RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 CRACR2BQ8N4Y2 399 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-206ENST00000417540 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
HDLBP-206ENST00000417540 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
HDLBP-206ENST00000417540 TRIM17Q9Y577 477 aa12.37□□□□□ -0.43
HDLBP-206ENST00000417540 FOXP2O15409 715 aa12.36□□□□□ -0.43
HDLBP-206ENST00000417540 CTNND1O60716 968 aaKnown RBP12.36□□□□□ -0.43
HDLBP-206ENST00000417540 GH2P01242 217 aa12.36□□□□□ -0.43
HDLBP-206ENST00000417540 HLA-DOAP06340 250 aa12.36□□□□□ -0.43
HDLBP-206ENST00000417540 GUCY1A2P33402 732 aa12.36□□□□□ -0.43
HDLBP-206ENST00000417540 ZYXQ15942 572 aaKnown RBP12.36□□□□□ -0.43
HDLBP-206ENST00000417540 ANKRD45Q5TZF3 282 aa12.36□□□□□ -0.43
HDLBP-206ENST00000417540 ANKRD23Q86SG2 305 aa12.36□□□□□ -0.43
HDLBP-206ENST00000417540 KBTBD3Q8NAB2 608 aa12.36□□□□□ -0.43
HDLBP-206ENST00000417540 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
HDLBP-206ENST00000417540 HERC5Q9UII4 1024 aaKnown RBP12.36□□□□□ -0.43
HDLBP-206ENST00000417540 PDE4DIPQ5VU43 2346 aa12.36□□□□□ -0.43
HDLBP-206ENST00000417540 ALDH1A1P00352 501 aa12.35□□□□□ -0.43
HDLBP-206ENST00000417540 GABPAQ06546 454 aa12.35□□□□□ -0.43
HDLBP-206ENST00000417540 SPP2Q13103 211 aa12.35□□□□□ -0.43
HDLBP-206ENST00000417540 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
HDLBP-206ENST00000417540 STK11IPQ8N1F8 1099 aa12.35□□□□□ -0.43
HDLBP-206ENST00000417540 GPATCH3Q96I76 525 aa12.35□□□□□ -0.43
HDLBP-206ENST00000417540 MCM9Q9NXL9 1143 aa12.35□□□□□ -0.43
HDLBP-206ENST00000417540 PI4KBQ9UBF8 816 aa12.35□□□□□ -0.43
HDLBP-206ENST00000417540 TTC41PQ6P2S7 1318 aa12.35□□□□□ -0.43
HDLBP-206ENST00000417540 ROBO3Q96MS0 1386 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 GPAA1O43292 621 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 AKR1B1P15121 316 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 NOM1Q5C9Z4 860 aaKnown RBP12.34□□□□□ -0.43
HDLBP-206ENST00000417540 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 ACER1Q8TDN7 264 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 EHD4Q9H223 541 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
HDLBP-206ENST00000417540 ZFYVE28Q9HCC9 887 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 SERPINB13Q9UIV8 391 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 PTCH2Q9Y6C5 1203 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 SLC4A4Q9Y6R1 1079 aa12.34□□□□□ -0.43
HDLBP-206ENST00000417540 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 TLR2O60603 784 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 POLR3DP05423 398 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-206ENST00000417540 BCRP11274 1271 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 PDE4AP27815 886 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 INHBEP58166 350 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 SP3Q02447 781 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 TATDN1Q6P1N9 297 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 C17orf99Q6UX52 265 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 ZNF280CQ8ND82 737 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 APPBP2Q92624 585 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 PARK7Q99497 189 aaKnown RBP12.33□□□□□ -0.44
HDLBP-206ENST00000417540 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.444e-7■□□□□ 9.9
HDLBP-206ENST00000417540 AGTPBP1Q9UPW5 1226 aa12.33□□□□□ -0.44
HDLBP-206ENST00000417540 USP17L5A8MUK1 530 aa12.32□□□□□ -0.44
HDLBP-206ENST00000417540 CXCL11O14625 94 aa12.32□□□□□ -0.44
HDLBP-206ENST00000417540 GLRX3O76003 335 aaKnown RBP12.32□□□□□ -0.44
HDLBP-206ENST00000417540 PDE1AP54750 535 aa12.32□□□□□ -0.44
HDLBP-206ENST00000417540 LACTBP83111 547 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-206ENST00000417540 SEPT2Q15019 361 aa12.32□□□□□ -0.44
HDLBP-206ENST00000417540 RAB3GAP1Q15042 981 aa12.32□□□□□ -0.44
HDLBP-206ENST00000417540 KIAA1755Q5JYT7 1200 aa12.32□□□□□ -0.44
HDLBP-206ENST00000417540 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
HDLBP-206ENST00000417540 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
HDLBP-206ENST00000417540 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
HDLBP-206ENST00000417540 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 GSG1L2A8MUP6 293 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 RNF113AO15541 343 aaKnown RBP12.31□□□□□ -0.44
HDLBP-206ENST00000417540 IGSF3O75054 1194 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 ASNSP08243 561 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 OTUD7BQ6GQQ9 843 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 FBXO46Q6PJ61 603 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-206ENST00000417540 ZNF589Q86UQ0 364 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-206ENST00000417540 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 STRBPQ96SI9 672 aaKnown RBP12.31□□□□□ -0.44
HDLBP-206ENST00000417540 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
HDLBP-206ENST00000417540 TACC3Q9Y6A5 838 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 ZNF236Q9UL36 1845 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 ALPK3Q96L96 1907 aa12.31□□□□□ -0.44
HDLBP-206ENST00000417540 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 USP17L21D6R901 530 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 MPHOSPH10O00566 681 aaKnown RBP12.3□□□□□ -0.44
HDLBP-206ENST00000417540 MYCP01106 439 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-206ENST00000417540 PRKCZQ05513 592 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 ABCB5Q2M3G0 1257 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 CERKLQ49MI3 558 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-206ENST00000417540 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 ZMYM1Q5SVZ6 1142 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 C16orf86Q6ZW13 317 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 RASGRP2Q7LDG7 609 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 SH3TC2Q8TF17 1288 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 FEZ1Q99689 392 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 ASCC2Q9H1I8 757 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-206ENST00000417540 IL25Q9H293 177 aa12.3□□□□□ -0.44
HDLBP-206ENST00000417540 EFCC1Q9HA90 598 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms