RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.53
LINC01090-201ENST00000415357 TEX11Q8IYF3 940 aa11.71□□□□□ -0.53
LINC01090-201ENST00000415357 SH3RF3Q8TEJ3 882 aaPredicted RBP11.71□□□□□ -0.53
LINC01090-201ENST00000415357 HOOK2Q96ED9 719 aa11.71□□□□□ -0.53
LINC01090-201ENST00000415357 CRBNQ96SW2 442 aa11.71□□□□□ -0.53
LINC01090-201ENST00000415357 SPDYE5A6NIY4 337 aa11.7□□□□□ -0.54
LINC01090-201ENST00000415357 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
LINC01090-201ENST00000415357 DYNLL1P63167 89 aaKnown RBP11.7□□□□□ -0.54
LINC01090-201ENST00000415357 EDC3Q96F86 508 aaKnown RBP11.7□□□□□ -0.54
LINC01090-201ENST00000415357 DNAJC2Q99543 621 aaKnown RBP11.7□□□□□ -0.54
LINC01090-201ENST00000415357 PTPN18Q99952 460 aa11.7□□□□□ -0.54
LINC01090-201ENST00000415357 NOL10Q9BSC4 688 aaKnown RBP11.7□□□□□ -0.54
LINC01090-201ENST00000415357 KRTAP3-3Q9BYR6 98 aa11.7□□□□□ -0.54
LINC01090-201ENST00000415357 KRTAP3-2Q9BYR7 98 aa11.7□□□□□ -0.54
LINC01090-201ENST00000415357 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
LINC01090-201ENST00000415357 PCDHB15Q9Y5E8 787 aa11.7□□□□□ -0.54
LINC01090-201ENST00000415357 CCL15-CCL14A0A0B4J2E2 113 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 COL9A1P20849 921 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 CYP7A1P22680 504 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 CCL15Q16663 113 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 DMRTA1Q5VZB9 504 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 ERO1BQ86YB8 467 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 MAGEB6Q8N7X4 407 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 MIGA1Q8NAN2 632 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 ZNF296Q8WUU4 475 aaPredicted RBP11.69□□□□□ -0.54
LINC01090-201ENST00000415357 BRI3BPQ8WY22 251 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 LRRCC1Q9C099 1032 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 MCOLN1Q9GZU1 580 aa11.69□□□□□ -0.54
LINC01090-201ENST00000415357 OSBPL5Q9H0X9 879 aaPredicted RBP11.69□□□□□ -0.54
LINC01090-201ENST00000415357 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.69□□□□□ -0.54
LINC01090-201ENST00000415357 CDK5RAP2Q96SN8 1893 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 PHF20L1A8MW92 1017 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 PPP1R3GB7ZBB8 358 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 GPR25O00155 361 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 GOLIM4O00461 696 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 IRF6O14896 467 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 BAG3O95817 575 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 INHBEP58166 350 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 PPP4CP60510 307 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 PPIL2Q13356 520 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 DGKZQ13574 1117 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 MAPKAPK5Q8IW41 473 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 TGFBRAP1Q8WUH2 860 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 BOLA2Q9H3K6 86 aa11.68□□□□□ -0.54
LINC01090-201ENST00000415357 SIPA1L1O43166 1804 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 FLT1P17948 1338 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 MAP4K4O95819 1239 aaPredicted RBP11.67□□□□□ -0.54
LINC01090-201ENST00000415357 ALDH1A1P00352 501 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 GTF2A2P52657 109 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 MAP3K12Q12852 859 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 CRHR2Q13324 411 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 SLC4A8Q2Y0W8 1093 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 NOL9Q5SY16 702 aaKnown RBP11.67□□□□□ -0.54
LINC01090-201ENST00000415357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01090-201ENST00000415357 CCDC84Q86UT8 332 aaPredicted RBP11.67□□□□□ -0.54
LINC01090-201ENST00000415357 FAM43AQ8N2R8 423 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 ABHD8Q96I13 439 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 CFHR5Q9BXR6 569 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 DCTPP1Q9H773 170 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 COL2A1P02458 1487 aaPredicted RBP11.67□□□□□ -0.54
LINC01090-201ENST00000415357 FOCADQ5VW36 1801 aa11.67□□□□□ -0.54
LINC01090-201ENST00000415357 PDE6AP16499 860 aa11.66□□□□□ -0.54
LINC01090-201ENST00000415357 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC01090-201ENST00000415357 MAP3K10Q02779 954 aa11.66□□□□□ -0.54
LINC01090-201ENST00000415357 PPATQ06203 517 aa11.66□□□□□ -0.54
LINC01090-201ENST00000415357 SLFNL1Q499Z3 407 aa11.66□□□□□ -0.54
LINC01090-201ENST00000415357 TSHZ3Q63HK5 1081 aa11.66□□□□□ -0.54
LINC01090-201ENST00000415357 GPIHBP1Q8IV16 184 aa11.66□□□□□ -0.54
LINC01090-201ENST00000415357 SCYL3Q8IZE3 742 aa11.66□□□□□ -0.54
LINC01090-201ENST00000415357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC01090-201ENST00000415357 SAP30BPQ9UHR5 308 aaKnown RBP11.66□□□□□ -0.54
LINC01090-201ENST00000415357 DOCK1Q14185 1865 aa11.66□□□□□ -0.54
LINC01090-201ENST00000415357 BTBD19C9JJ37 291 aa11.65□□□□□ -0.54
LINC01090-201ENST00000415357 CHGBP05060 677 aa11.65□□□□□ -0.54
LINC01090-201ENST00000415357 ATP5JP18859 108 aa11.65□□□□□ -0.54
LINC01090-201ENST00000415357 SNAPC2Q13487 334 aa11.65□□□□□ -0.54
LINC01090-201ENST00000415357 RRP1BQ14684 758 aaKnown RBP11.65□□□□□ -0.54
LINC01090-201ENST00000415357 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.54
LINC01090-201ENST00000415357 SLC9C2Q5TAH2 1124 aa11.65□□□□□ -0.54
LINC01090-201ENST00000415357 OTUD7BQ6GQQ9 843 aa11.65□□□□□ -0.54
LINC01090-201ENST00000415357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC01090-201ENST00000415357 PAG1Q9NWQ8 432 aa11.65□□□□□ -0.54
LINC01090-201ENST00000415357 ZNF532Q9HCE3 1301 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 IGSF3O75054 1194 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 FKTNO75072 461 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 CETPP11597 493 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
LINC01090-201ENST00000415357 NOM1Q5C9Z4 860 aaKnown RBP11.64□□□□□ -0.55
LINC01090-201ENST00000415357 CTU1Q7Z7A3 348 aaKnown RBP11.64□□□□□ -0.55
LINC01090-201ENST00000415357 HAUS7Q99871 368 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 RIOK1Q9BRS2 568 aaKnown RBP11.64□□□□□ -0.55
LINC01090-201ENST00000415357 DNAJC18Q9H819 358 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 PICK1Q9NRD5 415 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 PALD1Q9ULE6 856 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 KCNH4Q9UQ05 1017 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 ZHX2Q9Y6X8 837 aa11.64□□□□□ -0.55
LINC01090-201ENST00000415357 HTTP42858 3142 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 MAGEB6P1A0A0J9YX57 407 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 TCRBV5S4A2TA0A5A2 114 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 CCDC85CA6NKD9 419 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms