RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 FOXQ1Q9C009 403 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 LRRC4CQ9HCJ2 640 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 REV1Q9UBZ9 1251 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 LEMD3Q9Y2U8 911 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 HYAL3O43820 417 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 HTR3BO95264 441 aa7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 CST3P01034 146 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 PLCG1P19174 1290 aa7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 SPINK2P20155 84 aa7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 MCATQ8IVS2 390 aaKnown RBP7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 Q8N3U1 123 aa7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 NT5C1AQ9BXI3 368 aa7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 ZC3H7BQ9UGR2 993 aaKnown RBP7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 ADAM30Q9UKF2 790 aa7.56□□□□□ -1.2
HMGB1P49-201ENST00000418882 KIAA1324LA8MWY0 1029 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P49-201ENST00000418882 CYP26A1O43174 497 aa7.55□□□□□ -1.2
HMGB1P49-201ENST00000418882 CLCQ05315 142 aa7.55□□□□□ -1.2
HMGB1P49-201ENST00000418882 LRP8Q14114 963 aa7.55□□□□□ -1.2
HMGB1P49-201ENST00000418882 CPSF6Q16630 551 aaKnown RBP eCLIP7.55□□□□□ -1.2
HMGB1P49-201ENST00000418882 TMEM201Q5SNT2 666 aa7.55□□□□□ -1.2
HMGB1P49-201ENST00000418882 DUSP27Q5VZP5 1158 aa7.55□□□□□ -1.2
HMGB1P49-201ENST00000418882 MIPEPQ99797 713 aa7.55□□□□□ -1.2
HMGB1P49-201ENST00000418882 PCDHB14Q9Y5E9 798 aa7.55□□□□□ -1.2
HMGB1P49-201ENST00000418882 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 CHURC1-FNTBB4DL54 471 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 COBLO75128 1261 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 CYP27A1Q02318 531 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 PDE4BQ07343 736 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 APOBRQ0VD83 1088 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 CWF19L2Q2TBE0 894 aaKnown RBP7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 ARTNQ5T4W7 220 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 NFXL1Q6ZNB6 911 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 SLITRK4Q8IW52 837 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 GIMAP7Q8NHV1 300 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 ROBO2Q9HCK4 1378 aa7.54□□□□□ -1.2
HMGB1P49-201ENST00000418882 OXCT1P55809 520 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 PAK2Q13177 524 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 CYP27C1Q4G0S4 372 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 SLC6A19Q695T7 634 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 LETMD1Q6P1Q0 360 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 DTX1Q86Y01 620 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 PLD6Q8N2A8 252 aaKnown RBP7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 PPP1R13LQ8WUF5 828 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 ANTXR1Q9H6X2 564 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 IGSF5Q9NSI5 407 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 KLHL3Q9UH77 587 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 PLAGL2Q9UPG8 496 aa7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P49-201ENST00000418882 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 PRR33A8MZF0 331 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 ATE1O95260 518 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 TCF3P15923 654 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 TNNI2P48788 182 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 GK5Q6ZS86 529 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 WFDC3Q8IUB2 231 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 ZNF654Q8IZM8 581 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 MFSD2AQ8NA29 543 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 FAM13CQ8NE31 585 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 NKD1Q969G9 470 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 ACBD3Q9H3P7 528 aa7.52□□□□□ -1.21
HMGB1P49-201ENST00000418882 COL17A1Q9UMD9 1497 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P49-201ENST00000418882 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
HMGB1P49-201ENST00000418882 CDH24Q86UP0 819 aa7.51□□□□□ -1.21
HMGB1P49-201ENST00000418882 EHMT1Q9H9B1 1298 aa7.51□□□□□ -1.21
HMGB1P49-201ENST00000418882 SLC22A31A6NKX4 558 aa7.5□□□□□ -1.21
HMGB1P49-201ENST00000418882 ITIH2P19823 946 aa7.5□□□□□ -1.21
HMGB1P49-201ENST00000418882 GRIK1P39086 918 aa7.5□□□□□ -1.21
HMGB1P49-201ENST00000418882 OVOS1Q6IE37 1185 aa7.5□□□□□ -1.21
HMGB1P49-201ENST00000418882 SLFN12Q8IYM2 578 aa7.5□□□□□ -1.21
HMGB1P49-201ENST00000418882 ZFP64Q9NPA5 681 aa7.5□□□□□ -1.21
HMGB1P49-201ENST00000418882 PCMTD2Q9NV79 361 aa7.5□□□□□ -1.21
HMGB1P49-201ENST00000418882 MCM4P33991 863 aa7.49□□□□□ -1.21
HMGB1P49-201ENST00000418882 NKPD1Q17RQ9 610 aa7.49□□□□□ -1.21
HMGB1P49-201ENST00000418882 REXO1Q8N1G1 1221 aaKnown RBP7.49□□□□□ -1.21
HMGB1P49-201ENST00000418882 BAHD1Q8TBE0 780 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P49-201ENST00000418882 CYB5D2Q8WUJ1 264 aa7.49□□□□□ -1.21
HMGB1P49-201ENST00000418882 TGIF2Q9GZN2 237 aa7.49□□□□□ -1.21
HMGB1P49-201ENST00000418882 PRDM5Q9NQX1 630 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P49-201ENST00000418882 GINM1Q9NU53 330 aa7.49□□□□□ -1.21
HMGB1P49-201ENST00000418882 PPT2Q9UMR5 302 aa7.49□□□□□ -1.21
HMGB1P49-201ENST00000418882 IGF2BP3O00425 579 aaKnown RBP eCLIP7.48□□□□□ -1.21
HMGB1P49-201ENST00000418882 CEACAM5P06731 702 aa7.48□□□□□ -1.21
HMGB1P49-201ENST00000418882 POLR2BP30876 1174 aaKnown RBP7.48□□□□□ -1.21
HMGB1P49-201ENST00000418882 ARSHQ5FYA8 562 aa7.48□□□□□ -1.21
HMGB1P49-201ENST00000418882 DIEXFQ68CQ4 756 aaKnown RBP7.48□□□□□ -1.21
HMGB1P49-201ENST00000418882 SPACA3Q8IXA5 215 aa7.48□□□□□ -1.21
HMGB1P49-201ENST00000418882 TPX2Q9ULW0 747 aaKnown RBP7.48□□□□□ -1.21
HMGB1P49-201ENST00000418882 PRNPP04156 253 aa7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 CD96P40200 585 aa7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 GJA8P48165 433 aa7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 YARSP54577 528 aaKnown RBP7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 ZNF574Q6ZN55 896 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 GPRASP2Q96D09 838 aa7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 KIF2CQ99661 725 aa7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 TNKS2Q9H2K2 1166 aa7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 GMIPQ9P107 970 aa7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 CCDC39Q9UFE4 941 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms