RNA–Protein interactions for RNA: ENST00000415624.5

TRAPPC12-204, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS ALT2 TSL 5

Gene TRAPPC12, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-204ENST00000415624 FAM155AB1AL88 458 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC12-204ENST00000415624 EPB41L2O43491 1005 aaKnown RBP12.98□□□□□ -0.33
TRAPPC12-204ENST00000415624 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
TRAPPC12-204ENST00000415624 PRDM1O75626 825 aa12.98□□□□□ -0.33
TRAPPC12-204ENST00000415624 TTC6Q86TZ1 520 aa12.98□□□□□ -0.33
TRAPPC12-204ENST00000415624 ZNF408Q9H9D4 720 aa12.98□□□□□ -0.33
TRAPPC12-204ENST00000415624 TACC3Q9Y6A5 838 aa12.98□□□□□ -0.33
TRAPPC12-204ENST00000415624 E7EWF7 191 aa12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 STAG1Q8WVM7 1258 aa12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 JAKMIP1Q96N16 626 aaKnown RBP12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 TEPSINQ96N21 525 aa12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 DHX36Q9H2U1 1008 aaKnown RBP12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 DNAJC18Q9H819 358 aa12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 INCENPQ9NQS7 918 aa12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 ANAPC4Q9UJX5 808 aa12.97□□□□□ -0.33
TRAPPC12-204ENST00000415624 B4E1Z4 1266 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 RBM25P49756 843 aaKnown RBP12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 KIF23Q02241 960 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 ADCK5Q3MIX3 580 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 AKNAD1Q5T1N1 836 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 C16orf86Q6ZW13 317 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 MIGA2Q7L4E1 593 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 RALYLQ86SE5 291 aaKnown RBP12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 CDCA5Q96FF9 252 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 PGAP2Q9UHJ9 254 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 SERPINB13Q9UIV8 391 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 FZD1Q9UP38 647 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 PPP2R3BQ9Y5P8 575 aa12.96□□□□□ -0.33
TRAPPC12-204ENST00000415624 CPA1P15085 419 aa12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 CASTP20810 708 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 CDK8P49336 464 aa12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 HUNKP57058 714 aa12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 GABPAQ06546 454 aa12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 PRKG1Q13976 671 aa12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 MFSD6Q6ZSS7 791 aa12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 NKX2-3Q8TAU0 364 aa12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 EHD4Q9H223 541 aa12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 RNF41Q9H4P4 317 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■■ 28.1
TRAPPC12-204ENST00000415624 PI4KBQ9UBF8 816 aa12.95□□□□□ -0.34
TRAPPC12-204ENST00000415624 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 GDF11O95390 407 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 RASA1P20936 1047 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 SHMT1P34896 483 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 PDE4BQ07343 736 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 TRDNQ13061 729 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 KRT32Q14532 448 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 SHROOM1Q2M3G4 852 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 NCOA7Q8NI08 942 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 KCNB2Q92953 911 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 TCEANC2Q96MN5 208 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 MKNK2Q9HBH9 465 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
TRAPPC12-204ENST00000415624 KIAA0100Q14667 2235 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 PHIPQ8WWQ0 1821 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 MPHOSPH10O00566 681 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 KDM4AO75164 1064 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 ANAPC15P60006 121 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 RGMBQ6NW40 437 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 CDC37L1Q7L3B6 337 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 CHST3Q7LGC8 479 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 CLEC10AQ8IUN9 316 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 MB21D2Q8IYB1 491 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 NEK1Q96PY6 1258 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-204ENST00000415624 TSPY2A6NKD2 308 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 ORC4O43929 436 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 AKR1B1P15121 316 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 NF2P35240 595 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 DCAF15Q66K64 600 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 CYB5R4Q7L1T6 521 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 ESR2Q92731 530 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 WRNIP1Q96S55 665 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 KIF2CQ99661 725 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 ZKSCAN3Q9BRR0 538 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 ZNF341Q9BYN7 854 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 LRRC2Q9BYS8 371 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 KRT23Q9C075 422 aa12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 HERC5Q9UII4 1024 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-204ENST00000415624 COL6A3P12111 3177 aa12.91□□□□□ -0.34
TRAPPC12-204ENST00000415624 PRC1O43663 620 aa12.91□□□□□ -0.34
TRAPPC12-204ENST00000415624 TSPY3P0CV98 308 aa12.91□□□□□ -0.34
TRAPPC12-204ENST00000415624 TSPY8P0CW00 308 aa12.91□□□□□ -0.34
TRAPPC12-204ENST00000415624 PCP11498 1178 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-204ENST00000415624 PSMA5P28066 241 aa12.91□□□□□ -0.34
TRAPPC12-204ENST00000415624 ANTXR2P58335 489 aa12.91□□□□□ -0.34
TRAPPC12-204ENST00000415624 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms