RNA–Protein interactions for RNA: ENST00000416469.6

SMIM19-202, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM19, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-202ENST00000416469 NKX2-3Q8TAU0 364 aa22.32■■□□□ 1.16
SMIM19-202ENST00000416469 ASCC2Q9H1I8 757 aaPredicted RBP22.32■■□□□ 1.16
SMIM19-202ENST00000416469 COG6Q9Y2V7 657 aa22.32■■□□□ 1.16
SMIM19-202ENST00000416469 NAV1Q8NEY1 1877 aa22.32■■□□□ 1.16
SMIM19-202ENST00000416469 DDX60LQ5H9U9 1706 aaKnown RBP22.31■■□□□ 1.16
SMIM19-202ENST00000416469 CEP290O15078 2479 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 HMMRO75330 724 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 GDF11O95390 407 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 GJB1P08034 283 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 USP5P45974 858 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 SHROOM1Q2M3G4 852 aaPredicted RBP22.31■■□□□ 1.16
SMIM19-202ENST00000416469 PXYLP1Q8TE99 480 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 COA7Q96BR5 231 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 RNF208Q9H0X6 261 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 ZBTB40Q9NUA8 1239 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 TMOD4Q9NZQ9 345 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 ZBTB21Q9ULJ3 1066 aa22.31■■□□□ 1.16
SMIM19-202ENST00000416469 GJA8P48165 433 aa22.3■■□□□ 1.16
SMIM19-202ENST00000416469 TTF1Q15361 905 aaPredicted RBP22.3■■□□□ 1.16
SMIM19-202ENST00000416469 CLASRPQ8N2M8 674 aaKnown RBP22.3■■□□□ 1.16
SMIM19-202ENST00000416469 KIF1BPQ96EK5 621 aa22.3■■□□□ 1.16
SMIM19-202ENST00000416469 C19orf81C9J6K1 198 aa22.29■■□□□ 1.16
SMIM19-202ENST00000416469 APBB1O00213 710 aa22.29■■□□□ 1.16
SMIM19-202ENST00000416469 ELNP15502 786 aa22.29■■□□□ 1.16
SMIM19-202ENST00000416469 SIRT2Q8IXJ6 389 aa22.29■■□□□ 1.16
SMIM19-202ENST00000416469 UNC93B1Q9H1C4 597 aa22.29■■□□□ 1.16
SMIM19-202ENST00000416469 USP17L10C9JJH3 530 aa22.28■■□□□ 1.16
SMIM19-202ENST00000416469 INHAP05111 366 aa22.28■■□□□ 1.16
SMIM19-202ENST00000416469 HOXA7P31268 230 aaPredicted RBP22.28■■□□□ 1.16
SMIM19-202ENST00000416469 IRX3P78415 501 aaPredicted RBP22.28■■□□□ 1.16
SMIM19-202ENST00000416469 EHD4Q9H223 541 aa22.28■■□□□ 1.16
SMIM19-202ENST00000416469 PLXNB2O15031 1838 aa22.28■■□□□ 1.16
SMIM19-202ENST00000416469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.27■■□□□ 1.16
SMIM19-202ENST00000416469 RIOK1Q9BRS2 568 aaKnown RBP22.27■■□□□ 1.16
SMIM19-202ENST00000416469 CHMP4BQ9H444 224 aaKnown RBP22.27■■□□□ 1.16
SMIM19-202ENST00000416469 MORF4L1Q9UBU8 362 aa22.27■■□□□ 1.16
SMIM19-202ENST00000416469 SERPINB13Q9UIV8 391 aa22.27■■□□□ 1.16
SMIM19-202ENST00000416469 RCAN3Q9UKA8 241 aa22.27■■□□□ 1.16
SMIM19-202ENST00000416469 IFIT2P09913 472 aaKnown RBP22.26■■□□□ 1.15
SMIM19-202ENST00000416469 PDE6AP16499 860 aa22.26■■□□□ 1.15
SMIM19-202ENST00000416469 TATDN1Q6P1N9 297 aa22.26■■□□□ 1.15
SMIM19-202ENST00000416469 TTC6Q86TZ1 520 aa22.26■■□□□ 1.15
SMIM19-202ENST00000416469 U2AF1L4Q8WU68 220 aaKnown RBP22.26■■□□□ 1.15
SMIM19-202ENST00000416469 TAOK2Q9UL54 1235 aa22.26■■□□□ 1.15
SMIM19-202ENST00000416469 MAGEB6P1A0A0J9YX57 407 aa22.25■■□□□ 1.15
SMIM19-202ENST00000416469 RAB11FIP3O75154 756 aa22.25■■□□□ 1.15
SMIM19-202ENST00000416469 GH2P01242 217 aa22.25■■□□□ 1.15
SMIM19-202ENST00000416469 HABP4Q5JVS0 413 aaKnown RBP22.25■■□□□ 1.15
SMIM19-202ENST00000416469 SLC9C2Q5TAH2 1124 aa22.25■■□□□ 1.15
SMIM19-202ENST00000416469 UBE2Q1Q7Z7E8 422 aa22.25■■□□□ 1.15
SMIM19-202ENST00000416469 DNAJC2Q99543 621 aaKnown RBP22.25■■□□□ 1.15
SMIM19-202ENST00000416469 P2RX7Q99572 595 aaKnown RBP22.25■■□□□ 1.15
SMIM19-202ENST00000416469 MYH7P12883 1935 aa22.25■■□□□ 1.15
SMIM19-202ENST00000416469 HERVK_113P62684 666 aa22.24■■□□□ 1.15
SMIM19-202ENST00000416469 USP17L2Q6R6M4 530 aa22.24■■□□□ 1.15
SMIM19-202ENST00000416469 MYH8P13535 1937 aa22.23■■□□□ 1.15
SMIM19-202ENST00000416469 GOLIM4O00461 696 aa22.23■■□□□ 1.15
SMIM19-202ENST00000416469 SGPL1O95470 568 aa22.23■■□□□ 1.15
SMIM19-202ENST00000416469 BCL11AQ9H165 835 aa22.23■■□□□ 1.15
SMIM19-202ENST00000416469 EMILIN3Q9NT22 766 aa22.23■■□□□ 1.15
SMIM19-202ENST00000416469 ZNF532Q9HCE3 1301 aa22.23■■□□□ 1.15
SMIM19-202ENST00000416469 PLCD1P51178 756 aa22.22■■□□□ 1.15
SMIM19-202ENST00000416469 CERKLQ49MI3 558 aaPredicted RBP22.22■■□□□ 1.15
SMIM19-202ENST00000416469 GPRC5AQ8NFJ5 357 aa22.22■■□□□ 1.15
SMIM19-202ENST00000416469 CRNKL1Q9BZJ0 848 aaKnown RBP22.22■■□□□ 1.15
SMIM19-202ENST00000416469 TXNRD2Q9NNW7 524 aa22.22■■□□□ 1.15
SMIM19-202ENST00000416469 GJD2Q9UKL4 321 aa22.22■■□□□ 1.15
SMIM19-202ENST00000416469 TCRBV5S4A2TA0A5A2 114 aa22.21■■□□□ 1.15
SMIM19-202ENST00000416469 H0YGN5 161 aa22.21■■□□□ 1.15
SMIM19-202ENST00000416469 FARP2O94887 1054 aaPredicted RBP22.21■■□□□ 1.15
SMIM19-202ENST00000416469 SHMT1P34896 483 aa22.21■■□□□ 1.15
SMIM19-202ENST00000416469 ABCB5Q2M3G0 1257 aa22.21■■□□□ 1.15
SMIM19-202ENST00000416469 C12orf42Q96LP6 360 aa22.21■■□□□ 1.15
SMIM19-202ENST00000416469 FEZ1Q99689 392 aa22.21■■□□□ 1.15
SMIM19-202ENST00000416469 PAK6Q9NQU5 681 aaPredicted RBP22.21■■□□□ 1.15
SMIM19-202ENST00000416469 BAZ2AQ9UIF9 1905 aaKnown RBP22.2■■□□□ 1.14
SMIM19-202ENST00000416469 PEX10O60683 326 aa22.2■■□□□ 1.14
SMIM19-202ENST00000416469 HMGCRP04035 888 aa22.2■■□□□ 1.14
SMIM19-202ENST00000416469 POLR3DP05423 398 aaPredicted RBP22.2■■□□□ 1.14
SMIM19-202ENST00000416469 CAPN2P17655 700 aa22.2■■□□□ 1.14
SMIM19-202ENST00000416469 RAB3GAP1Q15042 981 aa22.2■■□□□ 1.14
SMIM19-202ENST00000416469 GTF3C2Q8WUA4 911 aaPredicted RBP22.2■■□□□ 1.14
SMIM19-202ENST00000416469 DPF3Q92784 378 aa22.2■■□□□ 1.14
SMIM19-202ENST00000416469 EDC3Q96F86 508 aaKnown RBP22.2■■□□□ 1.14
SMIM19-202ENST00000416469 DEFB118Q96PH6 123 aa22.2■■□□□ 1.14
SMIM19-202ENST00000416469 HTATIP2Q9BUP3 242 aa22.2■■□□□ 1.14
SMIM19-202ENST00000416469 PAG1Q9NWQ8 432 aa22.2■■□□□ 1.14
SMIM19-202ENST00000416469 RBPJLQ9UBG7 517 aa22.2■■□□□ 1.14
SMIM19-202ENST00000416469 USP14P54578 494 aa22.19■■□□□ 1.14
SMIM19-202ENST00000416469 PDE3AQ14432 1141 aa22.19■■□□□ 1.14
SMIM19-202ENST00000416469 ZYXQ15942 572 aaKnown RBP22.19■■□□□ 1.14
SMIM19-202ENST00000416469 C20orf194Q5TEA3 1177 aa22.19■■□□□ 1.14
SMIM19-202ENST00000416469 LCORLQ8N3X6 602 aa22.19■■□□□ 1.14
SMIM19-202ENST00000416469 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.19■■□□□ 1.14
SMIM19-202ENST00000416469 CABP5Q9NP86 173 aa22.19■■□□□ 1.14
SMIM19-202ENST00000416469 MCM9Q9NXL9 1143 aa22.19■■□□□ 1.14
SMIM19-202ENST00000416469 TFRCP02786 760 aaKnown RBP22.18■■□□□ 1.14
SMIM19-202ENST00000416469 ATP5JP18859 108 aa22.18■■□□□ 1.14
SMIM19-202ENST00000416469 ERVK-9P63128 1117 aa22.18■■□□□ 1.14
SMIM19-202ENST00000416469 ERVK-24P63145 666 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms