RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 VGLL4Q14135 290 aa20.77■□□□□ 0.92
LINC00271-201ENST00000421378 RRP1BQ14684 758 aaKnown RBP20.77■□□□□ 0.92
LINC00271-201ENST00000421378 LDLRAD1Q5T700 205 aa20.77■□□□□ 0.92
LINC00271-201ENST00000421378 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.77■□□□□ 0.92
LINC00271-201ENST00000421378 SAPCD2Q86UD0 394 aa20.77■□□□□ 0.92
LINC00271-201ENST00000421378 ZNF444Q8N0Y2 327 aaPredicted RBP20.77■□□□□ 0.92
LINC00271-201ENST00000421378 CCDC17Q96LX7 622 aa20.77■□□□□ 0.92
LINC00271-201ENST00000421378 BACH2Q9BYV9 841 aa20.77■□□□□ 0.92
LINC00271-201ENST00000421378 TACC3Q9Y6A5 838 aa20.77■□□□□ 0.92
LINC00271-201ENST00000421378 ATAD5Q96QE3 1844 aa20.77■□□□□ 0.92
LINC00271-201ENST00000421378 UNCXA6NJT0 531 aa20.76■□□□□ 0.91
LINC00271-201ENST00000421378 HUNKP57058 714 aa20.76■□□□□ 0.91
LINC00271-201ENST00000421378 ABCB5Q2M3G0 1257 aa20.76■□□□□ 0.91
LINC00271-201ENST00000421378 RRP12Q5JTH9 1297 aaKnown RBP20.76■□□□□ 0.91
LINC00271-201ENST00000421378 SCYL3Q8IZE3 742 aa20.76■□□□□ 0.91
LINC00271-201ENST00000421378 CNNM2Q9H8M5 875 aa20.76■□□□□ 0.91
LINC00271-201ENST00000421378 ABT1Q9ULW3 272 aaKnown RBP20.76■□□□□ 0.91
LINC00271-201ENST00000421378 E7EWF7 191 aa20.76■□□□□ 0.91
LINC00271-201ENST00000421378 MPHOSPH10O00566 681 aaKnown RBP20.76■□□□□ 0.91
LINC00271-201ENST00000421378 ASNSP08243 561 aa20.76■□□□□ 0.91
LINC00271-201ENST00000421378 TRDNQ13061 729 aa20.76■□□□□ 0.91
LINC00271-201ENST00000421378 NOL9Q5SY16 702 aaKnown RBP20.76■□□□□ 0.91
LINC00271-201ENST00000421378 TLL2Q9Y6L7 1015 aa20.76■□□□□ 0.91
LINC00271-201ENST00000421378 RANBP6O60518 1105 aaKnown RBP20.75■□□□□ 0.91
LINC00271-201ENST00000421378 GH2P01242 217 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 TSPY3P0CV98 308 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 TSPY8P0CW00 308 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 AKR1B1P15121 316 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 ESR2Q92731 530 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 CLMNQ96JQ2 1002 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 KRT23Q9C075 422 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 UPF2Q9HAU5 1272 aaKnown RBP20.75■□□□□ 0.91
LINC00271-201ENST00000421378 CABP5Q9NP86 173 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 PICK1Q9NRD5 415 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 CREBZFQ9NS37 354 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 ZBTB21Q9ULJ3 1066 aa20.75■□□□□ 0.91
LINC00271-201ENST00000421378 TSPY2A6NKD2 308 aa20.74■□□□□ 0.91
LINC00271-201ENST00000421378 NT5C2P49902 561 aa20.74■□□□□ 0.91
LINC00271-201ENST00000421378 SHROOM1Q2M3G4 852 aaPredicted RBP20.74■□□□□ 0.91
LINC00271-201ENST00000421378 TSGA10IPQ3SY00 556 aa20.74■□□□□ 0.91
LINC00271-201ENST00000421378 STOX1Q6ZVD7 989 aa20.74■□□□□ 0.91
LINC00271-201ENST00000421378 RALYLQ86SE5 291 aaKnown RBP20.74■□□□□ 0.91
LINC00271-201ENST00000421378 KCNB2Q92953 911 aa20.74■□□□□ 0.91
LINC00271-201ENST00000421378 GINM1Q9NU53 330 aa20.74■□□□□ 0.91
LINC00271-201ENST00000421378 SNCAIPQ9Y6H5 919 aa20.74■□□□□ 0.91
LINC00271-201ENST00000421378 B4E1Z4 1266 aa20.73■□□□□ 0.91
LINC00271-201ENST00000421378 C1QTNF8P60827 252 aa20.73■□□□□ 0.91
LINC00271-201ENST00000421378 JAG1P78504 1218 aa20.73■□□□□ 0.91
LINC00271-201ENST00000421378 KRT32Q14532 448 aa20.73■□□□□ 0.91
LINC00271-201ENST00000421378 FAM47AQ5JRC9 791 aa20.73■□□□□ 0.91
LINC00271-201ENST00000421378 TMEM179Q6ZVK1 233 aa20.73■□□□□ 0.91
LINC00271-201ENST00000421378 NCOA7Q8NI08 942 aa20.73■□□□□ 0.91
LINC00271-201ENST00000421378 ELP3Q9H9T3 547 aa20.73■□□□□ 0.91
LINC00271-201ENST00000421378 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.73■□□□□ 0.91
LINC00271-201ENST00000421378 PLIN4Q96Q06 1357 aa20.73■□□□□ 0.91
LINC00271-201ENST00000421378 KDM4AO75164 1064 aa20.72■□□□□ 0.91
LINC00271-201ENST00000421378 TFAP4Q01664 338 aa20.72■□□□□ 0.91
LINC00271-201ENST00000421378 RAB3GAP1Q15042 981 aa20.72■□□□□ 0.91
LINC00271-201ENST00000421378 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.72■□□□□ 0.91
LINC00271-201ENST00000421378 SNX14Q9Y5W7 946 aa20.72■□□□□ 0.91
LINC00271-201ENST00000421378 GREB1LQ9C091 1923 aaPredicted RBP20.72■□□□□ 0.91
LINC00271-201ENST00000421378 SLC10A4Q96EP9 437 aa20.72■□□□□ 0.91
LINC00271-201ENST00000421378 PTPRAP18433 802 aa20.71■□□□□ 0.91
LINC00271-201ENST00000421378 NEDD1Q8NHV4 660 aa20.71■□□□□ 0.91
LINC00271-201ENST00000421378 HHIPL1Q96JK4 782 aa20.71■□□□□ 0.91
LINC00271-201ENST00000421378 SPDYE5A6NIY4 337 aa20.7■□□□□ 0.9
LINC00271-201ENST00000421378 GUCY1A2P33402 732 aa20.7■□□□□ 0.9
LINC00271-201ENST00000421378 SEPT2Q15019 361 aa20.7■□□□□ 0.9
LINC00271-201ENST00000421378 ADCK5Q3MIX3 580 aa20.7■□□□□ 0.9
LINC00271-201ENST00000421378 RGMBQ6NW40 437 aa20.7■□□□□ 0.9
LINC00271-201ENST00000421378 ERO1BQ86YB8 467 aa20.7■□□□□ 0.9
LINC00271-201ENST00000421378 NKX2-3Q8TAU0 364 aa20.7■□□□□ 0.9
LINC00271-201ENST00000421378 NEK1Q96PY6 1258 aa20.7■□□□□ 0.9
LINC00271-201ENST00000421378 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.7■□□□□ 0.9
LINC00271-201ENST00000421378 USP17L5A8MUK1 530 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 ZNF157P51786 506 aaPredicted RBP20.69■□□□□ 0.9
LINC00271-201ENST00000421378 ANAPC15P60006 121 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 ICA1Q05084 483 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 CCDC84Q86UT8 332 aaPredicted RBP20.69■□□□□ 0.9
LINC00271-201ENST00000421378 IQCA1Q86XH1 822 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 OPTNQ96CV9 577 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 OTUD5Q96G74 571 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 C22orf23Q9BZE7 217 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 KANSL2Q9H9L4 492 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 ZSWIM5Q9P217 1185 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 ZHX2Q9Y6X8 837 aa20.69■□□□□ 0.9
LINC00271-201ENST00000421378 PPATQ06203 517 aa20.68■□□□□ 0.9
LINC00271-201ENST00000421378 CLEC10AQ8IUN9 316 aa20.68■□□□□ 0.9
LINC00271-201ENST00000421378 MB21D2Q8IYB1 491 aaPredicted RBP20.68■□□□□ 0.9
LINC00271-201ENST00000421378 CNKSR2Q8WXI2 1034 aa20.68■□□□□ 0.9
LINC00271-201ENST00000421378 CEP95Q96GE4 821 aa20.68■□□□□ 0.9
LINC00271-201ENST00000421378 JAKMIP1Q96N16 626 aaKnown RBP20.68■□□□□ 0.9
LINC00271-201ENST00000421378 IGKV6D-41A0A0C4DH26 115 aa20.68■□□□□ 0.9
LINC00271-201ENST00000421378 NMT2O60551 498 aa20.68■□□□□ 0.9
LINC00271-201ENST00000421378 TBC1D2Q9BYX2 928 aa20.68■□□□□ 0.9
LINC00271-201ENST00000421378 AS3MTQ9HBK9 375 aa20.68■□□□□ 0.9
LINC00271-201ENST00000421378 PHIPQ8WWQ0 1821 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 RASSF10A6NK89 507 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 HMGB1P09429 215 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms