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	ANKRD13A	Q8IZ07	590 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	KRT23	Q9C075	422 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	CABP5	Q9NP86	173 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	INCENP	Q9NQS7	918 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	GINM1	Q9NU53	330 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	CSAD	Q9Y600	493 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	TACC3	Q9Y6A5	838 aa		13.96	□□□□□ -0.17
CAST-208	ENST00000421689	RANBP6	O60518	1105 aa	Known RBP	13.95	□□□□□ -0.18
CAST-208	ENST00000421689	INPP5B	P32019	993 aa		13.95	□□□□□ -0.18
CAST-208	ENST00000421689	KRT32	Q14532	448 aa		13.95	□□□□□ -0.18
CAST-208	ENST00000421689	RRP1B	Q14684	758 aa	Known RBP	13.95	□□□□□ -0.18
CAST-208	ENST00000421689	ABCB5	Q2M3G0	1257 aa		13.95	□□□□□ -0.18
CAST-208	ENST00000421689	NOL9	Q5SY16	702 aa	Known RBP	13.95	□□□□□ -0.18
CAST-208	ENST00000421689	LDLRAD1	Q5T700	205 aa		13.95	□□□□□ -0.18
CAST-208	ENST00000421689	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.95	□□□□□ -0.18
CAST-208	ENST00000421689	RASEF	Q8IZ41	740 aa		13.95	□□□□□ -0.18
CAST-208	ENST00000421689	SCYL3	Q8IZE3	742 aa		13.95	□□□□□ -0.18
CAST-208	ENST00000421689	NCOA7	Q8NI08	942 aa		13.95	□□□□□ -0.18
CAST-208	ENST00000421689	ESR2	Q92731	530 aa		13.95	□□□□□ -0.18
CAST-208	ENST00000421689	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.95	□□□□□ -0.18
CAST-208	ENST00000421689	SNX14	Q9Y5W7	946 aa		13.95	□□□□□ -0.18
CAST-208	ENST00000421689	NEDD4	P46934	1319 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	MPHOSPH10	O00566	681 aa	Known RBP	13.94	□□□□□ -0.18
CAST-208	ENST00000421689	GDF11	O95390	407 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	ASNS	P08243	561 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	TSPY3	P0CV98	308 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	TSPY8	P0CW00	308 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	AKR1B1	P15121	316 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	APLP1	P51693	650 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	TFAP4	Q01664	338 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	VGLL4	Q14135	290 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	FAM47A	Q5JRC9	791 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	STOX1	Q6ZVD7	989 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	RALYL	Q86SE5	291 aa	Known RBP	13.94	□□□□□ -0.18
CAST-208	ENST00000421689	PICK1	Q9NRD5	415 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	TAF6L	Q9Y6J9	622 aa		13.94	□□□□□ -0.18
CAST-208	ENST00000421689	TSPY2	A6NKD2	308 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689		B4E1Z4	1266 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	GH2	P01242	217 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	HUNK	P57058	714 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	ANAPC15	P60006	121 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	TMEM179	Q6ZVK1	233 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	SAPCD2	Q86UD0	394 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	NEDD1	Q8NHV4	660 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	NEK1	Q96PY6	1258 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	C22orf23	Q9BZE7	217 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	ZBTB21	Q9ULJ3	1066 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	TLL2	Q9Y6L7	1015 aa		13.93	□□□□□ -0.18
CAST-208	ENST00000421689	GREB1L	Q9C091	1923 aa	Predicted RBP	13.93	□□□□□ -0.18
CAST-208	ENST00000421689	KDM4A	O75164	1064 aa		13.92	□□□□□ -0.18
CAST-208	ENST00000421689	JAG1	P78504	1218 aa		13.92	□□□□□ -0.18
CAST-208	ENST00000421689	SLC10A4	Q96EP9	437 aa		13.92	□□□□□ -0.18
CAST-208	ENST00000421689	CREBZF	Q9NS37	354 aa		13.92	□□□□□ -0.18
CAST-208	ENST00000421689	ZSWIM5	Q9P217	1185 aa		13.92	□□□□□ -0.18
CAST-208	ENST00000421689	ABT1	Q9ULW3	272 aa	Known RBP	13.92	□□□□□ -0.18
CAST-208	ENST00000421689	SNCAIP	Q9Y6H5	919 aa		13.92	□□□□□ -0.18
CAST-208	ENST00000421689	PLIN4	Q96Q06	1357 aa		13.92	□□□□□ -0.18
CAST-208	ENST00000421689	USP17L5	A8MUK1	530 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	HMGB1	P09429	215 aa	Known RBP	13.91	□□□□□ -0.18
CAST-208	ENST00000421689	PTPRA	P18433	802 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	PSMA5	P28066	241 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	GUCY1A2	P33402	732 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	MCM5	P33992	734 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	RBM25	P49756	843 aa	Known RBP	13.91	□□□□□ -0.18
CAST-208	ENST00000421689	SEPT2	Q15019	361 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	RAB3GAP1	Q15042	981 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	ADCK5	Q3MIX3	580 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	IQCA1	Q86XH1	822 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.91	□□□□□ -0.18
CAST-208	ENST00000421689	HHIPL1	Q96JK4	782 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	CLMN	Q96JQ2	1002 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	JAKMIP1	Q96N16	626 aa	Known RBP	13.91	□□□□□ -0.18
CAST-208	ENST00000421689	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
CAST-208	ENST00000421689	TBC1D2	Q9BYX2	928 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	KANSL2	Q9H9L4	492 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	ELP3	Q9H9T3	547 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	AS3MT	Q9HBK9	375 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	TCP11L1	Q9NUJ3	509 aa		13.91	□□□□□ -0.18
CAST-208	ENST00000421689	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.91	□□□□□ -0.18
CAST-208	ENST00000421689	PHIP	Q8WWQ0	1821 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	IGKV6D-41	A0A0C4DH26	115 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	C1QTNF8	P60827	252 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	PPAT	Q06203	517 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.9	□□□□□ -0.18
CAST-208	ENST00000421689	CCDC178	Q5BJE1	867 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	PPP4R3B	Q5MIZ7	849 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	RGMB	Q6NW40	437 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	ERO1B	Q86YB8	467 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	NKX2-3	Q8TAU0	364 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	IL17RA	Q96F46	866 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	TM6SF1	Q9BZW5	370 aa		13.9	□□□□□ -0.18
CAST-208	ENST00000421689	SPDYE5	A6NIY4	337 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms