RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 GJA3Q9Y6H8 435 aa25.12■■□□□ 1.61
CEACAM3-203ENST00000415495 ATRNL1Q5VV63 1379 aa25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 WNT10BO00744 389 aa25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 ZBTB43O43298 467 aa25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 HLA-DOAP06340 250 aa25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 FKBP1CQ5VVH2 108 aa25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 RCSD1Q6JBY9 416 aa25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 ANKS1AQ92625 1134 aa25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 CHMP4CQ96CF2 233 aa25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 FAM217BQ9NTX9 383 aaPredicted RBP25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 SLC12A7Q9Y666 1083 aa25.11■■□□□ 1.61
CEACAM3-203ENST00000415495 COL2A1P02458 1487 aaPredicted RBP25.1■■□□□ 1.61
CEACAM3-203ENST00000415495 NID2Q14112 1375 aa25.1■■□□□ 1.61
CEACAM3-203ENST00000415495 CLRN2A0PK11 232 aa25.1■■□□□ 1.61
CEACAM3-203ENST00000415495 NEDD1Q8NHV4 660 aa25.1■■□□□ 1.61
CEACAM3-203ENST00000415495 SWAP70Q9UH65 585 aa25.1■■□□□ 1.61
CEACAM3-203ENST00000415495 NBPF9Q3BBW0 867 aa25.09■■□□□ 1.61
CEACAM3-203ENST00000415495 METTL16Q86W50 562 aaKnown RBP25.09■■□□□ 1.61
CEACAM3-203ENST00000415495 TMOD2Q9NZR1 351 aa25.09■■□□□ 1.61
CEACAM3-203ENST00000415495 PI4KBQ9UBF8 816 aa25.09■■□□□ 1.61
CEACAM3-203ENST00000415495 CNOT7Q9UIV1 285 aaKnown RBP25.09■■□□□ 1.61
CEACAM3-203ENST00000415495 BRD1O95696 1058 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 EGFRP00533 1210 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 SHMT1P34896 483 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 RCAN1P53805 252 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 IFIT1BQ5T764 474 aaKnown RBP25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 DGKHQ86XP1 1220 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 MICALL2Q8IY33 904 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 ZNF654Q8IZM8 581 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 MYL10Q9BUA6 226 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 TAOK2Q9UL54 1235 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 SIPA1L1O43166 1804 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 CNTNAP1P78357 1384 aa25.08■■□□□ 1.61
CEACAM3-203ENST00000415495 TCP10L2B9ZVM9 353 aa25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 TSPY3P0CV98 308 aa25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 TSPY8P0CW00 308 aa25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 RXRAP19793 462 aa25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 SYT1P21579 422 aa25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 CDC27P30260 824 aa25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 METAP2P50579 478 aaKnown RBP eCLIP25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 MICU3Q86XE3 530 aa25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 FOXP4Q8IVH2 680 aaPredicted RBP25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 FAM151AQ8WW52 585 aa25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 TNPO1Q92973 898 aaKnown RBP25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 DNAJC18Q9H819 358 aa25.08■■□□□ 1.6
CEACAM3-203ENST00000415495 DHX16O60231 1041 aaKnown RBP25.07■■□□□ 1.6
CEACAM3-203ENST00000415495 SLURP2P0DP57 97 aa25.07■■□□□ 1.6
CEACAM3-203ENST00000415495 ADD1P35611 737 aaKnown RBP25.07■■□□□ 1.6
CEACAM3-203ENST00000415495 CCDC178Q5BJE1 867 aa25.07■■□□□ 1.6
CEACAM3-203ENST00000415495 SYNE3Q6ZMZ3 975 aa25.07■■□□□ 1.6
CEACAM3-203ENST00000415495 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.07■■□□□ 1.6
CEACAM3-203ENST00000415495 PTPDC1A2A3K4 754 aa25.06■■□□□ 1.6
CEACAM3-203ENST00000415495 NOVP48745 357 aa25.06■■□□□ 1.6
CEACAM3-203ENST00000415495 ZSCAN29Q8IWY8 852 aaPredicted RBP25.06■■□□□ 1.6
CEACAM3-203ENST00000415495 GPC2Q8N158 579 aa25.06■■□□□ 1.6
CEACAM3-203ENST00000415495 GOLGA8AA7E2F4 631 aa25.05■■□□□ 1.6
CEACAM3-203ENST00000415495 PLIN4Q96Q06 1357 aa25.05■■□□□ 1.6
CEACAM3-203ENST00000415495 MYO1BO43795 1136 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 FDPSP14324 419 aaKnown RBP25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 HMGN5P82970 282 aaKnown RBP25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 TROAPQ12815 778 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 NTRK3Q16288 839 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 SAMD7Q7Z3H4 446 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 FAM83AQ86UY5 434 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 DDX11Q96FC9 970 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 RNF181Q9P0P0 153 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 PGAP2Q9UHJ9 254 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 STX6O43752 255 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 AKR1B1P15121 316 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 RBM26Q5T8P6 1007 aaKnown RBP25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 CCDC144CPQ8IYA2 1237 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 FANCBQ8NB91 859 aa25.04■■□□□ 1.6
CEACAM3-203ENST00000415495 IGKV6D-41A0A0C4DH26 115 aa25.03■■□□□ 1.6
CEACAM3-203ENST00000415495 LARP1BQ659C4 914 aaKnown RBP25.03■■□□□ 1.6
CEACAM3-203ENST00000415495 TATDN1Q6P1N9 297 aa25.03■■□□□ 1.6
CEACAM3-203ENST00000415495 CATIPQ7Z7H3 387 aa25.03■■□□□ 1.6
CEACAM3-203ENST00000415495 VEZTQ9HBM0 779 aa25.03■■□□□ 1.6
CEACAM3-203ENST00000415495 GPRC5DQ9NZD1 345 aa25.03■■□□□ 1.6
CEACAM3-203ENST00000415495 DDAH1O94760 285 aa25.02■■□□□ 1.6
CEACAM3-203ENST00000415495 RTN1Q16799 776 aa25.02■■□□□ 1.6
CEACAM3-203ENST00000415495 TBC1D10BQ4KMP7 808 aaPredicted RBP25.02■■□□□ 1.6
CEACAM3-203ENST00000415495 C9orf131Q5VYM1 1079 aa25.02■■□□□ 1.6
CEACAM3-203ENST00000415495 CLEC17AQ6ZS10 378 aa25.02■■□□□ 1.6
CEACAM3-203ENST00000415495 MTMR6Q9Y217 621 aa25.02■■□□□ 1.6
CEACAM3-203ENST00000415495 WDR33Q9C0J8 1336 aaKnown RBP25.02■■□□□ 1.6
CEACAM3-203ENST00000415495 FAM196BA6NMK8 535 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 CPLX1O14810 134 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 PDIA4P13667 645 aaKnown RBP25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 PDCP20941 246 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 PPP2R5BQ15173 497 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 NFKBIBQ15653 356 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 CRACR2BQ8N4Y2 399 aaPredicted RBP25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 NUP133Q8WUM0 1156 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 CCDC17Q96LX7 622 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 H7C1D1 291 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 PPFIA3O75145 1194 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 CALM1P0DP23 149 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 CALM2P0DP24 149 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 CALM3P0DP25 149 aa25.01■■□□□ 1.59
CEACAM3-203ENST00000415495 KIF4BQ2VIQ3 1234 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms