RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 CABP5Q9NP86 173 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 ARPP21Q9UBL0 812 aaPredicted RBP17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 SWAP70Q9UH65 585 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 MYH1P12882 1939 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 IGHDP01880 384 aa17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 PLCD1P51178 756 aa17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 NUCB1Q02818 461 aa17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 SPP2Q13103 211 aa17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 PABPC4Q13310 644 aaKnown RBP eCLIP17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 MOGSQ13724 837 aa17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 CERKLQ49MI3 558 aaPredicted RBP17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 WDR18Q9BV38 432 aa17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 PNMA3Q9UL41 463 aa17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 CASP8AP2Q9UKL3 1982 aa17.05■□□□□ 0.32
SLC13A3-205ENST00000417157 PRKAB2O43741 272 aa17.04■□□□□ 0.32
SLC13A3-205ENST00000417157 RRP1BQ14684 758 aaKnown RBP17.04■□□□□ 0.32
SLC13A3-205ENST00000417157 KIF22Q14807 665 aa17.04■□□□□ 0.32
SLC13A3-205ENST00000417157 ABCB5Q2M3G0 1257 aa17.04■□□□□ 0.32
SLC13A3-205ENST00000417157 SLFNL1Q499Z3 407 aa17.04■□□□□ 0.32
SLC13A3-205ENST00000417157 GIMAP6Q6P9H5 292 aa17.04■□□□□ 0.32
SLC13A3-205ENST00000417157 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.04■□□□□ 0.32
SLC13A3-205ENST00000417157 AGTPBP1Q9UPW5 1226 aa17.04■□□□□ 0.32
SLC13A3-205ENST00000417157 ATAD5Q96QE3 1844 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 C19orf81C9J6K1 198 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 GPAA1O43292 621 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 GH2P01242 217 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 CHGBP05060 677 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 GABPAQ06546 454 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 SH3D19Q5HYK7 790 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 GPAT2Q6NUI2 795 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 CCDC84Q86UT8 332 aaPredicted RBP17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 OSBP2Q969R2 916 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 STRBPQ96SI9 672 aaKnown RBP17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 TMOD4Q9NZQ9 345 aa17.03■□□□□ 0.32
SLC13A3-205ENST00000417157 USP17L10C9JJH3 530 aa17.02■□□□□ 0.32
SLC13A3-205ENST00000417157 SHMT1P34896 483 aa17.02■□□□□ 0.32
SLC13A3-205ENST00000417157 HMGCS2P54868 508 aa17.02■□□□□ 0.32
SLC13A3-205ENST00000417157 BACE1P56817 501 aa17.02■□□□□ 0.32
SLC13A3-205ENST00000417157 MTMR2Q13614 643 aa17.02■□□□□ 0.32
SLC13A3-205ENST00000417157 C12orf60Q5U649 245 aa17.02■□□□□ 0.32
SLC13A3-205ENST00000417157 SMCR8Q8TEV9 937 aaPredicted RBP17.02■□□□□ 0.32
SLC13A3-205ENST00000417157 NACAP1Q9BZK3 213 aa17.02■□□□□ 0.32
SLC13A3-205ENST00000417157 TRIM17Q9Y577 477 aa17.02■□□□□ 0.32
SLC13A3-205ENST00000417157 PHIPQ8WWQ0 1821 aa17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 USP17L12C9JPN9 530 aa17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 USP17L21D6R901 530 aa17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 RAB3GAP1Q15042 981 aa17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 ZMYM1Q5SVZ6 1142 aa17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 FBXO46Q6PJ61 603 aaPredicted RBP17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 CD99L2Q8TCZ2 262 aa17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 FEZ1Q99689 392 aa17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 OSBPL3Q9H4L5 887 aa17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 EFCC1Q9HA90 598 aa17.01■□□□□ 0.31
SLC13A3-205ENST00000417157 ADGRA2Q96PE1 1338 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 TRIM6-TRIM34B2RNG4 842 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 M0R2C6 588 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 MPHOSPH10O00566 681 aaKnown RBP17■□□□□ 0.31
SLC13A3-205ENST00000417157 CAPN15O75808 1086 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 GNRH1P01148 92 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 APPP05067 770 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 OSBPP22059 807 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 TDO2P48775 406 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 USP14P54578 494 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 C17orf99Q6UX52 265 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 CCDC17Q96LX7 622 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 ZNF287Q9HBT7 754 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 LOC285556D6RIA3 1793 aa17■□□□□ 0.31
SLC13A3-205ENST00000417157 GSG1L2A8MUP6 293 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 CYP2C8P10632 490 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 CYP2D6P10635 497 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 LACTBP83111 547 aaPredicted RBP16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 SBK1Q52WX2 424 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 CTR9Q6PD62 1173 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 USP17L2Q6R6M4 530 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 TMEM179Q6ZVK1 233 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 C16orf86Q6ZW13 317 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 OTOP1Q7RTM1 612 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 CPA4Q9UI42 421 aa16.99■□□□□ 0.31
SLC13A3-205ENST00000417157 PATL2C9JE40 543 aaKnown RBP16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 IRX3P78415 501 aaPredicted RBP16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 JAG1P78504 1218 aa16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 TREML2Q5T2D2 321 aa16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 PLEKHM2Q8IWE5 1019 aa16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 DYNLL2Q96FJ2 89 aa16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 SH2D4AQ9H788 454 aa16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 ROBO3Q96MS0 1386 aa16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 PTPRFP10586 1907 aa16.98■□□□□ 0.31
SLC13A3-205ENST00000417157 CCDC85CA6NKD9 419 aa16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 GCLCP48506 637 aaPredicted RBP16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 CDK8P49336 464 aa16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 PRMT2P55345 433 aa16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 SHROOM1Q2M3G4 852 aaPredicted RBP16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 RILPL2Q969X0 211 aa16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 C12orf42Q96LP6 360 aa16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 KIAA1683Q9H0B3 1180 aa16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 NAPBQ9H115 298 aa16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 HPS5Q9UPZ3 1129 aa16.97■□□□□ 0.31
SLC13A3-205ENST00000417157 CYP2D7A0A087X1C5 515 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms