RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 PSRC1Q6PGN9 363 aaPredicted RBP7.81□□□□□ -1.16
LMBR1-204ENST00000415428 PLEKHH3Q7Z736 793 aa7.81□□□□□ -1.16
LMBR1-204ENST00000415428 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.81□□□□□ -1.16
LMBR1-204ENST00000415428 ZKSCAN4Q969J2 545 aaPredicted RBP7.81□□□□□ -1.16
LMBR1-204ENST00000415428 GPR108Q9NPR9 543 aa7.81□□□□□ -1.16
LMBR1-204ENST00000415428 MFSD5Q6N075 450 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 ERMP1Q7Z2K6 904 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 C8orf58Q8NAV2 365 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 GPRC5AQ8NFJ5 357 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 LPIN2Q92539 896 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 FANCMQ8IYD8 2048 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 ZKSCAN1P17029 563 aaPredicted RBP7.8□□□□□ -1.16
LMBR1-204ENST00000415428 BACE1P56817 501 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 PTPN11Q06124 597 aaPredicted RBP7.8□□□□□ -1.16
LMBR1-204ENST00000415428 USP17L2Q6R6M4 530 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 GPR142Q7Z601 462 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 USP38Q8NB14 1042 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 TMOD2Q9NZR1 351 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 DENND2AQ9ULE3 1009 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 GRM8O00222 908 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 IGSF5Q9NSI5 407 aa7.8□□□□□ -1.16
LMBR1-204ENST00000415428 DNAJC25-GNG10A0A024R161 153 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 ERVK-9P63128 1117 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 ERVK-24P63145 666 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 PPIGQ13427 754 aaKnown RBP eCLIP7.79□□□□□ -1.164e-7■■□□□ 13.8
LMBR1-204ENST00000415428 TREML2Q5T2D2 321 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 CATSPERGQ6ZRH7 1159 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 ATG9AQ7Z3C6 839 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 USP17L5A8MUK1 530 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 ANXA1P04083 346 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 PRKAR2AP13861 404 aaKnown RBP7.79□□□□□ -1.16
LMBR1-204ENST00000415428 FOSL2P15408 326 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 SP7Q8TDD2 431 aaPredicted RBP7.79□□□□□ -1.16
LMBR1-204ENST00000415428 MPHOSPH8Q99549 860 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 KATNBL1Q9H079 304 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 CLRN2A0PK11 232 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 PI4KAP2A4QPH2 592 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 VAMP4O75379 141 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 ZNF792Q3KQV3 632 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 SESTD1Q86VW0 696 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 PI4KAP1Q8N8J0 262 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 REPS2Q8NFH8 660 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 TACC3Q9Y6A5 838 aa7.79□□□□□ -1.16
LMBR1-204ENST00000415428 LAMA4Q16363 1823 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 CLTBP09497 229 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 FLIIQ13045 1269 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 CBX2Q14781 532 aaPredicted RBP7.78□□□□□ -1.16
LMBR1-204ENST00000415428 TMEM240Q5SV17 173 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 FOXP4Q8IVH2 680 aaPredicted RBP7.78□□□□□ -1.16
LMBR1-204ENST00000415428 MROH8Q9H579 483 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 PLIN4Q96Q06 1357 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 CTAGE5O15320 804 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 ST18O60284 1047 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 MFSD14CQ5VZR4 134 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 CCDC129Q6ZRS4 1044 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 C16orf59Q7L2K0 433 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 ZNF384Q8TF68 577 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 UHRF1Q96T88 793 aaPredicted RBP7.78□□□□□ -1.16
LMBR1-204ENST00000415428 FLRT1Q9NZU1 646 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 PATJQ8NI35 1801 aa7.78□□□□□ -1.16
LMBR1-204ENST00000415428 GLRX3O76003 335 aaKnown RBP7.77□□□□□ -1.16
LMBR1-204ENST00000415428 ELNP15502 786 aa7.77□□□□□ -1.16
LMBR1-204ENST00000415428 CCND3P30281 292 aaPredicted RBP7.77□□□□□ -1.16
LMBR1-204ENST00000415428 EPHA10Q5JZY3 1008 aa7.77□□□□□ -1.16
LMBR1-204ENST00000415428 FZD1Q9UP38 647 aa7.77□□□□□ -1.16
LMBR1-204ENST00000415428 RBM47A0AV96 593 aaKnown RBP7.77□□□□□ -1.17
LMBR1-204ENST00000415428 EIF2S2P20042 333 aaKnown RBP7.77□□□□□ -1.17
LMBR1-204ENST00000415428 HERVK_113P62684 666 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 MKRN3Q13064 507 aaKnown RBP7.77□□□□□ -1.17
LMBR1-204ENST00000415428 KRT24Q2M2I5 525 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 MYLIPQ8WY64 445 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 COPRSQ9NQ92 184 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 ZBED9Q6R2W3 1325 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 MICAL3Q7RTP6 2002 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 BAIAP3O94812 1187 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 CYP2C8P10632 490 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 GJA9P57773 515 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 FPGSQ05932 587 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 FAAP100Q0VG06 881 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 TMEM31Q5JXX7 168 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 SPTY2D1Q68D10 685 aaPredicted RBP7.77□□□□□ -1.17
LMBR1-204ENST00000415428 IL23AQ9NPF7 189 aa7.77□□□□□ -1.17
LMBR1-204ENST00000415428 CABYRO75952 493 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 ZNF865P0CJ78 1059 aaPredicted RBP7.76□□□□□ -1.17
LMBR1-204ENST00000415428 GABPAQ06546 454 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 TIFAQ96CG3 184 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 PLA2G6O60733 806 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 GRIN2CQ14957 1233 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 C9orf50Q5SZB4 431 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 NEK9Q8TD19 979 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 ZNF576Q9H609 170 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 PICK1Q9NRD5 415 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 KIAA1217Q5T5P2 1943 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 PARNO95453 639 aaKnown RBP7.76□□□□□ -1.17
LMBR1-204ENST00000415428 USP14P54578 494 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 TRIM32Q13049 653 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 LRRC41Q15345 812 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 TSPYL2Q9H2G4 693 aaPredicted RBP7.76□□□□□ -1.17
LMBR1-204ENST00000415428 MTCH2Q9Y6C9 303 aa7.76□□□□□ -1.17
LMBR1-204ENST00000415428 TCERG1O14776 1098 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 523.9 ms