RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 KRT9P35527 623 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 RNASE9P60153 205 aaKnown RBP13.22□□□□□ -0.29
DDR1-232ENST00000418800 ACTN3Q08043 901 aaPredicted RBP13.22□□□□□ -0.29
DDR1-232ENST00000418800 ZNF174Q15697 407 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDR1-232ENST00000418800 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
DDR1-232ENST00000418800 HELLSQ9NRZ9 838 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 CTNND2Q9UQB3 1225 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 COL15A1P39059 1388 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 PLEKHG2Q9H7P9 1386 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 LRRIQ3A6PVS8 624 aaPredicted RBP13.22□□□□□ -0.29
DDR1-232ENST00000418800 STX10O60499 249 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 E2F5Q15329 346 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 RPAINQ86UA6 219 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 MED23Q9ULK4 1368 aa13.22□□□□□ -0.29
DDR1-232ENST00000418800 TATP17735 454 aaPredicted RBP13.21□□□□□ -0.29
DDR1-232ENST00000418800 ATF3P18847 181 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 FOXP4Q8IVH2 680 aaPredicted RBP13.21□□□□□ -0.29
DDR1-232ENST00000418800 PLCD4Q9BRC7 762 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 MAN1B1Q9UKM7 699 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 TBC1D2BQ9UPU7 963 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.29
DDR1-232ENST00000418800 PTPRUQ92729 1446 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 GOLGA6BA6NDN3 693 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 IKBKBO14920 756 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 RPSAP08865 295 aaKnown RBP13.21□□□□□ -0.29
DDR1-232ENST00000418800 PIP4K2BP78356 416 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 LDHAL6AQ6ZMR3 332 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 TTLL7Q6ZT98 887 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.29
DDR1-232ENST00000418800 TRIM10Q9UDY6 481 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 ABCF2Q9UG63 623 aa13.21□□□□□ -0.29
DDR1-232ENST00000418800 USP42Q9H9J4 1324 aaKnown RBP13.21□□□□□ -0.29
DDR1-232ENST00000418800 GGCXP38435 758 aa13.21□□□□□ -0.3
DDR1-232ENST00000418800 UBXN1Q04323 297 aa13.21□□□□□ -0.3
DDR1-232ENST00000418800 NAA25Q14CX7 972 aa13.21□□□□□ -0.3
DDR1-232ENST00000418800 CCDC122Q5T0U0 273 aa13.21□□□□□ -0.3
DDR1-232ENST00000418800 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.3
DDR1-232ENST00000418800 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.32e-7■■■■□ 25.7
DDR1-232ENST00000418800 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.3
DDR1-232ENST00000418800 YY1AP1Q9H869 796 aa13.21□□□□□ -0.3
DDR1-232ENST00000418800 ANGEL1Q9UNK9 670 aaKnown RBP13.21□□□□□ -0.3
DDR1-232ENST00000418800 EXOSC10Q01780 885 aaKnown RBP13.2□□□□□ -0.3
DDR1-232ENST00000418800 TC2NQ8N9U0 490 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 MIGA1Q8NAN2 632 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 XAGE2Q96GT9 111 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 COPRSQ9NQ92 184 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
DDR1-232ENST00000418800 MYO1FO00160 1098 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 PRDM1O75626 825 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 ZMYM1Q5SVZ6 1142 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 RAD9BQ6WBX8 426 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 ANKZF1Q9H8Y5 726 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
DDR1-232ENST00000418800 ABL1P00519 1130 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 GCP02774 474 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 EPSTI1Q96J88 318 aa13.2□□□□□ -0.3
DDR1-232ENST00000418800 GNL3LQ9NVN8 582 aaKnown RBP13.2□□□□□ -0.3
DDR1-232ENST00000418800 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
DDR1-232ENST00000418800 HNRNPH1P31943 449 aaKnown RBP13.19□□□□□ -0.3
DDR1-232ENST00000418800 HPDP32754 393 aaPredicted RBP13.19□□□□□ -0.3
DDR1-232ENST00000418800 PEX19P40855 299 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 PDCLQ13371 301 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 UBAC1Q9BSL1 405 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 KAT14Q9H8E8 782 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 L1RE1Q9UN81 338 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 HOXB7P09629 217 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 IL15P40933 162 aaPredicted RBP13.19□□□□□ -0.3
DDR1-232ENST00000418800 RSRC2Q7L4I2 434 aaKnown RBP13.19□□□□□ -0.3
DDR1-232ENST00000418800 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 ANKRD18AQ8IVF6 992 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 AXIN2Q9Y2T1 843 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 PCDHB6Q9Y5E3 794 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 SNAP23O00161 211 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 SCARF1Q14162 830 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 TSGA10IPQ3SY00 556 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 ODF2Q5BJF6 829 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 N4BP2L2Q92802 583 aaPredicted RBP13.19□□□□□ -0.3
DDR1-232ENST00000418800 CAPS2Q9BXY5 557 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 MYO6Q9UM54 1294 aa13.19□□□□□ -0.3
DDR1-232ENST00000418800 EYA2O00167 538 aa13.18□□□□□ -0.3
DDR1-232ENST00000418800 SCP2P22307 547 aa13.18□□□□□ -0.3
DDR1-232ENST00000418800 CD248Q9HCU0 757 aa13.18□□□□□ -0.3
DDR1-232ENST00000418800 ATG3Q9NT62 314 aa13.18□□□□□ -0.3
DDR1-232ENST00000418800 EXOC5O00471 708 aa13.18□□□□□ -0.3
DDR1-232ENST00000418800 RANBP6O60518 1105 aaKnown RBP13.18□□□□□ -0.3
DDR1-232ENST00000418800 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
DDR1-232ENST00000418800 IFIT5Q13325 482 aaKnown RBP13.18□□□□□ -0.3
DDR1-232ENST00000418800 ZNHIT6Q9NWK9 470 aaKnown RBP13.18□□□□□ -0.3
DDR1-232ENST00000418800 PSD3Q9NYI0 1048 aa13.18□□□□□ -0.3
DDR1-232ENST00000418800 VPS54Q9P1Q0 977 aa13.18□□□□□ -0.3
DDR1-232ENST00000418800 SYNRGQ9UMZ2 1314 aa13.17□□□□□ -0.3
DDR1-232ENST00000418800 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
DDR1-232ENST00000418800 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
DDR1-232ENST00000418800 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms